mRNA_P-wetherbeei_contig6642.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: D8LI71_ECTSI (ARL2, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI71_ECTSI) HSP 1 Score: 260 bits (664), Expect = 3.740e-83 Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMMS 989
GLDNAGKTTIVKKFNG+DI +I PTLGF+I T+E++GY LNVWDVGGQQTIRSYWRNYFEQTDGL+WVVD+ADR RL C+ EL DLL QEKLAGASLLVFANKQDL GAL EIA+ LGL ++ F RHWSI+ CSAVTG GL +G+DWMV DI +RIFMMS
Sbjct: 23 GLDNAGKTTIVKKFNGDDINAIEPTLGFNIKTMEYKGYQLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSADRGRLQDCKRELHDLLGQEKLAGASLLVFANKQDLVGALGAAEIAQVLGLESKQFANRHWSIVACSAVTGEGLAQGVDWMVSDIGARIFMMS 186
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: H3GA42_PHYRM (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=H3GA42_PHYRM) HSP 1 Score: 259 bits (662), Expect = 7.490e-83 Identity = 123/163 (75.46%), Postives = 142/163 (87.12%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMM 986
GLDNAGKTTI+KKF G+DI ISPTLGFDI TLE++ + LNVWDVGGQQTIRSYWRNYFEQTDGLVWVVD+ADR RL+ C+ EL+ LL QEKLAGA+LL+FANKQDL GAL EIA ALGLR+ F TRHWSI+ CSAVTG GLV+G+DW+VGD++SRIF+M
Sbjct: 23 GLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKDFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELSSLLTQEKLAGATLLIFANKQDLPGALSSAEIADALGLRSAQFSTRHWSIVSCSAVTGDGLVDGIDWLVGDVASRIFLM 185
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: A0A835YQ34_9STRA (ARL2, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ34_9STRA) HSP 1 Score: 258 bits (659), Expect = 2.280e-82 Identity = 127/166 (76.51%), Postives = 144/166 (86.75%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQ--DLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMMS 989
GLDNAGKTTIVKKFNGEDI +ISPTLGF+I+TLEH+G+ LNVWDVGGQQTIRSYWRNYFEQTDG++WVVD+ADRARL CR EL LL QEKLAGASLLVFANKQ DLAGA+ EIA+ L L +E F TRHW+I CSAVTGAGL +G+DW+V DI+SRIFMM+
Sbjct: 23 GLDNAGKTTIVKKFNGEDITTISPTLGFNINTLEHKGFKLNVWDVGGQQTIRSYWRNYFEQTDGIIWVVDSADRARLQDCRRELHALLDQEKLAGASLLVFANKQAIDLAGAVQSAEIAELLDLGSERFSTRHWAIRACSAVTGAGLADGVDWVVDDIASRIFMMA 188
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: W7T532_9STRA (Adp-ribosylation factor-like protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T532_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.780e-81 Identity = 125/172 (72.67%), Postives = 145/172 (84.30%), Query Frame = 3
Query: 477 DLPLSCRGLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGT-RHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMMS 989
++ L GLDNAGKTTI+KKFNGE+I +I PTLGF+I TLE++GY LNVWDVGGQQTIRSYWRNYFE TDGL+WVVD+ADR RL++CR EL LL+QEKLAGASLLVFANKQDL GALPP EIA LGL EAF RHW+I+GCSA+TG GL G+ WMV DI+SRIFM++
Sbjct: 16 EMRLLILGLDNAGKTTILKKFNGEEISTIEPTLGFNIKTLEYQGYLLNVWDVGGQQTIRSYWRNYFEATDGLIWVVDSADRRRLEVCRQELHALLQQEKLAGASLLVFANKQDLQGALPPGEIALTLGLEDEAFAKGRHWTIVGCSAMTGDGLEHGVGWMVRDIASRIFMLN 187
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: K3X431_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X431_GLOUD) HSP 1 Score: 254 bits (649), Expect = 6.900e-81 Identity = 122/163 (74.85%), Postives = 139/163 (85.28%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMM 986
GLDNAGKTTI+KKF G+DI ISPTLGFDI TLE++ + LNVWDVGGQQTIRSYWRNYFEQTDGLVWVVD+ADR RLD C+ EL LL QEKLAGA+LL+FANKQDL GAL EIA L LR+E F RHW+I+ CSAVTGAGL+EG+DW+V DI+SRIF+M
Sbjct: 23 GLDNAGKTTILKKFMGQDITEISPTLGFDIQTLEYKNFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLDDCKRELKQLLTQEKLAGATLLIFANKQDLPGALTASEIADYLELRSEQFVNRHWNIVACSAVTGAGLLEGIDWLVADIASRIFLM 185
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: A0A7S2CN96_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN96_9STRA) HSP 1 Score: 254 bits (650), Expect = 7.810e-81 Identity = 123/165 (74.55%), Postives = 144/165 (87.27%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGT-RHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMMS 989
GLDNAGKTTI+KKFNGEDI +I PTLGF+I TLE++G+ LNVWDVGGQQTIRSYWRNYFEQTDGL+WVVD++DR R++ C+ EL +LL QEKLAGASLL+FANKQDLAGAL +EIA+ L L ++ F + RHWSI CSAVTG GLV+G+DWMV DISSRIFMMS
Sbjct: 36 GLDNAGKTTILKKFNGEDISTIEPTLGFNIKTLEYKGFKLNVWDVGGQQTIRSYWRNYFEQTDGLIWVVDSSDRWRMEDCKRELHNLLDQEKLAGASLLIFANKQDLAGALTAEEIAQVLDLHSDRFASGRHWSIHACSAVTGEGLVDGVDWMVTDISSRIFMMS 200
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: A0A7S3LJR0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJR0_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.380e-80 Identity = 126/170 (74.12%), Postives = 142/170 (83.53%), Query Frame = 3
Query: 477 DLPLSCRGLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMM 986
++ L GLDNAGKTTI+KKFNGEDI +ISPTLGF+I TLEHRGY LN WDVGGQ TIRSYWRNYFE+TDGLV+VVD+AD+ RL+ CR EL LLKQEKLAGASLL+FANKQDL GAL ++IA+ L L +E F TRHW I CSAVTG GLV G+DWMV DISSRIFMM
Sbjct: 16 EMRLLMLGLDNAGKTTILKKFNGEDINTISPTLGFNIKTLEHRGYLLNCWDVGGQTTIRSYWRNYFEETDGLVFVVDSADKRRLEDCRDELHKLLKQEKLAGASLLIFANKQDLVGALTCEQIAQVLELGSEIFTTRHWEIQPCSAVTGEGLVNGIDWMVEDISSRIFMM 185
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: B8BXL9_THAPS (ADP ribosylation factor-like protein 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXL9_THAPS) HSP 1 Score: 251 bits (641), Expect = 8.810e-80 Identity = 120/165 (72.73%), Postives = 142/165 (86.06%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAE-AFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMMS 989
GLDNAGKTTI++KF GE I +I PTLGF+I TLEH+ Y LNVWDVGGQ+TIR+YWRNYFE+TDGL+WVVD+AD+ARL+IC+ EL +LL QEKLAGASLL+ ANKQD+ GAL D+IA LGL+ + +F RHWSI GCSAVTG GLVEGMDWMV DI+SRIFM+S
Sbjct: 15 GLDNAGKTTILRKFCGESIDTIEPTLGFNIKTLEHKNYQLNVWDVGGQKTIRAYWRNYFERTDGLIWVVDSADQARLEICKKELTNLLSQEKLAGASLLILANKQDVRGALCADDIANTLGLKEDVSFENRHWSIRGCSAVTGEGLVEGMDWMVDDIASRIFMLS 179
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: A0A2R5GWI2_9STRA (ADP-ribosylation factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWI2_9STRA) HSP 1 Score: 250 bits (639), Expect = 2.240e-79 Identity = 121/163 (74.23%), Postives = 138/163 (84.66%), Query Frame = 3
Query: 498 GLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMM 986
GLDNAGKTTI+KKFNGEDI +ISPTLGF+I TLEHRGY LNVWDVGGQ TIRSYWRNYFE+TDGL+WVVD ADR RL CR EL LL+QEKLAGAS+LVFANKQDLAGAL ++IA+ L L + F RHW I CSAVTG GLV+G+DW+V DI+SRI++M
Sbjct: 23 GLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGYQLNVWDVGGQTTIRSYWRNYFEETDGLIWVVDCADRERLATCRDELHKLLQQEKLAGASVLVFANKQDLAGALSSEQIAEVLELGSPIFKNRHWQIHPCSAVTGDGLVDGVDWIVDDIASRIYLM 185
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Match: W4H472_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4H472_9STRA) HSP 1 Score: 250 bits (638), Expect = 3.170e-79 Identity = 120/170 (70.59%), Postives = 138/170 (81.18%), Query Frame = 3
Query: 477 DLPLSCRGLDNAGKTTIVKKFNGEDICSISPTLGFDISTLEHRGYSLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDAADRARLDICRSELADLLKQEKLAGASLLVFANKQDLAGALPPDEIAKALGLRAEAFGTRHWSILGCSAVTGAGLVEGMDWMVGDISSRIFMM 986
+L + GLDNAGKTTI+KKF G+DI SISPTLGFDI TLE++ Y LNVWDVGGQQTIRSYWRNYFEQTDGLVWVVD+ADR RL+ C+ EL LL QEKLAGA+LL+FANKQDL GAL P++I ALGL F RHW I CSA TG GL +G+DWMV DIS+RI+M+
Sbjct: 16 ELRILMLGLDNAGKTTILKKFMGQDISSISPTLGFDIQTLEYKQYKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELVALLTQEKLAGATLLIFANKQDLPGALSPEDIVLALGLHESQFANRHWKIHSCSAFTGDGLADGIDWMVSDISNRIYML 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6642.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6642.4.2 >prot_P-wetherbeei_contig6642.4.2 ID=prot_P-wetherbeei_contig6642.4.2|Name=mRNA_P-wetherbeei_contig6642.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp MPFSSPPALSLRTCFTQRRLLDGTPKHLEKGQGEGEGAPTAHSVSCASPFback to top mRNA from alignment at P-wetherbeei_contig6642:1705..3126- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6642.4.2 ID=mRNA_P-wetherbeei_contig6642.4.2|Name=mRNA_P-wetherbeei_contig6642.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1422bp|location=Sequence derived from alignment at P-wetherbeei_contig6642:1705..3126- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6642:1705..3126- >mRNA_P-wetherbeei_contig6642.4.2 ID=mRNA_P-wetherbeei_contig6642.4.2|Name=mRNA_P-wetherbeei_contig6642.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig6642:1705..3126- (Phaeothamnion wetherbeei SAG_119_79)back to top |