mRNA_P-wetherbeei_contig6601.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: D8LN40_ECTSI (60S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN40_ECTSI) HSP 1 Score: 316 bits (809), Expect = 1.630e-106 Identity = 163/220 (74.09%), Postives = 189/220 (85.91%), Query Frame = 1
Query: 1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
QPK DLSRFVKWPRYIR+QRQRKIL QRLKVPPSINQF+ +DKNQATEL K++ KYQPE K AK RLK++AAAK AG+ AP K V+KFGLKHVTTL+E++KA++V IA DV PIELVVWLPALCRKM +PYCI+K KARLGT+VHQKNAAV+C T V+KED++KL +L+ NF QFN+GFVR+WGGG MGLKTQRKLEKRQK IEAELAKKAQ+
Sbjct: 38 QPKV-DLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSKAIDKNQATELLKVLMKYQPEDKKAKQQRLKEIAAAKEAGKEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A6V1R9A7_HETAK (60S ribosomal protein L7a n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9A7_HETAK) HSP 1 Score: 295 bits (755), Expect = 2.560e-98 Identity = 158/218 (72.48%), Postives = 182/218 (83.49%), Query Frame = 1
Query: 1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAA-GETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKK 651
+PK RDLSR+VKWPR +RIQRQRKIL QRLKVPP+I QF+ L+KNQATELFKL+ KYQPETK AK RLK++AAA A GE KP P +K+GLKHVTTL+EQK+A +VCIA DV P+ELVVWLPALCRKM VP+C+VK+KARLGT+ H+KNAAVV TEV+KEDKAKLD+L NF QFN VR+WGGG MGLKTQRKLEKRQK +EAELAKK
Sbjct: 38 RPKKRDLSRYVKWPRNVRIQRQRKILLQRLKVPPAIQQFSQPLEKNQATELFKLLVKYQPETKKAKQQRLKEMAAAGATKGE-----KPGPTLKYGLKHVTTLIEQKEAKLVCIAHDVNPLELVVWLPALCRKMGVPFCVVKDKARLGTLCHKKNAAVVALTEVNKEDKAKLDTLGANFTAQFNDTPVRKWGGGIMGLKTQRKLEKRQKALEAELAKK 250
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: F0Y2N8_AURAN (60S ribosomal protein L7a (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2N8_AURAN) HSP 1 Score: 295 bits (754), Expect = 3.510e-98 Identity = 157/215 (73.02%), Postives = 176/215 (81.86%), Query Frame = 1
Query: 13 RDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKK 651
RDLSRFVKWPRY+R+QRQ+KIL QRLKVPP++NQFATTLDKNQA ELFKL+ KYQPE KAAKADR+K LA AKAAG A K VVKFGLKHVT LVE KKA +VCIASDV PIELVVWLPALC+KM+VPYCIVKNK+RLGT+VHQK AAV C T V KED+ LD LR NF+ +N R+WGGG MGLKTQ KL KR+K ++AELAKK
Sbjct: 40 RDLSRFVKWPRYVRLQRQKKILQQRLKVPPALNQFATTLDKNQAAELFKLLMKYQPEDKAAKADRVKALAEAKAAGGAAPEGKAPTVVKFGLKHVTYLVENKKAKLVCIASDVDPIELVVWLPALCKKMDVPYCIVKNKSRLGTVVHQKTAAVCCLTTVKKEDQHSLDQLRSNFKAMYNDNVAHARKWGGGIMGLKTQAKLAKREKALQAELAKK 254
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: W7TKH1_9STRA (60S ribosomal protein L7a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH1_9STRA) HSP 1 Score: 281 bits (719), Expect = 7.560e-93 Identity = 152/221 (68.78%), Postives = 176/221 (79.64%), Query Frame = 1
Query: 1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAG-ETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
+PKGRDLSRFVKWPRY+RIQRQRKIL QRLKVPP+INQF+ LDKNQATELFKL+AKY+PE+K K +RLKQLAAAKA+G ET AP K T V+K+GLKHVT L+E KK V IA DV PIELVVW+PALCRK +PY IVK KARLG +VH+KNAAVV E KEDKA + + F+ +FN R WGGG MGLKTQ++LE RQ+ +EAELAKKA F
Sbjct: 36 RPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQT-VIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A7S0LF41_9EUKA (60S ribosomal protein L7a n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LF41_9EUKA) HSP 1 Score: 280 bits (716), Expect = 2.470e-92 Identity = 147/217 (67.74%), Postives = 174/217 (80.18%), Query Frame = 1
Query: 7 KGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQ 657
KGRDLSR+V+WPRY+RIQRQ+K+L QRLKVPPSINQF TLDKNQA+ELFKL+ KYQPETKAAKA RL+ LA A AA E P +K+GLKHVTTL+EQKKA +V I+ DV PIELV+WLPALCRKM VP+CIVK K+RLGT+ H+K +VV T V+ ED++KL +L EN R QFN+ R+WGGG MGLKTQ KL KR + IEAELAKKA+
Sbjct: 40 KGRDLSRYVRWPRYVRIQRQKKVLLQRLKVPPSINQFRRTLDKNQASELFKLLVKYQPETKAAKATRLETLAKATAAKENTTSGPPPATLKYGLKHVTTLIEQKKAKLVIISHDVDPIELVLWLPALCRKMNVPFCIVKGKSRLGTLTHKKTCSVVALTAVNNEDESKLKTLAENCRVQFNENVERKWGGGIMGLKTQAKLTKRAQAIEAELAKKAE 256
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A7S3HBR5_9STRA (60S ribosomal protein L7a n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBR5_9STRA) HSP 1 Score: 279 bits (714), Expect = 4.800e-92 Identity = 146/217 (67.28%), Postives = 173/217 (79.72%), Query Frame = 1
Query: 7 KGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQ 657
KG+DLSR+V+WPRY+RIQRQ+KIL QRLKVPPSINQF TLDKNQA+ELFKL+ KYQPETKAAK RL+ LA A AA E+ P +KFGLKHVTTL+EQKKA +V I DV PIELV+WLPALCRKM VP+ IVK K+RLGT+ H+K +VVC T V+KED++KL +L ENF+ QFN R+WGGG MGLKTQ KL+KR K +E E AKKA+
Sbjct: 39 KGKDLSRYVRWPRYVRIQRQKKILLQRLKVPPSINQFQRTLDKNQASELFKLLVKYQPETKAAKTTRLEALAQATAAKESTPSGPPPATLKFGLKHVTTLIEQKKAKLVVIPHDVDPIELVLWLPALCRKMNVPFAIVKGKSRLGTLTHKKTCSVVCLTSVNKEDESKLKTLGENFKAQFNDNVERKWGGGIMGLKTQAKLDKRAKALEVEEAKKAE 255
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A7S2WM83_9STRA (60S ribosomal protein L7a n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WM83_9STRA) HSP 1 Score: 275 bits (702), Expect = 4.030e-90 Identity = 145/218 (66.51%), Postives = 176/218 (80.73%), Query Frame = 1
Query: 4 PKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFN--KGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKK 651
PKGRDL R+V+WPRY+RIQRQRKIL QRLKVPPSINQF+ LDK+QATELF L+AKY+PE+KA K +RLK+LA AK AG + KP VVK+GL HVTTL+E+KKA +V IASDVVP+ELVVW+PALCRKM++PYCIV NK RLG +VH+K AAV+ TEV+KE ++KL L R QFN K +R+WGGG MGL+TQ KLE+R+ +EAE AKK
Sbjct: 43 PKGRDLGRYVRWPRYVRIQRQRKILLQRLKVPPSINQFSNKLDKSQATELFGLLAKYRPESKAEKKERLKKLAEAKVAGGSGDSGKPPAVVKYGLHHVTTLIEEKKAKLVIIASDVVPLELVVWIPALCRKMDIPYCIVNNKGRLGAVVHKKRAAVLAITEVNKEHESKLAQLANVCRAQFNDNKDALRKWGGGVMGLRTQAKLERRRAALEAEEAKK 260
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A0P1B814_PLAHL (60S ribosomal protein L7a n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B814_PLAHL) HSP 1 Score: 274 bits (701), Expect = 5.530e-90 Identity = 153/222 (68.92%), Postives = 178/222 (80.18%), Query Frame = 1
Query: 1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
QPK RDLSRFV+WPRY+R+QRQRKIL QRLKVPPSINQF+ T+DKN AT+LFKL+ KYQPETKAAK RL+ +AA K E APP VVKFGL HVT+L+E KKA +V IA DV PIELVV+LPALCR+ ++PYCIVK KARLG +VHQKNAAVV T V+KEDKAK DSL + FR +FN+ R+WGGG MGLKTQ+KLE R+K I AE AKKAQ+
Sbjct: 49 QPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKQ--EATAPPA---VVKFGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSQVFRAKFNEDSATRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 264
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A3R7JAR0_9STRA (60S ribosomal protein L7a n=8 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JAR0_9STRA) HSP 1 Score: 274 bits (700), Expect = 8.100e-90 Identity = 152/222 (68.47%), Postives = 178/222 (80.18%), Query Frame = 1
Query: 1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
QPK RDLSRFV+WPRY+R+QRQRKIL QRLKVPPS+NQF+ TLDKN AT+LFKL+ KYQPETKAAK RL+ +AA K E +APP VVKFGL HVT+LVE KKA +V IA DV PIELVV+LPALCR+ ++PYCIVK K+RLG +VHQKNAAVV T V+KEDKAK DSL E F +FN+ R+WGGG MGLKTQ+KLE R+K + AE AKKAQ+
Sbjct: 50 QPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSVNQFSNTLDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKE--EASAPPA---VVKFGLNHVTSLVENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKSRLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFHAKFNEDSTIRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 265
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: T0QDT5_SAPDV (60S ribosomal protein L7a n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0QDT5_SAPDV) HSP 1 Score: 273 bits (697), Expect = 2.390e-89 Identity = 149/222 (67.12%), Postives = 176/222 (79.28%), Query Frame = 1
Query: 1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
QPK RDLSRFV+WP+ +R+QRQ KIL RLKVPPSINQF TLDKN AT+L+KL+ KYQPE+KAAK RL+ +AA K + +APP V+K+GL HVT+L+E KKA MVCIA DV PIELVV+LPALCRKM++PYCIVK KARLG +VH+KNAAVV T+V+KEDKAK DSL FR QFN R+WGGG MGLKTQ+KLE R K + AELAKKAQ+
Sbjct: 51 QPK-RDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFTNTLDKNAATDLYKLLLKYQPESKAAKTQRLRDIAAGKE--QVSAPPA---VIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDESTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6601.1.1 >prot_P-wetherbeei_contig6601.1.1 ID=prot_P-wetherbeei_contig6601.1.1|Name=mRNA_P-wetherbeei_contig6601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATEback to top mRNA from alignment at P-wetherbeei_contig6601:1273..3373- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6601.1.1 ID=mRNA_P-wetherbeei_contig6601.1.1|Name=mRNA_P-wetherbeei_contig6601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2101bp|location=Sequence derived from alignment at P-wetherbeei_contig6601:1273..3373- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6601:1273..3373- >mRNA_P-wetherbeei_contig6601.1.1 ID=mRNA_P-wetherbeei_contig6601.1.1|Name=mRNA_P-wetherbeei_contig6601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig6601:1273..3373- (Phaeothamnion wetherbeei SAG_119_79)back to top |