mRNA_P-wetherbeei_contig6667.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6667.1.1
Unique NamemRNA_P-wetherbeei_contig6667.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: W7TN53_9STRA (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA)

HSP 1 Score: 286 bits (733), Expect = 3.330e-94
Identity = 162/217 (74.65%), Postives = 188/217 (86.64%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQLTGAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MNL DRF RV KANLNS+LQ  EDPEK+LEQ+VEDMQ+DL+KIRQSYAEVSATQKRM+RQKEQA+ L++EWY RAQLAL+KGDE LAREAL+RRQQQ E  SSL  QM  QA AI  LF +MQQLEAKI+EAK+KKDQ+IARARTAKTS+KVNDMLSSV+GT+SMDAF+RM EKVE LE++AEVAGQL G +D SLE +F+LL  +SAVD EL +MK
Sbjct:   58 MNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMK 274
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A6H5KE64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KE64_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 2.110e-91
Identity = 155/217 (71.43%), Postives = 185/217 (85.25%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQLTGAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MNL DRF+RVAKANLN+ILQ WEDPEK+LEQ+VEDMQ+DLVKIRQSYAEVSATQKRM+RQK++AD+LA  WY+RAQLAL  GDE LAREAL RRQQQ +T+ S+ MQM+ Q  A+  L  +MQQLEAKI EAK +K+ LIARARTAKT+ +VNDML S+TGTTSMDAFDRM EKVE+LEA AE+AG+L+G+   SLE QF+ LEG++AVD EL +MK
Sbjct:   77 MNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQLDTSGSMGMQMDAQGQALDKLRDSMQQLEAKITEAKGQKETLIARARTAKTTTQVNDMLGSITGTTSMDAFDRMTEKVESLEANAEIAGELSGSTSVSLEGQFKALEGSNAVDNELAKMK 293
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A7S1TUY4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUY4_9STRA)

HSP 1 Score: 267 bits (682), Expect = 6.290e-86
Identity = 149/218 (68.35%), Postives = 183/218 (83.94%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSV-TGTTSMDAFDRMAEKVEALEAQAEVAGQLTGAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MNLG RF+RVAKANLNS++ +WEDPEKVL+Q+VE+M RDLVK+RQSYAEVSATQKR+++Q+EQA  LA EWY RAQLAL+KGDE LAREALTRRQQQ +T  +LA Q+E QA ++  L+ AM  LEA+INEAKA KDQL+ARARTAKT+ KVNDML +V  G+ SM AFDRMAEKV+ALEA+AE+ G+L G + GSLEQ+F+ LEG + VD EL ++K
Sbjct:  105 MNLGGRFLRVAKANLNSLISRWEDPEKVLDQTVEEMNRDLVKVRQSYAEVSATQKRLEKQREQAGALAEEWYKRAQLALSKGDEELAREALTRRQQQVDTEEALAGQIEGQAESVARLYDAMGALEARINEAKATKDQLVARARTAKTANKVNDMLGAVGDGSNSMSAFDRMAEKVDALEAEAEITGELAGTSGGSLEQKFKALEGGNKVDDELAKLK 322
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A836CIH9_9STRA (PspA/IM30 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH9_9STRA)

HSP 1 Score: 261 bits (666), Expect = 3.700e-84
Identity = 147/217 (67.74%), Postives = 182/217 (83.87%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQLTGAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MNL DRF+RVAKANLNS+LQK EDPEKVLEQ+V+DMQRDLVK+RQSYAEVSATQKRM+RQ+ +A+++A EWY RAQLAL KGDE LAREAL RRQ Q +  +++  QM+TQ  A+  L + MQ LEAKI EAK KKD LIARAR+AKT+Q VNDML++VTG++ M+AF+RM +KVEALE+ AEV+ QL+G A GSLEQQF  LEG++AVD+EL  ++
Sbjct:   54 MNLADRFMRVAKANLNSLLQKVEDPEKVLEQAVDDMQRDLVKVRQSYAEVSATQKRMERQRAEANRIAEEWYKRAQLALEKGDEGLAREALARRQTQVDIVATVGAQMDTQQQALDQLRSGMQALEAKITEAKGKKDALIARARSAKTTQNVNDMLNNVTGSSGMEAFERMQQKVEALESTAEVSAQLSGTAGGSLEQQFAALEGSTAVDKELAALR 270
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A7S2A8X3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8X3_TRICV)

HSP 1 Score: 253 bits (647), Expect = 2.890e-81
Identity = 144/225 (64.00%), Postives = 182/225 (80.89%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQ--------LTGAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MNL DRF RVAK+NLN++L+  EDPEK++ Q++EDMQ DLVKIRQSYAE++ATQ+R+ +QKEQAD L  +WYNRAQLAL KG+E LA+EAL RRQQQ ETA  LA Q++TQA ++  L+  MQ LEAKI EAK+KK+Q+IARARTA+++QKVNDMLS VTG+TSMDAF RM EKVE+LEA AEV+ +        L G+++  +E+QFR+LEG SAVD EL +MK
Sbjct:   44 MNLFDRFSRVAKSNLNNVLKNLEDPEKIMNQAIEDMQTDLVKIRQSYAEITATQRRLLKQKEQADALGEDWYNRAQLALQKGNESLAKEALNRRQQQVETAEGLAAQIDTQAASVDKLYEGMQALEAKILEAKSKKEQMIARARTAESTQKVNDMLSGVTGSTSMDAFTRMEEKVESLEASAEVSAEMGSVGGKALPGSSESDIEKQFRMLEGASAVDDELRKMK 268
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A7S3K4X7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4X7_9STRA)

HSP 1 Score: 248 bits (632), Expect = 5.570e-79
Identity = 147/219 (67.12%), Postives = 173/219 (79.00%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQLTGAADGSL--EQQFRLLEGTSAVDQELMRMK 651
            MN+ DRF RVAKAN+N++L KWEDPEKVL Q+VED+Q+DLVKIRQSYAEV ATQKRMQRQK+QA+ LA EWY RAQLAL   DE LAREAL+R+QQQ +  SSL  Q+  Q+ ++  L+ +MQ LE KI EAK+ KDQ IARARTAKT+ KVNDMLSSVTG+TSMDAF+RM EKVE LE +AEVAG+LT     S+  E +FR LE  S VD EL RMK
Sbjct:   50 MNIFDRFSRVAKANINNVLNKWEDPEKVLNQAVEDLQKDLVKIRQSYAEVMATQKRMQRQKDQAENLANEWYRRAQLALESDDEELAREALSRKQQQDDQISSLDDQIRLQSESLNKLYDSMQTLENKIAEAKSTKDQYIARARTAKTATKVNDMLSSVTGSTSMDAFERMKEKVEMLETEAEVAGELTQGTASSIDSETKFRQLEMGSKVDDELSRMK 268
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A8J2SJN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJN9_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.170e-77
Identity = 142/218 (65.14%), Postives = 176/218 (80.73%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQLT-GAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MN  DRF RVA+AN+N++L K EDPEKVL Q+VED+Q+DLV IRQSYAEV ATQKR QRQK+QADQLA EWY RAQLAL KGD+ LAREAL+R+QQQ + ++SL  Q+  Q++++  L+ +M  LE+KI+EA++ KDQ IARARTAKT+ KVNDMLSSV+GTTSMDAF+RM EKVE LE QAEV+GQL  GA    +E +F+ LE  S+VD EL +MK
Sbjct:   39 MNFFDRFKRVAEANINNVLGKMEDPEKVLNQAVEDLQKDLVTIRQSYAEVMATQKRQQRQKDQADQLADEWYRRAQLALEKGDDELAREALSRKQQQVDASTSLDEQIAIQSDSLSKLYDSMTALESKISEARSMKDQYIARARTAKTATKVNDMLSSVSGTTSMDAFERMKEKVEMLETQAEVSGQLQFGAGTADMESRFKELEAGSSVDDELSKMK 256
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A7S2H6D6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H6D6_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.500e-77
Identity = 138/223 (61.88%), Postives = 180/223 (80.72%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQ----LTGAADGSLEQQFRLLEGTSAVDQELMRMKQV 657
            MNL DRF RVAKAN+N+IL+  EDPEK++ Q+VEDMQ DLVK+RQSYAE++ATQ+R+ +QKEQAD LA +WY RAQLAL K +E LAREAL RRQQQ +  + L  Q++ QA+++  L+  MQ LEAKI EAK+KK+Q++ARARTA+++QKVNDMLS ++G TSMDAFDRM +KVEALEA AEV+ +    L G+   S+E++F LLEG+SAVD EL +MK++
Sbjct:   54 MNLFDRFSRVAKANVNNILKSLEDPEKIMNQAVEDMQADLVKVRQSYAEITATQRRLLKQKEQADALAQDWYKRAQLALEKDNESLAREALNRRQQQVDIVTDLQAQIDAQADSVDKLYEGMQALEAKIMEAKSKKEQMVARARTAQSTQKVNDMLSGISGNTSMDAFDRMEQKVEALEAAAEVSAEMGNALPGSTQSSIEKEFALLEGSSAVDDELSKMKKM 276
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: A0A7S2UHG5_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHG5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.300e-77
Identity = 139/223 (62.33%), Postives = 178/223 (79.82%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQ------LTGAADGSLEQQFRLLEGTSAVDQELMRMK 651
            MNL DRF RVAK+N+N++L+  EDPEK++ Q++EDMQ DLVK+RQSYAE++ATQ+R+ +QKEQAD LA +WYNRAQLAL  G+E LAREAL+RRQ QTETA  L  Q++ Q  AI  L+  MQQLE++I E+KAKKDQ++ARARTA+++QKVNDML  +TG TSMDAF RM +KVEALEA AEV+ +      L G+A+ S+E+QF  LE +S+VD EL RMK
Sbjct:   52 MNLFDRFSRVAKSNINNVLKNLEDPEKIMNQALEDMQGDLVKVRQSYAEITATQRRLLKQKEQADALAKDWYNRAQLALQSGNEELAREALSRRQAQTETADGLKSQIDQQGAAIDKLYEGMQQLESRILESKAKKDQMVARARTAQSTQKVNDMLGGITGKTSMDAFTRMEDKVEALEAAAEVSAEMGTGKALPGSAESSIEKQFAQLEASSSVDDELKRMK 274
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BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Match: B8BVQ1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVQ1_THAPS)

HSP 1 Score: 241 bits (615), Expect = 4.150e-77
Identity = 136/227 (59.91%), Postives = 180/227 (79.30%), Query Frame = 1 
Query:    1 MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEVSATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTETASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQKVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQ--------LTGAADGSLEQQFRLLEGTSAVDQELMRMKQV 657
            MNL DRF RVAK+N+N++L+  EDPEK++ Q++EDMQ DLVK+RQSYAE++ATQ+R+ +QKEQA+ LA +WY RAQLAL+KG+E LA+EALTRRQQQ ET   L +Q++ QA A+  L+  MQ LEAKI E+K+KK+Q++ARARTA+++QKVNDML  +TG TSMDAF+RM EKVEALEA AEV+ +        L G+   SLE QF++LE  S+VD+EL  MK++
Sbjct:    1 MNLFDRFTRVAKSNINNVLKSLEDPEKIMNQALEDMQTDLVKVRQSYAEITATQRRLMKQKEQAEALAEDWYKRAQLALSKGEEGLAKEALTRRQQQVETMEGLKLQIDMQATAVDKLYEGMQALEAKILESKSKKEQMVARARTAQSTQKVNDMLGGITGMTSMDAFNRMEEKVEALEAAAEVSAEMGALSGNALPGSKASSLESQFKMLEAGSSVDKELEEMKKM 227
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6667.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TN53_9STRA3.330e-9474.65Membrane-associated 30 kDa protein n=2 Tax=Monodop... [more]
A0A6H5KE64_9PHAE2.110e-9171.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1TUY4_9STRA6.290e-8668.35Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A836CIH9_9STRA3.700e-8467.74PspA/IM30 family-domain-containing protein n=1 Tax... [more]
A0A7S2A8X3_TRICV2.890e-8164.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3K4X7_9STRA5.570e-7967.12Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J2SJN9_9STRA1.170e-7765.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2H6D6_9STRA1.500e-7761.88Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2UHG5_9STRA3.300e-7762.33Hypothetical protein n=2 Tax=Attheya septentrional... [more]
B8BVQ1_THAPS4.150e-7759.91Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6667contigP-wetherbeei_contig6667:876..3266 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FR71
PFAMsPspA_IM30
Model size657
Max annot lvl2759|Eukaryota
KEGG koko:K03969
Hectar predicted targeting categoryother localisation
GOsGO:0000229,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0006996,GO:0008150,GO:0009295,GO:0009507,GO:0009508,GO:0009526,GO:0009528,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009657,GO:0009668,GO:0009706,GO:0009941,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0016050,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042646,GO:0042651,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0061024,GO:0071840
Exons6
Evalue2.05e-91
EggNOG OGsCOG1842@1|root,2QSHK@2759|Eukaryota
Ec32 ortholog descriptionProbable membrane-associated 30 kDa protein, chloroplast precursor
Ec32 orthologEc-08_005160.1
Descriptionthylakoid membrane organization
Cds size657
COG categoryKT
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6667.1.1prot_P-wetherbeei_contig6667.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6667 876..3266 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186928.6322603-CDS-P-wetherbeei_contig6667:875..9111683186928.6322603-CDS-P-wetherbeei_contig6667:875..911Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6667 876..911 +
1683186928.645516-CDS-P-wetherbeei_contig6667:1406..15051683186928.645516-CDS-P-wetherbeei_contig6667:1406..1505Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6667 1407..1505 +
1683186928.6554687-CDS-P-wetherbeei_contig6667:1770..18631683186928.6554687-CDS-P-wetherbeei_contig6667:1770..1863Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6667 1771..1863 +
1683186928.66588-CDS-P-wetherbeei_contig6667:2214..23851683186928.66588-CDS-P-wetherbeei_contig6667:2214..2385Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6667 2215..2385 +
1683186928.6763363-CDS-P-wetherbeei_contig6667:2720..28701683186928.6763363-CDS-P-wetherbeei_contig6667:2720..2870Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6667 2721..2870 +
1683186928.6863925-CDS-P-wetherbeei_contig6667:3158..32661683186928.6863925-CDS-P-wetherbeei_contig6667:3158..3266Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6667 3159..3266 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6667.1.1

>prot_P-wetherbeei_contig6667.1.1 ID=prot_P-wetherbeei_contig6667.1.1|Name=mRNA_P-wetherbeei_contig6667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp
MNLGDRFIRVAKANLNSILQKWEDPEKVLEQSVEDMQRDLVKIRQSYAEV
SATQKRMQRQKEQADQLATEWYNRAQLALTKGDEPLAREALTRRQQQTET
ASSLAMQMETQANAIGGLFTAMQQLEAKINEAKAKKDQLIARARTAKTSQ
KVNDMLSSVTGTTSMDAFDRMAEKVEALEAQAEVAGQLTGAADGSLEQQF
RLLEGTSAVDQELMRMKQV
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mRNA from alignment at P-wetherbeei_contig6667:876..3266+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6667.1.1 ID=mRNA_P-wetherbeei_contig6667.1.1|Name=mRNA_P-wetherbeei_contig6667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2391bp|location=Sequence derived from alignment at P-wetherbeei_contig6667:876..3266+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCTGGGAGATCGGTTCATCCGTGTGGCAAAGGTGACTGAGCTCTT
GATTTCTTTTTGCAACCAAAGGGACCAATGCAACGGAGTTTTTCAGTTTC
CTGTTAAGTGCAAGGTGCGGTGTGTCGGGTGCAACTCGTTTTATTGTGTT
CCATGCTGTCAGTTTGTCATTGTTGGATGTTCGTTTCGGTCACGCCGAAG
CAGTGGTCACCTGACGACTTTGTGCGACTCGAGGAAGGAAGACCCGCAGT
GCCGTTGCAAGCGGAATATTCTTCCCTAGAATGGCACGGCATGCCTCTCT
TTGGCCTATGCAATCCTGCTACGGTGTGTCCTTTCGGAGGCCCTGCTTTC
CCCTTCACAATCGGAAGCATCTCATAGCAGCTGGTCCGGGACTGGCACGT
CCGAGTGTCCCCATCCGCGCGCGTTTCCTCCTCCGACAACTTCCATGTTC
CGTCCTTCGTTGTGAAATATCCGTCCAAAAAGCCACTTTATCTACCACGA
AACTTCCGGCTGCCCTTTCTTTTTTTACCAGGCGAACCTGAACAGCATCC
TGCAGAAGTGGGAGGACCCAGAGAAGGTCCTGGAGCAGTCCGTCGAGGAC
ATGCAGCGCGACCTCGTTAAAATCCGCCAGGTCAGTGTTGGACGTTTGTG
CTCCTTCGGTTTCTTGTGATGCTCTGGAGGTTACGAGAGCTCGTATCCGG
CAGAGGCGTTCTTAGGGAATCTCTTTTGGTTTTGGATGGCGAAGTGCTTG
GTCGGTGCAACGCTGGGTCCTGTTCAAGCATTTCAGAATGGTTGCTGTTG
TTTAAATGGGGCATTTCTCGGCTCTATTCCTTCAATCTCTTCTCCTTTAC
CTAAGGCCTCCGTTCCGCTCAACGTTGTCGGTTGCGCCCTCGCAGAGCTA
CGCGGAGGTGTCGGCGACGCAGAAGCGGATGCAGCGGCAAAAGGAGCAGG
CGGATCAGCTCGCCACAGAGTGGTACAACCGGGCACAGGTGGGTTAGCTA
ACATTGGCGGCTGGGGGCAGAGCCGGAGCCATTTTCTACTGTTGAGATAA
CAATGCTCTGCTTGGCACCGTAATGGTAAAAGGGCGGCATAGTATACCCA
GAATGCGGGCACATCCCTTTCGGCGCCGTGCATCTTGAATTCTTGAATGT
CGTGCGAAAGGCTAAGTCGCCAATCGTTCAAACCGTGTCCAAGCACTCCA
AACTCGTCTTACCCAGGTATGTCACTGTCGCCTTGAACCTGCGTGGAAAT
TGTTATCACTCTCTATGAAACGGCTTAGAGCTCTATTCCTAAACCTTATC
TGCCCGCTCCCTTTCTCTCTTCTGCTAACGGCTGCTCAGCTGGCGCTGAC
GAAGGGGGACGAGCCCCTGGCGCGAGAGGCGCTGACGCGGCGGCAACAGC
AGACGGAGACGGCGTCGTCGCTGGCGATGCAGATGGAGACGCAGGCCAAT
GCCATCGGCGGACTCTTCACCGCCATGCAGCAGCTCGAGGCCAAGATCAA
CGAGGCCAAGGTACGTGCTTAGGAGTCTCGTCTCATTCGGGTTCGTCCCA
TAGGATTCGGCGGTTGCAGTCGTTTGGTCGCGGCATTCCTTCTGAAGCTT
ACGATACCTCTTGAGATTTCAGTTTGAGTGTGCTTCTGTCGATAGGCTCC
GTGCATATTGCCTGAGGCTTGCAGTAGCCGTTTCCCTGAAGAAATATAAA
AAGAAAACACGGTTTTACTTGGTCTGCTCACGGCTCTTTCCTTTTCTCTC
TGTCTTTCTGCTGTATGCAACCGATCACCCCGAAATCTCAATCCAAACGA
CCCGCGAAATCTCCGCCGCTCTATCAACCGGGAAAATGCCAACAGGCGAA
AAAGGACCAGCTGATTGCACGAGCGCGGACGGCGAAGACGAGCCAGAAGG
TAAACGACATGCTGAGCTCGGTGACTGGCACCACCTCGATGGACGCATTC
GACCGCATGGCCGAGAAGGTCGAGGCCCTCGAAGCGCAAGCAGAGGTCAG
TGTTGGTGGAGAAGCTTTGTGCGTTCCTACCTTTCTCTGTCGGTTTCTGG
GCTTCCTGTCTCCAGAGCTCTGGAGTGATCTGTTGCACGTTTACGTGCCC
GCTGCTTGAGTTTCTGCGTTGTCCTCCGCCTGCATTGGTTAGTCGACATT
CGCTGGCTTCGCTTTTCGTGCGGGACAGGCTTGTTGTCACGACGTCGCGG
TCCGGTCTTTGTTTTGGGCTGCACGTCTCGGCGCAATGACATTTTCATCC
CACGTTGGTCTCTTTTTCTCGTTTTTGGCGCAGGTGGCGGGGCAGCTGAC
GGGCGCGGCGGACGGGTCGCTGGAGCAGCAGTTCCGCCTCCTCGAGGGGA
CCAGCGCCGTCGACCAGGAGCTCATGCGCATGAAGCAGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6667:876..3266+

>mRNA_P-wetherbeei_contig6667.1.1 ID=mRNA_P-wetherbeei_contig6667.1.1|Name=mRNA_P-wetherbeei_contig6667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig6667:876..3266+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACCTGGGAGATCGGTTCATCCGTGTGGCAAAGGCGAACCTGAACAG
CATCCTGCAGAAGTGGGAGGACCCAGAGAAGGTCCTGGAGCAGTCCGTCG
AGGACATGCAGCGCGACCTCGTTAAAATCCGCCAGAGCTACGCGGAGGTG
TCGGCGACGCAGAAGCGGATGCAGCGGCAAAAGGAGCAGGCGGATCAGCT
CGCCACAGAGTGGTACAACCGGGCACAGCTGGCGCTGACGAAGGGGGACG
AGCCCCTGGCGCGAGAGGCGCTGACGCGGCGGCAACAGCAGACGGAGACG
GCGTCGTCGCTGGCGATGCAGATGGAGACGCAGGCCAATGCCATCGGCGG
ACTCTTCACCGCCATGCAGCAGCTCGAGGCCAAGATCAACGAGGCCAAGG
CGAAAAAGGACCAGCTGATTGCACGAGCGCGGACGGCGAAGACGAGCCAG
AAGGTAAACGACATGCTGAGCTCGGTGACTGGCACCACCTCGATGGACGC
ATTCGACCGCATGGCCGAGAAGGTCGAGGCCCTCGAAGCGCAAGCAGAGG
TGGCGGGGCAGCTGACGGGCGCGGCGGACGGGTCGCTGGAGCAGCAGTTC
CGCCTCCTCGAGGGGACCAGCGCCGTCGACCAGGAGCTCATGCGCATGAA
GCAGGTG
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