mRNA_P-wetherbeei_contig6636.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6636.1.1
Unique NamemRNA_P-wetherbeei_contig6636.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6C0DKH6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKH6_9ZZZZ)

HSP 1 Score: 106 bits (264), Expect = 2.500e-23
Identity = 58/137 (42.34%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  370 GIAKKWIDGKK-----LCNRCVRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHKNRSCEEKRIGELFQDLGNRPLVVIRFNPDKYTREGATHQGVF 765
            GI K  +  KK     LC  C       +PL  N    KE  +F  I      ++   +     V  GCS ++PD+ ++ G+F++I+E DE QHKN  CEEKRI ELFQDLGNRPL+VIRFNPD Y      + G F
Sbjct:   77 GICKSSMVSKKSKYYPLCEPCFCQEYPDSPLSVNYKT-KERYLFDEIKNRFSGVSMRLNK---RVDNGCSGKKPDILIDKGIFSIIIECDENQHKNYECEEKRIMELFQDLGNRPLIVIRFNPDSYITNSVKYDGCF 209          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6C0JXH9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JXH9_9ZZZZ)

HSP 1 Score: 102 bits (254), Expect = 2.880e-21
Identity = 57/111 (51.35%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  406 CNRCVRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHK--NRSCEEKRIGELFQDLGNRPLVVIRFNPDKY 732
            C  C  N     P+ RN    KE+ V  +++E  P +T W  Y D  V  GCSKRRPDL L+LG   +IVEIDE QH   + SCE KR+ EL QDLG+RP+V IRFNPD Y
Sbjct:  286 CVYCYMNLFPDKPISRNYKT-KEKTVVDSVIETFPQMT-W--YSDKKVADGCSKRRPDLLLDLGYQVIIVEIDENQHNAYDCSCENKRLMELSQDLGHRPIVFIRFNPDDY 392          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A7S9XH62_9VIRU (Uncharacterized protein n=1 Tax=Virus NIOZ-UU159 TaxID=2763270 RepID=A0A7S9XH62_9VIRU)

HSP 1 Score: 95.9 bits (237), Expect = 1.520e-20
Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 1
Query:  406 CNRCVRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHKNR--SCEEKRIGELFQDLGNRPLVVIRFNPDKYTRE 741
            C  C  N     P+ RN   ++++VV   I E  P+ T W H  D  V+ GCSKRRPDL L++G + +I+E+DE +H +   SCE KR+ EL QDL +RP+V IRFNPD Y  +
Sbjct:   26 CMYCYMNMFPDKPVSRNYKTKEKKVV-DRIKEKYPDFT-WVH--DKKVEDGCSKRRPDLLLDMGDYIIIIEVDENKHTDYDCSCENKRLMELSQDLQHRPIVFIRFNPDSYINQ 135          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6C0DL73_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DL73_9ZZZZ)

HSP 1 Score: 98.6 bits (244), Expect = 4.220e-20
Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 1
Query:  538 DCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHKNRSCEEKRIGELFQDLGNRPLVVIRFNPDKYTREGATHQGVFSC 771
            D AV GGCSK+RPD+ ++L ++++I+E DE QHKN  CE KR  +LF+DLGNRPL++IRFNPD Y      ++ V  C
Sbjct:  256 DKAVDGGCSKKRPDVLIDLLLYSIIIECDENQHKNYECENKRTMQLFEDLGNRPLILIRFNPDSYGSSEENNRKVDGC 333          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6C0HTW8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HTW8_9ZZZZ)

HSP 1 Score: 97.4 bits (241), Expect = 9.500e-20
Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = 1
Query:  373 IAKKWIDGKKLCNRCVRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHKN--RSCEEKRIGELFQDLGNRPLVVIRFNPDKYTRE 741
            I +   DG   C RC  N     P+ RN    KE+ V   ILE   N T W    D  ++ GCS+RRPDL L+LG   +IVEIDE QH +  ++CE KRI E+ +D+G+RP+V IRFNPD Y +E
Sbjct:  203 ITRNKYDG--YCLRCHINLFPDKPVARNYKT-KEKTVTDFILENFKNFT-W--INDKRIQDGCSRRRPDLLLDLGYQIIIVEIDENQHTDYDKTCENKRIMEISKDVGHRPIVFIRFNPDDYIKE 321          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A835SHI8_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SHI8_CHLIN)

HSP 1 Score: 96.3 bits (238), Expect = 1.330e-19
Identity = 60/138 (43.48%), Postives = 81/138 (58.70%), Query Frame = 1
Query:  370 GIAKKWIDGKKLCNRCVRNHPSYAPLKR---NEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHK--NRSCEEKRIGELFQDLGNRPLVVIRFNPDKYTR-EGATHQGVF 765
            GIAKK+     +C RC   +    P+ R   ++ +R  E +    L L   I+      D AV GGCS+RRPD  L+L   T+I+EIDE QH   + +CE KR+ ELF DLG+RP+VV+RFNPD+YT  +G  H   F
Sbjct:  141 GIAKKYGG---MCFRCYYFNNPDEPVCRAYKSKEMRVVEFLEAADLGLPDGISP---VLDKAVSGGCSRRRPDFLLDLHTHTIILEIDENQHGAYDTTCETKRLMELFCDLGSRPMVVVRFNPDRYTAADGTKHAACF 272          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6G6XPF7_9VIRU (Uncharacterized protein n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XPF7_9VIRU)

HSP 1 Score: 97.4 bits (241), Expect = 1.470e-19
Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 1
Query:  364 DRGIAKKWIDGKKLCNRCVRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHK--NRSCEEKRIGELFQDLGNRPLVVIRFNPDKYTREGATHQGVFSC 771
            ++ ++ K   G   C RC  N      + RN    KE  V   I E  P++T      D  ++ GCS RRPD+ ++LG +TL++EIDE QH+  + +CE KR+ ELF+D G+RP+V+IRFNPD YT     ++ V SC
Sbjct:  248 EKQVSNKEYQG--YCYRCFINIFPDNQIIRNHKT-KERAVADYIREQFPDLTI---ILDKRIQDGCSSRRPDIFIDLGEYTLVIEIDENQHQAYDCTCENKRLMELFRDAGSRPMVMIRFNPDDYTNH--KNEKVISC 377          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6C0EUP7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EUP7_9ZZZZ)

HSP 1 Score: 97.1 bits (240), Expect = 2.320e-19
Identity = 56/135 (41.48%), Postives = 75/135 (55.56%), Query Frame = 1
Query:  373 IAKKWIDGKKLCNRCVRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHKNR--SCEEKRIGELFQDLGNRPLVVIRFNPDKYTREGATHQGVFSC 771
            I +K  DG   C  C  N     P+ RN   ++    +  +  +    +  +   D  + GGCSKRRPDL L+LG   +I+EIDE QH +   SCE KRI EL QDLG+RP+V IRFNPD Y + G   + + SC
Sbjct:  276 IVQKKYDG--YCLYCFINLFPDKPVTRNYKTKE----YAVVEYIKTQFSDLKWIADKIISGGCSKRRPDLLLDLGYQIVIIEIDENQHTDYDCSCENKRIMELSQDLGHRPIVFIRFNPDDYVKNG---ENITSC 401          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A6C0IAT0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IAT0_9ZZZZ)

HSP 1 Score: 94.7 bits (234), Expect = 8.210e-19
Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 1
Query:  373 IAKKWIDGKKLCNRC-VRNHPSYAPLKRNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHKNR--SCEEKRIGELFQDLGNRPLVVIRFNPDKY 732
            IA +  +G   C RC +  HP+  P+ +N    KE  +   I++   N + W    D  +K GCSKRRPDL L+LG   ++VEIDE QH++   SCE KR+ E+ QD+ +RPLV IRFNPD+Y
Sbjct:  194 IANRKYEG--YCLRCCIHLHPNI-PISKNYKT-KERTIVDLIIKKFNNYS-W--ISDKIIKDGCSKRRPDLLLDLGEQVIVVEIDENQHQDYDCSCENKRLMEISQDINHRPLVFIRFNPDEY 309          
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Match: A0A835SG78_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SG78_CHLIN)

HSP 1 Score: 93.2 bits (230), Expect = 9.670e-19
Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  373 IAKKWIDGKKLCNRCVR-NHPSYAPLKRNEMLRKEEVVFGTILEL-LPNITTWEHYGDCAVKGGCSKRRPDLRLELGVFTLIVEIDEEQHK--NRSCEEKRIGELFQDLGNRPLVVIRFNPDKYTR-EGATHQGVF 765
            IAKK+     +C RC   N+P     +  +   K  V    + +L LP+  +     D  V GGCS+RRPD  L++   T+I+E+DE QH+  + +CE KR+ ELF DLG+RP+VV+RFNPDKYT  +G  H   F
Sbjct:  100 IAKKYGG---MCFRCYYFNNPDEPVCRAYKSKEKRVVEVLAVADLGLPDGIS--PVLDKVVGGGCSRRRPDFLLDVHTHTIILEVDENQHRAYDSTCETKRLMELFCDLGSRPIVVVRFNPDKYTAADGTKHAACF 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6636.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6C0DKH6_9ZZZZ2.500e-2342.34Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0JXH9_9ZZZZ2.880e-2151.35Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A7S9XH62_9VIRU1.520e-2045.61Uncharacterized protein n=1 Tax=Virus NIOZ-UU159 T... [more]
A0A6C0DL73_9ZZZZ4.220e-2053.85Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0HTW8_9ZZZZ9.500e-2046.40Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A835SHI8_CHLIN1.330e-1943.48Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A6G6XPF7_9VIRU1.470e-1940.58Uncharacterized protein n=1 Tax=Dishui Lake large ... [more]
A0A6C0EUP7_9ZZZZ2.320e-1941.48Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0IAT0_9ZZZZ8.210e-1944.72Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A835SG78_CHLIN9.670e-1941.91Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6636contigP-wetherbeei_contig6636:1714..2505 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog42099.EPrPV00000024931
Model size792
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.45e-16
EggNOG OGs2CBZ0@1|root,2SU7N@2759|Eukaryota,1MJIN@121069|Pythiales
Cds size792
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186926.7876384-CDS-P-wetherbeei_contig6636:1713..25051683186926.7876384-CDS-P-wetherbeei_contig6636:1713..2505Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6636 1714..2505 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6636.1.1prot_P-wetherbeei_contig6636.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6636 1714..2505 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6636.1.1

>prot_P-wetherbeei_contig6636.1.1 ID=prot_P-wetherbeei_contig6636.1.1|Name=mRNA_P-wetherbeei_contig6636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
CPHNRRRDQCKECKGSGICEHNRRRDRCKECGGTSICKHNRQRYQCKECG
GVSVCEHNRQRQYCKECGGVSVCEHNRQRHYCKECWGTGICEHEIKRSQC
RECQPRTACCQGAACAAYEEKDRGIAKKWIDGKKLCNRCVRNHPSYAPLK
RNEMLRKEEVVFGTILELLPNITTWEHYGDCAVKGGCSKRRPDLRLELGV
FTLIVEIDEEQHKNRSCEEKRIGELFQDLGNRPLVVIRFNPDKYTREGAT
HQGVFSCGTLTTQS
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mRNA from alignment at P-wetherbeei_contig6636:1714..2505+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6636.1.1 ID=mRNA_P-wetherbeei_contig6636.1.1|Name=mRNA_P-wetherbeei_contig6636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig6636:1714..2505+ (Phaeothamnion wetherbeei SAG_119_79)
TGCCCTCACAATAGGCGGCGCGACCAATGTAAGGAATGCAAAGGTTCCGG AATCTGCGAACACAACAGGCGGCGCGACCGCTGCAAGGAATGCGGAGGTA CCAGTATCTGCAAGCACAACAGGCAACGCTACCAATGTAAGGAATGCGGG GGCGTCAGTGTCTGCGAGCACAACAGGCAACGTCAATATTGCAAAGAATG CGGGGGCGTCAGTGTCTGCGAGCACAACAGGCAACGTCATTATTGCAAGG AATGCTGGGGTACCGGCATCTGCGAGCACGAAATCAAGCGCTCGCAATGC AGAGAGTGTCAACCGAGAACCGCATGTTGTCAGGGCGCAGCGTGTGCGGC GTACGAAGAGAAGGACAGAGGTATTGCCAAGAAATGGATCGACGGCAAGA AATTGTGTAACCGGTGCGTCCGGAACCACCCCAGCTACGCTCCGCTCAAG AGAAACGAAATGCTTCGCAAGGAAGAAGTAGTGTTCGGCACGATCCTGGA GCTCCTGCCCAACATCACCACGTGGGAGCACTACGGCGACTGCGCGGTGA AGGGCGGCTGCTCGAAGCGCCGGCCTGACTTGCGTTTGGAGCTCGGCGTC TTCACGTTGATAGTTGAGATCGACGAGGAGCAACACAAGAACCGGAGCTG CGAGGAGAAGCGGATCGGCGAGCTGTTCCAGGATCTGGGCAACAGGCCTC TGGTGGTCATCAGGTTCAACCCCGACAAGTACACGCGAGAAGGAGCGACT CATCAGGGCGTATTCTCATGCGGTACTCTGACAACTCAGTCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6636:1714..2505+

>mRNA_P-wetherbeei_contig6636.1.1 ID=mRNA_P-wetherbeei_contig6636.1.1|Name=mRNA_P-wetherbeei_contig6636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig6636:1714..2505+ (Phaeothamnion wetherbeei SAG_119_79)
TGCCCTCACAATAGGCGGCGCGACCAATGTAAGGAATGCAAAGGTTCCGG
AATCTGCGAACACAACAGGCGGCGCGACCGCTGCAAGGAATGCGGAGGTA
CCAGTATCTGCAAGCACAACAGGCAACGCTACCAATGTAAGGAATGCGGG
GGCGTCAGTGTCTGCGAGCACAACAGGCAACGTCAATATTGCAAAGAATG
CGGGGGCGTCAGTGTCTGCGAGCACAACAGGCAACGTCATTATTGCAAGG
AATGCTGGGGTACCGGCATCTGCGAGCACGAAATCAAGCGCTCGCAATGC
AGAGAGTGTCAACCGAGAACCGCATGTTGTCAGGGCGCAGCGTGTGCGGC
GTACGAAGAGAAGGACAGAGGTATTGCCAAGAAATGGATCGACGGCAAGA
AATTGTGTAACCGGTGCGTCCGGAACCACCCCAGCTACGCTCCGCTCAAG
AGAAACGAAATGCTTCGCAAGGAAGAAGTAGTGTTCGGCACGATCCTGGA
GCTCCTGCCCAACATCACCACGTGGGAGCACTACGGCGACTGCGCGGTGA
AGGGCGGCTGCTCGAAGCGCCGGCCTGACTTGCGTTTGGAGCTCGGCGTC
TTCACGTTGATAGTTGAGATCGACGAGGAGCAACACAAGAACCGGAGCTG
CGAGGAGAAGCGGATCGGCGAGCTGTTCCAGGATCTGGGCAACAGGCCTC
TGGTGGTCATCAGGTTCAACCCCGACAAGTACACGCGAGAAGGAGCGACT
CATCAGGGCGTATTCTCATGCGGTACTCTGACAACTCAGTCC
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