mRNA_P-wetherbeei_contig6677.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: S8EP84_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EP84_9LAMI) HSP 1 Score: 92.4 bits (228), Expect = 1.730e-22 Identity = 58/102 (56.86%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 1 LGDLRWRSGLFPSRQWTLAPTACLPSCTPR---YSEF-----GSRPP-SPSSALPPRVITRRSTSIDFAENQLLPALIGLSPLATGHPLLLQQKWVRSSSAC 279
L DL RSGLFPSR W LAP + CT YS+F G + P SP SALP + RST IDFAENQL P L+GLSPLAT HP +L WVRSS AC
Sbjct: 2 LRDLSVRSGLFPSRLWILAPKKSV--CTNDLGLYSKFPWGCTGEQLPYSPLSALPRAIDIIRSTKIDFAENQLYPILVGLSPLATSHPRILPHTWVRSSKAC 101
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: K0YNP1_9ACTO (Uncharacterized protein n=1 Tax=Schaalia turicensis ACS-279-V-Col4 TaxID=883077 RepID=K0YNP1_9ACTO) HSP 1 Score: 75.9 bits (185), Expect = 4.410e-16 Identity = 45/91 (49.45%), Postives = 50/91 (54.95%), Query Frame = -3
Query: 20 WRTEPTSVAKAGDDLWLGVKGQSRPVIAGSPRNLLR*SV-------E*LPSGVEHWMG*GGASQTPNTEEYSSAGRQWVLRSIAERERAQI 271
WRTEPT V GD+LW+GVKGQS VIAGSPRN R SV E L W+ SQTPN S A R + + ERE AQI
Sbjct: 2 WRTEPTRVENLGDELWVGVKGQSNSVIAGSPRNAFRCSVVCCLVEVELLDGRWALWVT--DVSQTPNAIRLSMAVRLRGISFVVERETAQI 90
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A158T0E6_HAEIF (Uncharacterized protein n=1 Tax=Haemophilus influenzae TaxID=727 RepID=A0A158T0E6_HAEIF) HSP 1 Score: 73.6 bits (179), Expect = 2.990e-15 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 3
Query: 138 PEGNHSTLYLNRFRGEPAITGLDWPFTPSHRSSPAFATEVGSVLQCV 278
P+G S LYLNRFRGEPAI+ DWPFTPSH+SS F+T VGSVLQ V
Sbjct: 30 PKGVTSRLYLNRFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLV 76
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A0V0GJC4_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GJC4_SOLCH) HSP 1 Score: 72.8 bits (177), Expect = 1.830e-14 Identity = 37/54 (68.52%), Postives = 38/54 (70.37%), Query Frame = -3
Query: 110 WRTEPTSVAKAGDDLWLGVKGQSRPVIAGSPRNLLR*SVE*LPSGVEHWMG*GG 271
WRTEPT VAK GDDLWLGVKGQ R IAG PRNL + SV VEH MG GG
Sbjct: 5 WRTEPTYVAKYGDDLWLGVKGQPRSDIAGFPRNLFQXSVXCRWPEVEHSMGXGG 58
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A8J3XWD9_9ACTN (Uncharacterized protein n=1 Tax=Planotetraspora silvatica TaxID=234614 RepID=A0A8J3XWD9_9ACTN) HSP 1 Score: 68.9 bits (167), Expect = 1.450e-13 Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = -3
Query: 65 THWRTEPTSVAKAGDDLWLGVKGQSRPVIAGSPRNLLR*SVE*LPSGVEHWMG*GGASQTPNTEEYSSAGR 277
T WRTEPT V GDDL +GVKGQS VIAGSPRN R SV VE WM G + + + ++AG+
Sbjct: 4 TAWRTEPTRVENLGDDLCVGVKGQSNSVIAGSPRNAFRCSVACFLPEVELWMA-NGPYKVTDVSQTANAGK 73
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: E2S3A3_9CORY (Uncharacterized protein n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 TaxID=525264 RepID=E2S3A3_9CORY) HSP 1 Score: 66.2 bits (160), Expect = 1.720e-12 Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 3
Query: 120 PIQCSTPEGNHSTLYLNRFRGEPAITGLDWPFTPSHRSSPAFATEVGSVL 269
P+ P N +TL+LN FRGEPAIT DWPFTP+H SSP F+T VGS L
Sbjct: 14 PVALPPPSYN-TTLHLNAFRGEPAITEFDWPFTPTHSSSPQFSTYVGSRL 62
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A0B2R388_GLYSO (Putative mitochondrial protein n=1 Tax=Glycine soja TaxID=3848 RepID=A0A0B2R388_GLYSO) HSP 1 Score: 70.5 bits (171), Expect = 3.580e-12 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 115 PSPSSALPPRVITRRSTSIDFAENQLLPALIGLSPLATGHPLLLQQKWVRSSSA 276
PSP SALP + RST IDFAENQL P L+GLSPLAT HP +L WVRSS +
Sbjct: 279 PSPLSALPRAIDIMRSTEIDFAENQLYPILVGLSPLATSHPRILPHTWVRSSKS 332
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A2L2YX30_PARTP (Uncharacterized protein (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YX30_PARTP) HSP 1 Score: 60.5 bits (145), Expect = 2.100e-10 Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 3
Query: 138 PEGNHSTLYLNRFRGEPAITGLDWPFTPSHRSSPAFAT 251
P + +TL+LN FRGEPAIT DWPFTP+H SSP F T
Sbjct: 19 PPSSTTTLHLNAFRGEPAITEFDWPFTPTHNSSPQFLT 56
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A6A6K077_HEVBR (AB hydrolase-1 domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K077_HEVBR) HSP 1 Score: 64.7 bits (156), Expect = 3.790e-10 Identity = 30/53 (56.60%), Postives = 34/53 (64.15%), Query Frame = 3
Query: 93 FGVWLAPP*PIQCSTPEGNHSTLYLNRFRGEPAITGLDWPFTPSHRSSPAFAT 251
FG ++ P P P +TLYLNRFRGEPAI+ DWPFTPSH SS AT
Sbjct: 217 FGKRMSLPSPFSALPPATYSTTLYLNRFRGEPAISKFDWPFTPSHSSSNTIAT 269
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Match: A0A5N6L8P8_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6L8P8_9ROSI) HSP 1 Score: 60.1 bits (144), Expect = 1.490e-9 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = -2
Query: 120 RGERPIKAGNSWFSAKSIEVERRVITLGGRALDG 221
RGERPIK GNSWFSAK+IEV R+ T+GGRALDG
Sbjct: 91 RGERPIKPGNSWFSAKTIEVVPRMDTVGGRALDG 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6677.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6677.7.1 >prot_P-wetherbeei_contig6677.7.1 ID=prot_P-wetherbeei_contig6677.7.1|Name=mRNA_P-wetherbeei_contig6677.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp LGDLRWRSGLFPSRQWTLAPTACLPSCTPRYSEFGSRPPSPSSALPPRVIback to top mRNA from alignment at P-wetherbeei_contig6677:1459..1752+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6677.7.1 ID=mRNA_P-wetherbeei_contig6677.7.1|Name=mRNA_P-wetherbeei_contig6677.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig6677:1459..1752+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6677:1459..1752+ >mRNA_P-wetherbeei_contig6677.7.1 ID=mRNA_P-wetherbeei_contig6677.7.1|Name=mRNA_P-wetherbeei_contig6677.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig6677:1459..1752+ (Phaeothamnion wetherbeei SAG_119_79)back to top |