mRNA_P-wetherbeei_contig6610.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: D8LC84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC84_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.790e-11 Identity = 58/86 (67.44%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 1387 SASSGKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
S S GK E V DGRR+I F NGT K XXXXXXXXXXXXXXX VV+Y YAAA TTHT +P+GLEVFEFP+GQVERHH
Sbjct: 1539 SGSGGKVEHVLRDGRRVILFANGTQKETXXXXXXXXXXXXXXXKRVGGETG-VVIYTYAAARTTHTMHPSGLEVFEFPNGQVERHH 1623
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: K7F556_PELSI (Uncharacterized protein n=2 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7F556_PELSI) HSP 1 Score: 71.2 bits (173), Expect = 1.250e-10 Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1402 KEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
K E V DGRRII+FRNGT K XXXXXXXXXXXXXXX V+ Y YA A+TTHTTYP GLEV +FP+ Q+E+HH
Sbjct: 1 KVEEVLTDGRRIITFRNGTKKEISADKRMTVXXXXXXXXXXXXXXXRVIYY-YADAQTTHTTYPNGLEVLQFPNNQIEKHH 80
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A6H5KA73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA73_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.610e-10 Identity = 57/82 (69.51%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 1399 GKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
GK E V DGRRII F NGT K XXXXXXXXXXXXXXXX +V+Y YAAA TTHT +P+GLEVFEFP+GQVERHH
Sbjct: 1570 GKVEHVLRDGRRIILFANGTQKETXXXXXXXXXXXXXXXXRVEGETG-IVIYTYAAARTTHTMHPSGLEVFEFPNGQVERHH 1650
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A151M2G1_ALLMI (Centromere protein J-like n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151M2G1_ALLMI) HSP 1 Score: 74.3 bits (181), Expect = 2.050e-10 Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1399 GKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
GK E V DGRR+I+FRNGT K XXXXXXXXXX V+ Y YA A+TTHTTYPTGLEV +FP+ Q+E+HH
Sbjct: 223 GKVEEVLTDGRRVITFRNGTKKEISADKRMTVVSFXXXXXXXXXXDQRVI-YFYADAQTTHTTYPTGLEVLQFPNNQIEKHH 303
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A452GXE5_9SAUR (Uncharacterized protein n=4 Tax=Testudinidae TaxID=8487 RepID=A0A452GXE5_9SAUR) HSP 1 Score: 75.1 bits (183), Expect = 3.480e-10 Identity = 54/84 (64.29%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 1393 SSGKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
+ GK E V DGRRII+FRNGT K XXXXXXXXXXXXXXX V+ Y YA AETTHTTYP GLEV +FP+ Q+E+HH
Sbjct: 1225 ADGKVEEVLTDGRRIITFRNGTKKEISADKRMTVXXXXXXXXXXXXXXXRVIYY-YADAETTHTTYPNGLEVLQFPNNQIEKHH 1307
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A151M2G5_ALLMI (Uncharacterized protein n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151M2G5_ALLMI) HSP 1 Score: 74.3 bits (181), Expect = 5.220e-10 Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1399 GKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
GK E V DGRR+I+FRNGT K XXXXXXXXXX V+ Y YA A+TTHTTYPTGLEV +FP+ Q+E+HH
Sbjct: 764 GKVEEVLTDGRRVITFRNGTKKEISADKRMTVVSFXXXXXXXXXXDQRVI-YFYADAQTTHTTYPTGLEVLQFPNNQIEKHH 844
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: UPI0009072E2C (centromere protein J n=2 Tax=Crocodylia TaxID=1294634 RepID=UPI0009072E2C) HSP 1 Score: 74.3 bits (181), Expect = 5.420e-10 Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1399 GKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
GK E V DGRR+I+FRNGT K XXXXXXXXXX V+ Y YA A+TTHTTYPTGLEV +FP+ Q+E+HH
Sbjct: 850 GKVEEVLTDGRRVITFRNGTKKEISADKRMTVVSFXXXXXXXXXXDQRVI-YFYADAQTTHTTYPTGLEVLQFPNNQIEKHH 930
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A3Q0FR35_ALLSI (T-complex protein 10A homolog isoform X1 n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A3Q0FR35_ALLSI) HSP 1 Score: 74.3 bits (181), Expect = 6.030e-10 Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1399 GKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
GK E V DGRR+I+FRNGT K XXXXXXXXXX V+ Y YA A+TTHTTYPTGLEV +FP+ Q+E+HH
Sbjct: 1241 GKVEEVLTDGRRVITFRNGTKKEISADKRMTVVSFXXXXXXXXXXDQRVI-YFYADAQTTHTTYPTGLEVLQFPNNQIEKHH 1321
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A8C3HF20_CHRPI (Uncharacterized protein n=15 Tax=Testudinoidea TaxID=8486 RepID=A0A8C3HF20_CHRPI) HSP 1 Score: 73.9 bits (180), Expect = 7.750e-10 Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1393 SSGKEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
+ GK E V DGRRII+FRNGT K XXXXXXXXXXXXXX V+ Y YA A+TTHTTYP GLEV +FP+ Q+E+HH
Sbjct: 1130 ADGKVEEVLTDGRRIITFRNGTKKEISADKRMTVVXXXXXXXXXXXXXXRVIYY-YADAQTTHTTYPNGLEVLQFPNNQIEKHH 1212
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Match: A0A8C4WDP6_9SAUR (Uncharacterized protein n=2 Tax=Testudinidae TaxID=8487 RepID=A0A8C4WDP6_9SAUR) HSP 1 Score: 72.4 bits (176), Expect = 8.460e-10 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1402 KEERVFPDGRRIISFRNGTVKXXXXXXXXXXXXXXXXXXXXXXXXXXVVVYRYAAAETTHTTYPTGLEVFEFPSGQVERHH 1644
K E V DGRRII+FRNGT K XXXXXXXXXXXXXXX V+ Y YA AETTHTTYP GLEV +FP+ Q+E+HH
Sbjct: 222 KVEEVLTDGRRIITFRNGTKKEVSADKRMTVXXXXXXXXXXXXXXXRVIYY-YADAETTHTTYPNGLEVLQFPNNQIEKHH 301 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6610.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6610.3.1 >prot_P-wetherbeei_contig6610.3.1 ID=prot_P-wetherbeei_contig6610.3.1|Name=mRNA_P-wetherbeei_contig6610.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=670bp VTGAAGGRASVGGGSIGGGGSVNGGGSVNGGGSIHGGDSVHGSTGGRVRPback to top mRNA from alignment at P-wetherbeei_contig6610:1362..3372+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6610.3.1 ID=mRNA_P-wetherbeei_contig6610.3.1|Name=mRNA_P-wetherbeei_contig6610.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2011bp|location=Sequence derived from alignment at P-wetherbeei_contig6610:1362..3372+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6610:1362..3372+ >mRNA_P-wetherbeei_contig6610.3.1 ID=mRNA_P-wetherbeei_contig6610.3.1|Name=mRNA_P-wetherbeei_contig6610.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2010bp|location=Sequence derived from alignment at P-wetherbeei_contig6610:1362..3372+ (Phaeothamnion wetherbeei SAG_119_79)back to top |