mRNA_P-wetherbeei_contig6570.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 120 bits (302), Expect = 7.360e-26 Identity = 72/188 (38.30%), Postives = 100/188 (53.19%), Query Frame = 1
Query: 427 MVSVLNKRAAMPSSKVLCDYLVRFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRVVEDLVERANVTA--INFTTDCEPSMVVAGR-----ETKFPHSGCLAHRLEIVTGIFFGSPGETGSVSVVTLLGIFCFLVFFFQNTPTTILRLNQIC 969
MVS LNKRA +PS + L + K +L ++A M + A+T DGWTSR + Y SLT +I+ +W+L L+LDC KH G+T DL +V +VER ++T I TDCEPSM+ AGR + H GC HR+E T F + LG+ LV ++ + RL Q+C
Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRS-------LGALGLARTLVGRYKKSSQMAARLVQLC 181
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 120 bits (301), Expect = 8.850e-26 Identity = 70/174 (40.23%), Postives = 92/174 (52.87%), Query Frame = 1
Query: 352 DRGALSLPGHAVPTAFHRLIPEFKTMVSVLNKRAAMPSSKVLCDYLVRFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRVVEDLVERANVTA--INFTTDCEPSMVVAGR-----ETKFPHSGCLAHRLEIVTGIFF 852
DR LSL V F PEF +VS LNK+A P + L + + K +L ++A M + A+T DGWTSR + Y SLT +I+ W+L L+L+C KH GST DL R + ++ER +T TDCEPSMV AGR + H GC HR+E T F
Sbjct: 13 DREVLSLASAGVSFLFVEY-PEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVF 185
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 111 bits (278), Expect = 6.260e-23 Identity = 61/162 (37.65%), Postives = 88/162 (54.32%), Query Frame = 1
Query: 418 FKTMVSVLNKRAAMPSSKVLCDYLVRFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRVVEDLVERANVTA--INFTTDCEPSMVVAGRETK----FPHSGCLAHRLEIVTGIFFGSPGETGSVSV 885
F MV L RA +P ++ + L K L ++ TG+ AVT DGWTS D Y T +I+ ++L +L ++C KH G T DLV V+ ++ R +T+ + TTDCEPSMV AGR + H GC HRLE +T FG PG + ++++
Sbjct: 7 FIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALAL 168
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 8.070e-16 Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 535 TGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALDCVKHVGSTCASDLVRVVEDLVERANVTA--INFTTDCEPSMVVAGRETK----FPHSGCLAHRLEIVTGIFFGSPGETGSVSV 885
TG+ A+T DGWT D Y S T +I+ ++L +L L+C KH T DLV V+ ++ R +T + TTDCE SMV AGR + H GC HRLE +T FG PG + ++++
Sbjct: 2 TGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALAL 124
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: UPI000811541D (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI000811541D) HSP 1 Score: 75.9 bits (185), Expect = 2.130e-12 Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query: 412 PEFKTMVSVLNKRAAMPSSKVLCDYLV--RFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALD---CVKHVGSTCASDLVRVVEDLVER---ANVTAINFTTDCEPSMVVAGRETKFPHSGCLAHRLEIV 837
PEFK +++LN +P+ K L L+ +K +L ++ +TVDGWTSRV D ++S+T H+I+E E T LA D CV + ++ + ++ + AN A+ TD +M A R+ + H GC AH L ++
Sbjct: 15 PEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRVSKAFAICLTVDGWTSRVHDSFYSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDEWGIANKIAV-IVTDNAANMKAAVRDGGWRHWGCFAHTLNLI 163
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: UPI000811684C (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI000811684C) HSP 1 Score: 76.3 bits (186), Expect = 7.050e-12 Identity = 54/192 (28.12%), Postives = 89/192 (46.35%), Query Frame = 1
Query: 412 PEFKTMVSVLNKRAAMPSSKVLCDYLV--RFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALD---CVKHVGSTCASDLVRVVEDLVER---ANVTAINFTTDCEPSMVVAGRETKFPHSGCLAHRLEIVTGIFFGSPGETGSVSVVTLLGIFCFLVFFFQNTPTTILRLNQ 963
PEFK +++LN +P+ K L L+ +K +L ++ +TVDGWTSR D +FS+T H+I+E E T LA D CV + ++ + ++ + AN A+ TD +M A R+ + H GC AH L ++ + G + +L +V FF+ + +L
Sbjct: 15 PEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDEWGIANKIAV-IVTDNAANMKAAVRDGGWRHWGCFAHTLNLIA--------QAGLTEIQAVLDKVKSIVRFFKKSSYAYAKLKS 197
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: UPI00177D4E93 (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00177D4E93) HSP 1 Score: 77.0 bits (188), Expect = 1.940e-11 Identity = 59/193 (30.57%), Postives = 90/193 (46.63%), Query Frame = 1
Query: 412 PEFKTMVSVLNKRAAMPSSKVLCDYLV--RFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALD---CV----KHVGSTCASDLVRVVEDLVERANVTAINFTTDCEPSMVVAGRETKFPHSGCLAHRLEIVTGIFFGSPGETGSVSVVTLLGIFCFLVFFFQNTPTTILRLNQ 963
PEFK +++LN +P+ K L L+ +K +L ++ +TVDGWTSR D +FS+T H+I+E E T LA D CV +H G + L R + D AN A+ TD +M A R+ + H GC AH L ++ + G + +L +V FF+ + +L
Sbjct: 136 PEFKRFINMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKL-REICDECGIANKIAV-IVTDNAANMKAAVRDGGWRHWGCFAHTLNLIA--------QAGLTEIQAVLDKVKSIVRFFKKSSYAYAKLKN 318
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: UPI001785AF41 (zinc finger BED domain-containing protein 6-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI001785AF41) HSP 1 Score: 68.6 bits (166), Expect = 3.640e-9 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = 1
Query: 415 EFKTMVSVLNKRAAMPSSKVLCDYLVRFKLSLHGDIAAMTTGQKEAV--TVDGWTSRVGDQYFSLTRHFINEQWELTSLALDCV-------KHVGSTCASDLVRVVEDLVERANVTAINFTTDCEPSMVVAGRETKFPHSGCLAHRLEIV 837
EFK +V +LN +PS K + L+ + +I + A+ T+DGWTSR D +FS+T H++ E+ + T LA D + +H G ++ + + +T + TD +M A R + H GC AH L +V
Sbjct: 113 EFKKLVFLLNSNYKLPSRKTISSSLIPATYNETVEIVKKRLERAYAICLTMDGWTSRAQDSFFSVTAHYVVEEEKRTFLASDLLACSAYAERHTGENITKKMIEIFNEWGIYNKITVV--VTDNAANMKAAVRGGGWRHWGCFAHSLNLV 260
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: UPI00146CBE23 (zinc finger BED domain-containing protein 1-like n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146CBE23) HSP 1 Score: 66.2 bits (160), Expect = 5.400e-8 Identity = 52/181 (28.73%), Postives = 83/181 (45.86%), Query Frame = 1
Query: 427 MVSVLNKRAAMPSSKVLCDYLV-RFKLSLHGDI-AAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALDC----VKHVGSTCASDLVRVVED--LVERANVTAINFTTDCEPSMVVAGRETKFP-HSGCLAHRLEIVTGIFFGSPGETGSVSVVTLLGIFCFLVFFFQNTPT 942
MV+ + R +P+ + L V R + A++ ++ A+T DGWTSR + Y ++T HFINE+WEL + AL H G A L + + + + E+ V TD +M++A E F H C AH + + + +V LLG +V FF+ + T
Sbjct: 1 MVNAMEPRYPVPTRQHLTKVCVPRLYAQTKAHVKASLGKAERVALTCDGWTSRTTEAYVTITAHFINEEWELVTYALQTRDMPESHTGRNLAEHLRKALAEWEITEKDPV----IVTDNASNMIIAAEEAAFTLHVKCYAHTVNLA------AQRALKITAVARLLGRVRRIVNFFRRSTT 171
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Match: A0A8B8BQ93_CRAVI (zinc finger BED domain-containing protein 1-like isoform X1 n=4 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BQ93_CRAVI) HSP 1 Score: 65.5 bits (158), Expect = 1.140e-7 Identity = 53/198 (26.77%), Postives = 91/198 (45.96%), Query Frame = 1
Query: 412 PEFKTMVSVLNKRAAMPSSKVLCDYLV-----RFKLSLHGDIAAMTTGQKEAVTVDGWTSRVGDQYFSLTRHFINEQWELTSLALDCV----KHVGSTCASDLVRVVED--LVERANVTAINFTTDCEPSMVVAGRETKFPHSGCLAHRLEIVTGIFFGSPGETGSVSVVTLLGIFCFLVFFFQ--NTPTTILRLNQI 966
P F+ M+S L R P+ L + L+ K L+ A + + + ++T DGWTSR + ++T HF+N+ WEL+S L H G +L V+ D + ++ V ++ ++ ++ V+G + K GC AH L + + P S+ +LG +V +F N T IL+ Q+
Sbjct: 123 PVFRKMLSTLEPRYQPPNRTRLSEELIPALYESIKSKLY---AELQSSEAVSLTCDGWTSRATQSFLTVTCHFVNKNWELSSKILQTDHFEGSHTGQKIGFELKSVMTDWGISDKVGVITVDNASNMTVAVEVSGVDLKL---GCFAHTLNLASNKALNIP------SLDKILGKVRSVVTYFHKSNISTEILKEKQV 308 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6570.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6570.1.1 >prot_P-wetherbeei_contig6570.1.1 ID=prot_P-wetherbeei_contig6570.1.1|Name=mRNA_P-wetherbeei_contig6570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp MVSVLNKRAAMPSSKVLCDYLVRFKLSLHGDIAAMTTGQKEAVTVDGWTSback to top mRNA from alignment at P-wetherbeei_contig6570:1122..2486+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6570.1.1 ID=mRNA_P-wetherbeei_contig6570.1.1|Name=mRNA_P-wetherbeei_contig6570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1365bp|location=Sequence derived from alignment at P-wetherbeei_contig6570:1122..2486+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6570:1122..2486+ >mRNA_P-wetherbeei_contig6570.1.1 ID=mRNA_P-wetherbeei_contig6570.1.1|Name=mRNA_P-wetherbeei_contig6570.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=681bp|location=Sequence derived from alignment at P-wetherbeei_contig6570:1122..2486+ (Phaeothamnion wetherbeei SAG_119_79)back to top |