mRNA_P-wetherbeei_contig6602.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A3C0TYG0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYG0_9PROT) HSP 1 Score: 240 bits (612), Expect = 2.470e-78 Identity = 115/172 (66.86%), Postives = 135/172 (78.49%), Query Frame = 1
Query: 1 VFTAQATITSVLFGSNPVVQFASADGGAMVTEVGMVWAPGISTSSAIASSGSEGLLNPIAAATYKLNADLKGPTNYATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDAPLDDRDFASINIAYAF 516
VFTAQ T TS+LF SNP+VQFASAD GA+VTEVGMV PGISTSS IA ++GL N +AA T LN DL+ + YAT FSWGAQG+ ++TYNR FGSP+NL P IAW+WDLGG TP P GNY AERKAI L + Y + W GS++WT+NFGPDAPLDDRDFAS+ I+YAF
Sbjct: 19 VFTAQTTFTSLLFASNPMVQFASADSGALVTEVGMVLVPGISTSSGIAGGNTKGLANSLAAQTAALNPDLELASGYATKFSWGAQGLMSLTYNRAFGSPINLTPSIAWKWDLGGNTPLPFGNYQAERKAITLGVTGTYLASWAGSINWTSNFGPDAPLDDRDFASVTISYAF 190
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A3D3UJ75_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UJ75_9PROT) HSP 1 Score: 198 bits (503), Expect = 2.010e-62 Identity = 90/143 (62.94%), Postives = 111/143 (77.62%), Query Frame = 1
Query: 88 VTEVGMVWAPGISTSSAIASSGSEGLLNPIAAATYKLNADLKGPTNYATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDAPLDDRDFASINIAYAF 516
+TE+GMV+ P IS A+++SGS GLLN +AA TYKL+A+L+ T+YAT FSWGAQG +TYNR FG+P+NL P WRWD GRTPSP NY +RK+I L + A+Y + W GS+SWT NFGPDAPLDDRDFASINI+YAF
Sbjct: 1 MTEIGMVYLPSISAEDALSASGSSGLLNGLAAGTYKLSAELESATHYATKFSWGAQGRIGLTYNRAFGTPINLSPVFNWRWDFNGRTPSPFSNYQEDRKSISLGVNASYLASWAGSISWTHNFGPDAPLDDRDFASINISYAF 143
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A351T7Q8_9PROT (Uncharacterized protein (Fragment) n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T7Q8_9PROT) HSP 1 Score: 206 bits (525), Expect = 2.310e-60 Identity = 96/171 (56.14%), Postives = 124/171 (72.51%), Query Frame = 1
Query: 4 FTAQATITSVLFGSNPVVQFASADGGAMVTEVGMVWAPGISTSSAIASSGSEGLLNPIAAATYKLNADLKGPTNYATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDAPLDDRDFASINIAYAF 516
FTAQ T T +LF SNP+V AD G ++TE GMV+ PGIS++ +++SG+ GL N +A+ Y +N LK N T FSWGAQG +TYNR+FG+P N+ P++ WRWD+ GRTP+P GN+ +RK+I L A Y S WTGSVSWT NFGPDAPL DRDFAS+N++YAF
Sbjct: 452 FTAQTTFTQLLFASNPMVTALGADQGTLITEFGMVYVPGISSADGLSASGTSGLANTLASQYYHVNKSLKFAENLPTRFSWGAQGRVQLTYNRLFGTPFNVSPRVNWRWDINGRTPAPYGNFQEDRKSISLGANATYLSSWTGSVSWTHNFGPDAPLSDRDFASLNVSYAF 622
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A3C0TXT2_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXT2_9PROT) HSP 1 Score: 119 bits (299), Expect = 3.280e-28 Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 1
Query: 1 VFTAQATITSVLFGSNPVVQFASADGGAMVTEVGMVWAPGISTSSAIASSGSEGLLNPIAAATYKLNADLKGPTNYAT 234
VFTAQ T T LFGSNPVVQFASADGG +VTEVGMV+ PG+ST+SAIASS SEGL NPIAAATYKLN++LKGPTNYAT
Sbjct: 571 VFTAQGTSTMALFGSNPVVQFASADGGTVVTEVGMVFVPGLSTASAIASSNSEGLFNPIAAATYKLNSELKGPTNYAT 648
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: X5M8H6_9HYPH (Uncharacterized protein n=2 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5M8H6_9HYPH) HSP 1 Score: 99.0 bits (245), Expect = 6.860e-21 Identity = 68/185 (36.76%), Postives = 100/185 (54.05%), Query Frame = 1
Query: 1 VFTAQATITSVLFGSNPVVQFASADGGAMVTEVGMVWAPGISTSS-AIASSGSEGLLNPIAAATYK---------LNADLKGPTNYATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDA---PLDDRDFASINIAYAF 516
VFT Q T+ SNP++ F AD G +VTE G+V PG+ S A ++G+ N ++A LN D + T S+G + + YN FG+P L PQ+ +R DL G TP+PLGN++ +R++IGLS+ AN Q+ W +S+T G + LDD DF S+ +Y+F
Sbjct: 679 VFTFQIGTTATYTNSNPLINFLGADIGILVTEFGVVHVPGVPDESPATQAAGTVVEFNRLSAVCRSGTDLPLGGILNLDSRQGCR-PTETSYGGILLTRLDYNNAFGTPWTLSPQLVYRHDLEGFTPAPLGNFVEDRRSIGLSVTANLQNTWRVGLSYTDFMGSETYQNNLDD-DFVSLTASYSF 861
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A081B8Y3_9HYPH (Conserved protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081B8Y3_9HYPH) HSP 1 Score: 95.9 bits (237), Expect = 7.640e-20 Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 1
Query: 58 QFASADGGAMVTEVGMVWAPGISTSSAIASSGSEGLLNPIAAATYKLNADLKGPTNYATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLG-NYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDA--PLDDRDFASINIAYAF 516
QF +D +T VG ++ P S G+ NP AA + A+ Y T FS G + + YN FG PV L P +AWR D+ G +P P+G +++ KA+ L L A+YQS W S+ +T +FG L+DRDF S +I+YAF
Sbjct: 485 QFIGSDNATFLTNVGFMYVPDAEDHPLNRSGSLRGIENPFGAALF---ANGVTEVQYGTAFSAGYRLVVAADYNNAFGLPVTLSPNVAWRHDVTGYSPGPIGPGFVSGLKAVTLGLNASYQSAWRASLGYTNSFGGGFRNALNDRDFVSASISYAF 637
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A6L7MD14_9PROT (DUF1302 domain-containing protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L7MD14_9PROT) HSP 1 Score: 89.4 bits (220), Expect = 1.440e-17 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1
Query: 226 YATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDAP--LDDRDFASINIAYAF 516
+A FSWG + + MTYN G PV+L PQIA+ D+ G P+P+GN++ +RK + LS+ A Y W +S+T +FG A L+DRDF + + Y+F
Sbjct: 520 FADSFSWGYRALLRMTYNNAVG-PVSLSPQIAFSHDVNGTAPTPIGNFIEDRKTVTLSINAGYLHSWRAGLSYTNSFGGGAANLLNDRDFLAFTMNYSF 617
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A353LLP1_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LLP1_9PROT) HSP 1 Score: 85.9 bits (211), Expect = 1.590e-16 Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 1 VFTAQATITSVLFGSNPVVQFASADGGAMVTEVGMVWAPGISTSSAIASSGSEGLLNPIAAATYKLNADLKGPTNYAT 234
VFTAQ T+TS+LF SNP V AD G ++TE+GMV+ P IS A+++SGS GLLN +AA TYKL+A+L+ T+YAT
Sbjct: 333 VFTAQTTLTSILFASNPFVTAMGADQGVLITEIGMVYLPSISAEDALSASGSSGLLNGLAAGTYKLSAELESATHYAT 410
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: UPI0012484F8F (DUF1302 domain-containing protein n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI0012484F8F) HSP 1 Score: 85.5 bits (210), Expect = 3.180e-16 Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 226 YATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFGPDAP---LDDRDFASINIAYAF 516
Y T FSWG + Y F VNL PQ+AW D+ G P P GN++ +RK+IG+SL A YQ++ TG++++T NF P L DRDF S +++Y+F
Sbjct: 538 YTTSFSWGYRSRLVWDYPNAFAG-VNLSPQLAWSHDVRGFAPQPAGNFIEDRKSIGVSLEAVYQNKITGNIAYT-NFMDGEPFNELTDRDFVSASVSYSF 635
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Match: A0A3N2R390_9GAMM (DUF1302 domain-containing protein n=2 Tax=Marinobacter TaxID=2742 RepID=A0A3N2R390_9GAMM) HSP 1 Score: 85.1 bits (209), Expect = 4.310e-16 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 184 ATYKLNADLKGPTNYATPFSWGAQGIFNMTYNRVFGSPVNLVPQIAWRWDLGGRTPSPLGNYMAERKAIGLSLAANYQSRWTGSVSWTANFG--PDAPLDDRDFASINIAYAF 516
A +N + + T FSWG + F Y VF VNL PQ+A+ D+ G PSP GN++ RKAIGLSL YQ+R++ +V +T FG P L DRDF S +++ +F
Sbjct: 510 AALNINTNYCNNEGFTTSFSWGYRTRFVWDYPNVFAG-VNLSPQLAFSHDVQGYAPSPGGNFLEGRKAIGLSLTGVYQNRYSANVGYTNYFGGKPYNELTDRDFVSASVSVSF 621 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6602.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6602.3.1 >prot_P-wetherbeei_contig6602.3.1 ID=prot_P-wetherbeei_contig6602.3.1|Name=mRNA_P-wetherbeei_contig6602.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp VFTAQATITSVLFGSNPVVQFASADGGAMVTEVGMVWAPGISTSSAIASSback to top mRNA from alignment at P-wetherbeei_contig6602:2634..3152- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6602.3.1 ID=mRNA_P-wetherbeei_contig6602.3.1|Name=mRNA_P-wetherbeei_contig6602.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig6602:2634..3152- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6602:2634..3152- >mRNA_P-wetherbeei_contig6602.3.1 ID=mRNA_P-wetherbeei_contig6602.3.1|Name=mRNA_P-wetherbeei_contig6602.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig6602:2634..3152- (Phaeothamnion wetherbeei SAG_119_79)back to top |