mRNA_P-wetherbeei_contig6555.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A6H5K5X7_9PHAE (MRG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X7_9PHAE) HSP 1 Score: 210 bits (534), Expect = 3.590e-63 Identity = 104/174 (59.77%), Postives = 133/174 (76.44%), Query Frame = 2
Query: 116 VDTARDTEDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYEPWE 637
VD +DTED+ +VKV +PFTL+KQLV DWE VTQEP+RLV LPR++T A VM +++++K R P Q +R QEL+DG+R+YF+KAL ILLYRQER QYD + PGK S+IYG EHLLR+FVRLP LLA++AL+ EV+Q+Q LA+FLRF+QKN A FF+ EYE E
Sbjct: 119 VDVKKDTEDDSGVTEVKVAMPFTLKKQLVTDWEHVTQEPRRLVKLPREVTAADVMAQYMDSKANRGTPQQTARAQELMDGVRIYFDKALPLILLYRQERTQYDITVQKLPGKSPSEIYGAEHLLRVFVRLPQLLAQSALTPPEVTQVQKLLADFLRFMQKNHAAFFVQEYEDEE 292
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A836CM09_9STRA (Putative chromatin binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM09_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.600e-55 Identity = 93/178 (52.25%), Postives = 125/178 (70.22%), Query Frame = 2
Query: 116 VDTARDTEDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYEPWEVVQA 649
+DT TED+ Q+K+P+PFTL++QLV DWE VTQEP+ L+PLPR T A V+ F+E+K+ C AQ +RF+EL+DGLR+YF++AL ILLY ER + V + G+ AS++YG EHLLRLF +LPALLA+T L+ EV Q+Q KL EFL+++QKN E F +Y V A
Sbjct: 129 IDTKAATEDDSELAQIKLPIPFTLKRQLVQDWENVTQEPRCLLPLPRARTAAHVLDAFIESKRGACTAAQLARFRELVDGLRLYFDRALPLILLYAHEREHHAAVVAHNKGRAASELYGAEHLLRLFTKLPALLAQTNLNSNEVGQLQAKLGEFLKYMQKNAGELFHGDYRVATEVMA 306
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A7S2GFK6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GFK6_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.350e-46 Identity = 87/175 (49.71%), Postives = 118/175 (67.43%), Query Frame = 2
Query: 116 VDTARDTED-EELSGQVKVPLPFTLRKQLVDDWEEVTQ-EPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYEPW 634
+D R E +E + Q+K+PLPFTL+KQLVDDWE ++Q +P LV LPR TV+ V+ +FLE K KR + A+ EL++GLR+YF+ +L ILLY QER Q+ +TK P S+IYG EHLLRLF +LP +L + L+ E +Q+Q L EFL++LQKN A FL YE +
Sbjct: 55 IDVGRALEAADETAPQIKLPLPFTLKKQLVDDWESISQMDPHMLVTLPRKPTVSDVISEFLEFKAKRTSTAKQQHLTELLEGLRIYFDNSLPVILLYPQERQQFADITKQHPDVPVSKIYGAEHLLRLFTKLPHVLGKARLASVESAQLQTNLGEFLKYLQKNHATIFLKNYEEY 229
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A3M6VN61_9STRA (MRG domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN61_9STRA) HSP 1 Score: 158 bits (400), Expect = 7.620e-43 Identity = 81/171 (47.37%), Postives = 117/171 (68.42%), Query Frame = 2
Query: 137 EDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQ------FSRFQELIDGLRVYFEKALGKILLYRQERAQYDHV-TKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYE 628
ED+ L Q+ + +PF+L+KQLV DW+ VTQ P +LVPLPR +V+Q+++ +LE KK + + + Q +++G++ YF++AL ILLYR ER QY + K G SQIYG EHLLRLFVRLP LLA + +S +E+ QIQ +L +FL+F+QKN A +F+ +YE
Sbjct: 141 EDKVLGKQINLQMPFSLKKQLVQDWKNVTQTPPKLVPLPRKPSVSQIIKTYLEFKKSKVRDGEANEVKEYKNIQGIMEGVQSYFDRALSSILLYRIERRQYQELGQKQMDGVPLSQIYGAEHLLRLFVRLPILLASSNISSRELLQIQARLNDFLKFMQKNSAVWFVTDYE 311
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A8K1FHE4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHE4_PYTOL) HSP 1 Score: 158 bits (399), Expect = 8.800e-43 Identity = 77/173 (44.51%), Postives = 114/173 (65.90%), Query Frame = 2
Query: 131 DTEDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKR-------CNPAQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYE 628
D + E + QV + LPF+L+KQLV+DW+ +T EP RLVPLPR VAQ++ +LE KK + + ++ + +++G++ YF++AL ILLYR ER QY + + SQIYG EHL+RLFVRLP LL + ++E+SQIQ +L +FL+++QK+ A FL EY+
Sbjct: 131 DKAEMETARQVALQLPFSLKKQLVEDWKRITHEPYRLVPLPRKPCVAQIITNYLEFKKSKLKADDGGADEKEYKNIESIMEGIQAYFDRALSSILLYRFERQQYQEIKSKNEDTPLSQIYGAEHLIRLFVRLPVLLGSATIPERELSQIQPRLNDFLKYMQKHSASLFLNEYQ 303
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A1Y1I2K4_KLENI (MRG domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2K4_KLENI) HSP 1 Score: 155 bits (392), Expect = 6.260e-42 Identity = 81/167 (48.50%), Postives = 110/167 (65.87%), Query Frame = 2
Query: 125 ARDTEDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEY 625
A + ++EE VK+PL L+KQL+DDW+ VT+ K LVPLPR TV ++QK+LE + K+ + E++DGLR YF+KAL +LLY QER Q++ V S IYG EHLLRLFV+LP LL T + + ++Q+Q KL +FL+FLQKNQ FFL+ Y
Sbjct: 131 ANEAKEEEPEQVVKLPLSSHLKKQLIDDWKHVTENNK-LVPLPRSPTVNDILQKYLEARTKKASSETDDATGEVVDGLRSYFDKALPAMLLYSQERDQFNDVIPEESDISPSNIYGAEHLLRLFVKLPELLVYTNMEEASMAQLQAKLIDFLKFLQKNQTSFFLSSY 296
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A6A3KZZ6_9STRA (MRG domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KZZ6_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.110e-41 Identity = 78/166 (46.99%), Postives = 115/166 (69.28%), Query Frame = 2
Query: 152 SGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQ------FSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVT-KASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYE 628
S Q+ + +PF+L+KQLV+DW+ VTQ P +LVPLPR V+Q+++ +LE KK++ + + F + ++ G++ YF++AL ILLYR ER QY + K S SQIYG EHL+RLFVRLP LLA + ++ +E+ QIQ +L +FL+F+QKN A +F+ EYE
Sbjct: 144 SKQINIQMPFSLKKQLVEDWKHVTQAPHKLVPLPRKPNVSQIVKTYLEFKKRKVHEGEASEEKEFKNIEGVMQGVQSYFDRALSSILLYRMERRQYQELRQKQSEEVPLSQIYGAEHLIRLFVRLPVLLAGSNIAPRELQQIQARLNDFLKFIQKNSAAWFVTEYE 309
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A024GN18_9STRA (MRG domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GN18_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.740e-41 Identity = 75/159 (47.17%), Postives = 109/159 (68.55%), Query Frame = 2
Query: 161 VKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNP---AQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYE 628
V + +PFTL+KQLV+DW+++T +P +LVPLPR +V Q+++ F++ KK + N A + E++ GLR YF++ +G ILLYR ER QY + + +P S++YG EHLLRLFVRLP L +S+Q QIQ LA+FLR +QKN + +F+ EYE
Sbjct: 184 VPITIPFTLKKQLVEDWKQLTHDPYKLVPLPRKPSVKQIIEHFMDYKKSKTNSNADADYQNVNEIMTGLRSYFDRCVGSILLYRMERLQYQTLKEQNPKVPLSELYGAEHLLRLFVRLPILFGNANMSKQTTLQIQTLLADFLRHMQKNTSSWFVVEYE 342
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: A0A225V607_9STRA (Chromatin modification-related protein EAF3 (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V607_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.640e-41 Identity = 76/171 (44.44%), Postives = 116/171 (67.84%), Query Frame = 2
Query: 137 EDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQ------FSRFQELIDGLRVYFEKALGKILLYRQERAQYDHVTKA-SPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYE 628
ED + Q+ + +PF+L+KQLV+DW+ VT P +LVPLPR V+Q+++ +LE KK + + + F + +++G++ YF++AL ILLYR ER QY + K S SQIYG EHL+RLFVRLP LLA + ++ +E+ Q+Q +L +FL+++QKN A +F+ EYE
Sbjct: 143 EDSANAKQINIQMPFSLKKQLVEDWKHVTHAPHKLVPLPRKPNVSQIIKTYLEFKKSKVHDGEASEEKEFKNIEGIMEGVQSYFDRALSSILLYRMERRQYQEMRKKHSEEVPLSQIYGAEHLIRLFVRLPVLLASSNIAPRELHQLQARLNDFLKYIQKNSAAWFVTEYE 313
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Match: H3GNF0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNF0_PHYRM) HSP 1 Score: 157 bits (398), Expect = 6.530e-41 Identity = 80/172 (46.51%), Postives = 119/172 (69.19%), Query Frame = 2
Query: 134 TEDEELSGQVKVPLPFTLRKQLVDDWEEVTQEPKRLVPLPRDITVAQVMQKFLETKKKRCNPAQFSRFQE------LIDGLRVYFEKALGKILLYRQERAQYDHVT-KASPGKDASQIYGCEHLLRLFVRLPALLAETALSQQEVSQIQVKLAEFLRFLQKNQAEFFLAEYE 628
TE+ + Q+ + +PF+L+KQLV+DW+ VTQ P +LVPLPR V+Q+++ +LE KK + + + S +E +++G++ YF++AL ILLYR ER QY + K + SQIYG EHL+RLFVRLP LLA + +S +E+ QIQ +L +FL+F+QKN A +F+ EYE
Sbjct: 134 TEESAAAKQINIQMPFSLKKQLVEDWKNVTQAPHKLVPLPRKPNVSQIIKTYLEFKKSKVHEDEASEEKEYKNIEGIMEGVQSYFDRALSSILLYRMERRQYQELRQKQAEELPLSQIYGAEHLIRLFVRLPVLLASSNISPRELHQIQARLNDFLKFIQKNSAAWFVTEYE 305 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6555.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6555.1.1 >prot_P-wetherbeei_contig6555.1.1 ID=prot_P-wetherbeei_contig6555.1.1|Name=mRNA_P-wetherbeei_contig6555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp MQKFLETKKKRCNPAQFSRFQELIDGLRVYFEKALGKILLYRQERAQYDHback to top mRNA from alignment at P-wetherbeei_contig6555:2..2314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6555.1.1 ID=mRNA_P-wetherbeei_contig6555.1.1|Name=mRNA_P-wetherbeei_contig6555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2313bp|location=Sequence derived from alignment at P-wetherbeei_contig6555:2..2314+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6555:2..2314+ >mRNA_P-wetherbeei_contig6555.1.1 ID=mRNA_P-wetherbeei_contig6555.1.1|Name=mRNA_P-wetherbeei_contig6555.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig6555:2..2314+ (Phaeothamnion wetherbeei SAG_119_79)back to top |