mRNA_P-wetherbeei_contig6598.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.640e-110 Identity = 192/284 (67.61%), Postives = 233/284 (82.04%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
LP LPAEG + GVLPRVI++LV RR VKK+L D ++++LDIRQKALKLTANSMYGCLGF SRF AKPIAALVT +GRE+LQRTVD+++ QLGL+VIYGDTDS+MINT+STDL VK +G V+REVNKLY+SLEL+LDGVFKSMLLLKKKKYAAL+ E+KGLDLVRR+WC LSKD G+F + R+LSGE RETVV IHDH+ ALAA++RAG V + ++VIT+GLN+APHEY +A ++PHVQVALAMMKAGK V++G+HIPYV+C
Sbjct: 1030 LPDLPAEGMDIGVLPRVIRTLVERRSVVKKMLKKE--KDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQVKDIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGSITYDKEMKGLDLVRREWCTLSKDTGKFVLDRVLSGEARETVVTGIHDHLEALAASMRAGEVEVPRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC 1311
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH) HSP 1 Score: 356 bits (913), Expect = 3.320e-107 Identity = 185/284 (65.14%), Postives = 221/284 (77.82%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
LPPLP GVLPRVIK+LV RRR+VK LL D V+R+ LDIRQKALKLTANSMYGCLGF SRF A+PIAALVT GRE LQRTVD+A Q+GLDVIYGDTDS+MINTN DL VK +G V+REVNKLY+SLEL+LDG+F+SMLLLKKKKYAAL ELKGLDLVRRDWCP+SKD G++ V +ILSG PRE +V AIHD+++ LAA +R +P+EQ+VIT+GLN+ P +Y ++ +PH+QVAL M+KA KPV+IG+HIPYVIC
Sbjct: 821 LPPLPESSSTPGVLPRVIKTLVDRRRQVKNLLKNER--DPVQRQLLDIRQKALKLTANSMYGCLGFSFSRFYARPIAALVTAMGREALQRTVDLATHQMGLDVIYGDTDSVMINTNLVDLQQVKEIGNKVKREVNKLYKSLELDLDGIFRSMLLLKKKKYAALTIHELGNGQVEYEKELKGLDLVRRDWCPMSKDAGKYVVDQILSGRPREDIVMAIHDYLSDLAAKIRNHEIPMEQYVITKGLNKNPKDYPDSGGQPHLQVALQMLKANKPVNIGDHIPYVIC 1102
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S2FD72_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FD72_9STRA) HSP 1 Score: 316 bits (809), Expect = 1.850e-99 Identity = 165/285 (57.89%), Postives = 214/285 (75.09%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
LPP P ++GV+P+VI++++ RR +VK+LL +D K++QLDIRQKALKLTANS+YGCLGF SRF A+PIAALVT KGR+ LQRTVD+A+ +GL+VIYGDTDSIMI+T TDL V +G+ V E NKLYR+LELE+DGVFK+MLLLKKKKYAAL+ E+KGLDLVRRDWC LSK G + RILSGEP+E VV AIHD + LA +R G V +E+++IT+GLN++ +Y +A ++PH+QVA M+ GK V+ G+HIP+VIC+
Sbjct: 78 LPPDPENIDDKGVVPKVIRTIINRRVQVKQLLKQE--TDVGKKQQLDIRQKALKLTANSLYGCLGFSSSRFHAQPIAALVTAKGRQILQRTVDLAENNMGLEVIYGDTDSIMIDTKCTDLKEVNEIGKKVVNECNKLYRTLELEMDGVFKTMLLLKKKKYAALVVNEAKDGTVTLTKEMKGLDLVRRDWCGLSKTTGEIILDRILSGEPKEVVVKAIHDCLETLAVRMRTGEVEVEEYIITKGLNKSIKDYPDAKSQPHLQVAKRMLTEGKMVNTGDHIPFVICN 360
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA) HSP 1 Score: 337 bits (865), Expect = 2.190e-98 Identity = 190/316 (60.13%), Postives = 223/316 (70.57%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTN-----------------STDLAA--------------VKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
LPPLP +QG+LPRVIK+LV RR VKKLL A DA K+EQLDIRQKALKLTANSMYGCLGF SRF A+PIAALVT GRETLQRTVD+AQ QL LDVIYGDTDSIMINT+ + +AA VK G V++ VNKLY+SLELELDG+FK MLLLKKKKYAAL ELKGLDLVRRDWC LSK+ GRF + +ILSGE R+ VV IH ++ LA +RAG V + Q+ IT+GLN+APHEY +A ++PH+QVAL+MMKAGKPV++G+HI YVIC+
Sbjct: 1030 LPPLPDTALDQGILPRVIKTLVDRRSSVKKLLKAER--DAAKKEQLDIRQKALKLTANSMYGCLGFSHSRFFARPIAALVTAMGRETLQRTVDVAQNQLSLDVIYGDTDSIMINTSIASRDEFDSGTMGTSDENDSVAARKLRLEKDMERIREVKAKGNLVKQAVNKLYKSLELELDGIFKCMLLLKKKKYAALTVSETAEGTLTYAKELKGLDLVRRDWCVLSKETGRFVIDQILSGENRDAVVATIHSYLEELAKRMRAGEVDVRQYAITKGLNKAPHEYPDAKSQPHLQVALSMMKAGKPVNVGDHIEYVICE 1343
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: K0T5T4_THAOC (DNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5T4_THAOC) HSP 1 Score: 328 bits (840), Expect = 1.970e-97 Identity = 180/301 (59.80%), Postives = 220/301 (73.09%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTV---GQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI--------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICDWRCRQHRGASAA 852
LP LP E ++GVLPRVIKSLV RRR VKK + + DA K+E+L+IRQ ALKLTANSMYGCLGF SRF A+PIAALVT GR+TLQRTVDI Q +GLDVIYGDTDSIMINT TDL TV G V+REVN+LY++LELE+DG+F+SMLLLKKKKYAAL ELKGLDLVRRDWC SKD G++ + +ILSGE RE +V IHDH+ +A +R+G + L+++VIT+GLN+ P+EY + + PHV VA M+K K VSIG+HIPYVI + + + G SAA
Sbjct: 427 LPSLPDESLDRGVLPRVIKSLVERRRNVKKFMKSE--KDADKKEELNIRQLALKLTANSMYGCLGFQNSRFYARPIAALVTAMGRQTLQRTVDITQTTIGLDVIYGDTDSIMINTRITDLEEYSTVLELGNKVKREVNRLYKTLELEIDGIFRSMLLLKKKKYAALTITTDGPGGKFKFDKELKGLDLVRRDWCLQSKDSGKYVIDQILSGEDRELIVSNIHDHLENVAKKMRSGELSLDKYVITKGLNKHPNEYPDGKSLPHVHVAKTMLKNHKAVSIGDHIPYVITESKDAEEGGNSAA 725
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: B7S420_PHATC (DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S420_PHATC) HSP 1 Score: 326 bits (836), Expect = 4.530e-96 Identity = 172/286 (60.14%), Postives = 219/286 (76.57%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINT---NSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVI 810
LP LP ++GVLPRVI+SLV RRR VKKLL + ++AV++E+LDIRQKALKLTANSMYGCLGF SRF A+PIAAL+T GRE LQRTVDIAQ ++GLDVIYGDTDSIMINT + DL VK +G+ V++EVN+LYR+LELE+DG+F+SMLLLKKKKYAA ELKGLDLVRRDWC SKD GR+ +ILSG+ + V++ IH H+ LA +RAG +PLE++ IT+GL++ P+EY + ++PHVQVA+ M+K +PV+ G+HIPY+I
Sbjct: 558 LPDLPDTEADRGVLPRVIQSLVERRRTVKKLLKSE--TNAVRKEELDIRQKALKLTANSMYGCLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIYGDTDSIMINTRINDENDLPKVKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYII 841
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS) HSP 1 Score: 326 bits (835), Expect = 5.810e-96 Identity = 176/288 (61.11%), Postives = 218/288 (75.69%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDL---AAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
LPPLP EG ++GVLPRVIK+LV RRR VKK L +A K+E+L+IRQ+ALKLTANSMYGCLGF SRF A+PIAALVT GRETLQRTVD+AQ +GL+VIYGDTDSIMINT TD+ V +G V+REVNKLY +LELE+DGVF+SMLLLKKKKYAA+ E+KGLDLVRRDWC SK+ G+F + +ILSGE +E VV IHDH+ +A +R+G +PL++++IT+GLN+ P+EY +A + PHV VA M+K K VSIG+HIPYVI +
Sbjct: 563 LPPLPDEGLKRGVLPRVIKTLVDRRRNVKKFLKTE--KNAEKKEELNIRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGRETLQRTVDLAQTSIGLEVIYGDTDSIMINTRITDVNEYPRVLELGNQVKREVNKLYNTLELEIDGVFRSMLLLKKKKYAAVTMAEGPGGKMIFDKEMKGLDLVRRDWCIQSKESGKFVLDQILSGEEKEVVVSNIHDHLEKVAQQMRSGELPLDKYIITKGLNKHPNEYPDAKSLPHVYVAKMMLKDHKAVSIGDHIPYVITE 848
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S3P4R5_9STRA (DNA-directed DNA polymerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4R5_9STRA) HSP 1 Score: 302 bits (774), Expect = 2.420e-91 Identity = 164/287 (57.14%), Postives = 209/287 (72.82%), Query Frame = 1
Query: 7 PLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTN---STDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI--------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
PLP +E+GVLPRVI+SLV RR VK +L + +A ++++LDIRQKALKLTANSMYGCLGF SRF A+PIAA VT GRETLQ+TVDIAQ +GLDVIYGDTDSIMINT DL V +G+ V+REVNKLY++LELE+DG+F+SMLLLKKKKYAA ELKGLDLVRRDWC SKD GR+ +ILSG+ E V+ IH H+ LA +R+G + L+++VIT+GL++ P +Y + + PHVQVA M++ +PV+ G+HIPY+I +
Sbjct: 42 PLPDATKERGVLPRVIQSLVEARRNVKNILKSE--QNATRKQELDIRQKALKLTANSMYGCLGFSHSRFFAQPIAAKVTQLGRETLQKTVDIAQNTVGLDVIYGDTDSIMINTRLNQDEDLKKVAGLGEQVKREVNKLYKTLELEIDGIFRSMLLLKKKKYAAKTVEEQKDGKVIKYGQELKGLDLVRRDWCVQSKDTGRYVTEQILSGQENEVVLHNIHSHLEELAKKMRSGELALDKYVITKGLSKHPKDYPDGKSLPHVQVAKQMLQNNRPVNTGDHIPYIITE 326
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S1BTL0_9STRA (DNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA) HSP 1 Score: 312 bits (799), Expect = 8.380e-91 Identity = 166/283 (58.66%), Postives = 211/283 (74.56%), Query Frame = 1
Query: 1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINT---NSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI---------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
L PLP GVLPRVIK+LV RRR VK ++ A D + +LD+RQ+ALKLTANSMYGCLGF SRF A+PIAALVT GRE LQR V++AQ +GL+VIYGDTDSIMINT + ++L V+ +G+ V+REVNKLYR+LELE+DG+++SMLLLKKKKYAAL+ ELKGLDLVRRDWC SKD GRF + +ILSG+ RE V+D IH H+ LA +R + L+++VIT+ L++ P EY +A ++PHV VAL M+K +P+S G+HIPYVIC
Sbjct: 584 LAPLPDGDAGVGVLPRVIKTLVERRRNVKNMMKKA--HDPATKNELDVRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGREVLQRAVEVAQDTVGLEVIYGDTDSIMINTRIRDQSELPKVRELGERVKREVNKLYRTLELEIDGIYRSMLLLKKKKYAALVMNDDGTESKELKGLDLVRRDWCIQSKDSGRFVIDQILSGQEREQVIDNIHRHLEELAKKMRENELALDKYVITKSLSKHPKEYPDAKSQPHVLVALDMLKNNRPISTGDHIPYVIC 864
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S2V5I5_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5I5_9STRA) HSP 1 Score: 287 bits (734), Expect = 2.420e-90 Identity = 146/221 (66.06%), Postives = 176/221 (79.64%), Query Frame = 1
Query: 190 LGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
+GF SRF A+PIAALVT GRETLQRT +A+ QL LDVIYGDTDSIMINT STDLA VK +G V+REVNKLY+ LELELDGVFKSMLLLKKKKYAAL+ ELKGLDLVRRDWC LSK+ G++ V +ILSGE R+TVVD IH+H++ LA+ +RAG + L Q+VIT+GLN+ P++Y +A +PH+QVALAM+K GK V++GNHIPYVIC
Sbjct: 1 MGFSSSRFYARPIAALVTAMGRETLQRTATLAEQQLALDVIYGDTDSIMINTRSTDLAHVKDLGNQVKREVNKLYKLLELELDGVFKSMLLLKKKKYAALVVKEKADGTVTYEKELKGLDLVRRDWCVLSKETGQYVVNQILSGESRDTVVDNIHNHMSELASKMRAGELDLAQYVITKGLNKHPNDYPDAKGQPHLQVALAMIKEGKAVTVGNHIPYVIC 221 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6598.1.3 >prot_P-wetherbeei_contig6598.1.3 ID=prot_P-wetherbeei_contig6598.1.3|Name=mRNA_P-wetherbeei_contig6598.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=432bp MYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDback to top mRNA from alignment at P-wetherbeei_contig6598:553..2848+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6598.1.3 ID=mRNA_P-wetherbeei_contig6598.1.3|Name=mRNA_P-wetherbeei_contig6598.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2296bp|location=Sequence derived from alignment at P-wetherbeei_contig6598:553..2848+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6598:553..2848+ >mRNA_P-wetherbeei_contig6598.1.3 ID=mRNA_P-wetherbeei_contig6598.1.3|Name=mRNA_P-wetherbeei_contig6598.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1296bp|location=Sequence derived from alignment at P-wetherbeei_contig6598:553..2848+ (Phaeothamnion wetherbeei SAG_119_79)back to top |