mRNA_P-wetherbeei_contig6549.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6549.1.1
Unique NamemRNA_P-wetherbeei_contig6549.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A836CAK2_9STRA (Cysteine-rich PDZ-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.380e-12
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:    1 CKKKVQNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK KV    HYCQ CAY+KGICAMCG+K+++TS YKMS+
Sbjct:   82 CKSKVTEDKHYCQQCAYQKGICAMCGKKMMDTSEYKMSA 120
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A068S312_9FUNG (Cysteine-rich PDZ-binding protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S312_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 2.320e-12
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK KV Q Q HYCQ CAY++GICAMCG++VL+TSSYK SS
Sbjct:   59 CKNKVHQQQAHYCQHCAYKRGICAMCGKQVLDTSSYKQSS 98
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A1C7N238_9FUNG (Cysteine-rich PDZ-binding protein n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N238_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 3.370e-12
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK KV Q++ HYCQ CAY+KGICAMCG+++LNTS+YK +S
Sbjct:   60 CKNKVHQDKAHYCQECAYKKGICAMCGKQILNTSAYKQTS 99
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A1X2HBT8_SYNRA (Cysteine-rich PDZ-binding protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HBT8_SYNRA)

HSP 1 Score: 62.8 bits (151), Expect = 9.390e-12
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK+KV Q Q HYCQ CAY++GICAMCG++VL+T+SYK S+
Sbjct:   59 CKQKVHQQQAHYCQQCAYKRGICAMCGKQVLDTTSYKQSA 98
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: S2JZ82_MUCC1 (Cysteine-rich PDZ-binding protein n=4 Tax=Mucor TaxID=4830 RepID=S2JZ82_MUCC1)

HSP 1 Score: 62.8 bits (151), Expect = 9.620e-12
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK KV Q++ HYCQ CAY+KGICAMCG++VL+TS+YK SS
Sbjct:   60 CKTKVHQDKAHYCQDCAYKKGICAMCGKQVLDTSAYKQSS 99
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: UPI0015ADB557 (cysteine-rich PDZ-binding protein-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ADB557)

HSP 1 Score: 62.8 bits (151), Expect = 1.060e-11
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    1 CKKKVQNQ-YHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            C++KV  Q  HYCQACAY+KGICAMCG+K+L+T +YK SS
Sbjct:   64 CRQKVHQQGSHYCQACAYKKGICAMCGKKLLDTKNYKQSS 103
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BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A8H7RYN6_9FUNG (Cysteine-rich PDZ-binding protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RYN6_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 1.330e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK KV Q Q HYCQ CAY++GICAMCG++VL+T+SYK SS
Sbjct:   59 CKTKVNQPQAHYCQQCAYKRGICAMCGKQVLDTTSYKQSS 98
[Close]
BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A4Y2NQK3_ARAVE (Cysteine-rich PDZ-binding protein (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NQK3_ARAVE)

HSP 1 Score: 61.2 bits (147), Expect = 2.220e-11
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            C++KV Q   HYCQACAY+KGICAMCG+K+L+T +YK SS
Sbjct:   37 CRQKVHQPGSHYCQACAYKKGICAMCGKKLLDTKNYKQSS 76
[Close]
BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A8H7PQD3_9FUNG (Cysteine-rich PDZ-binding protein n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7PQD3_9FUNG)

HSP 1 Score: 61.6 bits (148), Expect = 2.680e-11
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            CK KV Q++ +YCQ+CAY+KGICAMCG++VL+TSSYK S+
Sbjct:   59 CKSKVHQDKANYCQSCAYKKGICAMCGKQVLDTSSYKQSA 98
[Close]
BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Match: A0A482V8B7_9CUCU (Cysteine-rich PDZ-binding protein n=2 Tax=Endopterygota TaxID=33392 RepID=A0A482V8B7_9CUCU)

HSP 1 Score: 61.6 bits (148), Expect = 2.740e-11
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    1 CKKKV-QNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS 117
            C++KV Q   HYCQ+CAY+KGICAMCG+K+LNT +YK SS
Sbjct:   60 CRQKVHQVGSHYCQSCAYKKGICAMCGKKMLNTKNYKQSS 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6549.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAK2_9STRA1.380e-1266.67Cysteine-rich PDZ-binding protein n=1 Tax=Tribonem... [more]
A0A068S312_9FUNG2.320e-1272.50Cysteine-rich PDZ-binding protein n=2 Tax=Lichthei... [more]
A0A1C7N238_9FUNG3.370e-1267.50Cysteine-rich PDZ-binding protein n=1 Tax=Choaneph... [more]
A0A1X2HBT8_SYNRA9.390e-1267.50Cysteine-rich PDZ-binding protein n=1 Tax=Syncepha... [more]
S2JZ82_MUCC19.620e-1270.00Cysteine-rich PDZ-binding protein n=4 Tax=Mucor Ta... [more]
UPI0015ADB5571.060e-1167.50cysteine-rich PDZ-binding protein-like n=1 Tax=Ste... [more]
A0A8H7RYN6_9FUNG1.330e-1170.00Cysteine-rich PDZ-binding protein n=1 Tax=Mucor ci... [more]
A0A4Y2NQK3_ARAVE2.220e-1167.50Cysteine-rich PDZ-binding protein (Fragment) n=1 T... [more]
A0A8H7PQD3_9FUNG2.680e-1167.50Cysteine-rich PDZ-binding protein n=2 Tax=Umbelops... [more]
A0A482V8B7_9CUCU2.740e-1167.50Cysteine-rich PDZ-binding protein n=2 Tax=Endopter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6549contigP-wetherbeei_contig6549:2972..3396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog36080.S2JZ82
PFAMsCript
Model size120
Max annot lvl4751|Fungi
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Evalue1.58e-12
EggNOG OGsKOG3476@1|root,KOG3476@2759|Eukaryota,3A3MT@33154|Opisthokonta,3P6VU@4751|Fungi,1GUUH@112252|Fungi incertae sedis
DescriptionMicrotubule-associated protein CRIPT
Cds size120
COG categoryZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186921.1257632-CDS-P-wetherbeei_contig6549:2971..30371683186921.1257632-CDS-P-wetherbeei_contig6549:2971..3037Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6549 2972..3037 -
1683186921.1355798-CDS-P-wetherbeei_contig6549:3342..33961683186921.1355798-CDS-P-wetherbeei_contig6549:3342..3396Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6549 3343..3396 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6549.1.1prot_P-wetherbeei_contig6549.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6549 2972..3396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6549.1.1

>prot_P-wetherbeei_contig6549.1.1 ID=prot_P-wetherbeei_contig6549.1.1|Name=mRNA_P-wetherbeei_contig6549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=40bp
CKKKVQNQYHYCQACAYEKGICAMCGRKVLNTSSYKMSS*
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mRNA from alignment at P-wetherbeei_contig6549:2972..3396-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6549.1.1 ID=mRNA_P-wetherbeei_contig6549.1.1|Name=mRNA_P-wetherbeei_contig6549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=425bp|location=Sequence derived from alignment at P-wetherbeei_contig6549:2972..3396- (Phaeothamnion wetherbeei SAG_119_79)
TGTAAGAAGAAGGTGCAAAATCAATACCACTACTGCCAGGCTTGCGCATA
CGAGGTGAGTGGAAAGCTGGCTCTTGGTTCCTCTATATCTCGGCATCATT
AAATCCCAGCGAGAGCTTGGCGCTGAAATCGATGTTCATCATGTGAGGAA
CATCGCCAGTTGAGGAACATCGCCAGTTGAGGAAGGTCGCCAGTCGAAAA
AAGGCGAGGTCGATGGGTAGGCCCGCAAATCTATGTACGGGGGTGCTATG
AGACCTTTGTGGCTGATGGTTACCTGTTGCTTCCTTGCTGTTACCGCGGG
TTTTCGAGTTTCCCTTACGCCCTCCCTTATTTGCCCTCTCCTTCTGACGG
AACGCGCAGAAAGGAATCTGCGCGATGTGCGGCCGGAAGGTGTTAAACAC
GTCGTCGTACAAGATGAGCTCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6549:2972..3396-

>mRNA_P-wetherbeei_contig6549.1.1 ID=mRNA_P-wetherbeei_contig6549.1.1|Name=mRNA_P-wetherbeei_contig6549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=120bp|location=Sequence derived from alignment at P-wetherbeei_contig6549:2972..3396- (Phaeothamnion wetherbeei SAG_119_79)
TGTAAGAAGAAGGTGCAAAATCAATACCACTACTGCCAGGCTTGCGCATA
CGAGAAAGGAATCTGCGCGATGTGCGGCCGGAAGGTGTTAAACACGTCGT
CGTACAAGATGAGCTCATGA
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