mRNA_P-wetherbeei_contig6581.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A2Z6DZ58_HYDTE (Heat shock protein Hsp20 n=1 Tax=Hydrogenophilus thermoluteolus TaxID=297 RepID=A0A2Z6DZ58_HYDTE) HSP 1 Score: 103 bits (256), Expect = 6.740e-26 Identity = 51/93 (54.84%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 43 VSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEIQ 321
+ DLPG+ K D+ V +E+GVL IS +R+QE EEKD+ +HRVER +G RS +PE+ADPD + A+F++GVL+V IGK+EA KP K IEI+
Sbjct: 59 IKADLPGLAKDDVHVTLENGVLSISGERKQEKEEKDKKYHRVERVYGRFVRSFTLPEDADPDQISAQFKDGVLEVRIGKSEAVKP--KRIEIK 149
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A2V6FDT2_9BACT (Heat-shock protein Hsp20 n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FDT2_9BACT) HSP 1 Score: 103 bits (256), Expect = 6.920e-26 Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 28 DKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEIQ 321
DKEW V DLP +KK D+ V VE+GVL I+ +R+ E EEKD+ +HR+ERS+G RS ++P+ AD V AEF++GVLKV + K+E KP KA+E++
Sbjct: 54 DKEWLVKADLPEIKKEDVKVTVENGVLTITGERKFEKEEKDKKYHRIERSYGSFTRSFMLPDGADGVKVNAEFKDGVLKVHLPKSEKAKP--KAVEVK 149
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A832HSA0_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832HSA0_9BACT) HSP 1 Score: 102 bits (254), Expect = 1.590e-25 Identity = 48/98 (48.98%), Postives = 74/98 (75.51%), Query Frame = 1
Query: 28 DKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEIQ 321
DKE+ + +LP VKK D++V VE+GVL I+ +R+ E EEK++ +HRVER++G +RS +VPE+AD D V AEF++GVLKV + K+E KP+ ++++
Sbjct: 59 DKEYLIKAELPEVKKEDVSVTVENGVLTIAGERKFEKEEKNKRYHRVERAYGRFERSFLVPEDADGDKVAAEFKDGVLKVHLAKSEKAKPRTIEVKVE 156
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A6N6PZI6_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6PZI6_9BACT) HSP 1 Score: 101 bits (251), Expect = 3.950e-25 Identity = 50/98 (51.02%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 28 DKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEIQ 321
+KEW V DLP V+K D+ V VEDGVL ++ +RR E EEKD+ +HR+ERS+G RS +P+ AD V AEF++GVL+V + KTE KP +A+E++
Sbjct: 54 EKEWLVKADLPEVRKEDVKVTVEDGVLTVAGERRFEKEEKDKKYHRIERSYGNFLRSFALPDAADAGKVTAEFKDGVLRVHLPKTEKAKP--QAVEVK 149
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A101I4A4_9BACT (Heat shock protein Hsp20 n=2 Tax=Bacteria candidate phyla TaxID=1783234 RepID=A0A101I4A4_9BACT) HSP 1 Score: 100 bits (248), Expect = 1.060e-24 Identity = 49/100 (49.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query: 19 AQMDKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEI 318
++ DKE+ V+V+LPG+KK DIT+ +++ VL I +R+ E EEK +TFHR+ERS+G RSV +P+ D D+++A F++G+L +TI K E K K K IEI
Sbjct: 49 SETDKEFFVTVELPGLKKEDITLSIDNNVLTIEGERKSEKEEKGKTFHRIERSYGKFYRSVTLPKKVDEDNIKASFKDGLLNITIPKVE--KEKVKNIEI 146
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A6M1RSR6_9BACT (Hsp20/alpha crystallin family protein n=2 Tax=Verrucomicrobia subdivision 3 TaxID=134621 RepID=A0A6M1RSR6_9BACT) HSP 1 Score: 100 bits (248), Expect = 1.180e-24 Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 28 DKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEI 318
DKE+ + V+LP V K D+ V VE G L IS +R+ E EEK+ +HRVER +G RS +PE+ADPD+VRAEF++GVL+V + K+E +PK +++
Sbjct: 56 DKEYLLKVELPEVSKDDVKVTVEGGTLTISGERKAEKEEKNRKYHRVERFYGRFVRSFTIPEDADPDNVRAEFKDGVLRVHLPKSEKARPKQIEVKV 152
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A139AE35_GONPJ (HSP20-like chaperone n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AE35_GONPJ) HSP 1 Score: 100 bits (250), Expect = 1.730e-24 Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 AIRFFSAQMDKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEI 318
A R ++ K + V DLPGVKK DI + +++ VL I A+R++E+E KDET H VERS+G QR+ +PENA D V A+F GVL++TIGK E KP K IEI
Sbjct: 89 AFRVDVSETPKAYLVKADLPGVKKEDIHLTIDNNVLSIKAERKEESEVKDETHHVVERSYGSFQRAFRLPENAVQDQVDAKFDNGVLQLTIGKEEEKKPDAKRIEI 194
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A832HLP8_9BACT (Hsp20/alpha crystallin family protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832HLP8_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 3.360e-24 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 28 DKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEI 318
D E+ + V+LP VKK D+ V VE G L IS +R+ E EEK FHRVER +G +RS VP+NAD D+V+AEF++GVL+V + K E +PK +++
Sbjct: 56 DAEYLIKVELPEVKKEDVKVTVEGGTLTISGERKAEKEEKGRKFHRVERYYGRFERSFAVPDNADADNVKAEFKDGVLRVHLPKNEKARPKQIEVKV 152
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: HSP11_OXYRB (18.3 kDa class I heat shock protein n=2 Tax=Atripliceae TaxID=1307774 RepID=HSP11_OXYRB) HSP 1 Score: 98.6 bits (244), Expect = 5.870e-24 Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 1
Query: 52 DLPGVKKSDITVRVEDG-VLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEI 318
DLPGVKK ++ V VEDG VLRIS QR +E EEK++T+HRVERS G R +PENA D V+A GVL VT+ K EAPKP+ KAI +
Sbjct: 71 DLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKNEAPKPQVKAINV 160
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Match: A0A3B8Q2D4_9BACT (Heat-shock protein Hsp20 n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q2D4_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 6.390e-24 Identity = 48/100 (48.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 19 AQMDKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERSFGLVQRSVVVPENADPDDVRAEFREGVLKVTIGKTEAPKPKGKAIEI 318
A+ DKEW V DLP VKK D+ + VE+GVL I+ +R+ E EEK + +HR+ER++G RS +P+ AD V AEF++GVLKV + K+E KPK +++
Sbjct: 51 AEDDKEWLVKADLPEVKKEDVKLTVENGVLTITGERKFEKEEKSKKYHRIERAYGNFLRSFTLPDAADAAKVTAEFKDGVLKVHLPKSEIAKPKSIEVKV 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6581.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6581.1.1 >prot_P-wetherbeei_contig6581.1.1 ID=prot_P-wetherbeei_contig6581.1.1|Name=mRNA_P-wetherbeei_contig6581.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp MDKEWRVSVDLPGVKKSDITVRVEDGVLRISAQRRQEAEEKDETFHRVERback to top mRNA from alignment at P-wetherbeei_contig6581:39..362+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6581.1.1 ID=mRNA_P-wetherbeei_contig6581.1.1|Name=mRNA_P-wetherbeei_contig6581.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig6581:39..362+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6581:39..362+ >mRNA_P-wetherbeei_contig6581.1.1 ID=mRNA_P-wetherbeei_contig6581.1.1|Name=mRNA_P-wetherbeei_contig6581.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig6581:39..362+ (Phaeothamnion wetherbeei SAG_119_79)back to top |