mRNA_P-wetherbeei_contig6546.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6546.1.1
Unique NamemRNA_P-wetherbeei_contig6546.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: K8YQB4_NANGC (Plasma membrane ATPase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQB4_NANGC)

HSP 1 Score: 138 bits (348), Expect = 3.000e-36
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N +LSY+ETTKAGDAVAALKASLKP AHVKRDGK++T DAAL+VPGDLVLLG+G A+PADCIVN G IDVD+AALTGESLP
Sbjct:  207 MNASLSYYETTKAGDAVAALKASLKPVAHVKRDGKFVTMDAALLVPGDLVLLGAGAAIPADCIVNHGTIDVDQAALTGESLP 288
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: A0A836CBQ8_9STRA (Plasma membrane ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.410e-35
Identity = 64/82 (78.05%), Postives = 75/82 (91.46%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +NG + ++ET KAG+AVAALKASLKPQAH KRDGKW+T ++AL+VPGDLVLLGSG AVPADCI+N GQIDVD+AALTGESLP
Sbjct:  100 INGFVGFYETNKAGNAVAALKASLKPQAHCKRDGKWVTLESALLVPGDLVLLGSGAAVPADCIINDGQIDVDQAALTGESLP 181
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: A0A4D9D027_9STRA (Plasma membrane ATPase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D027_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.700e-35
Identity = 66/82 (80.49%), Postives = 76/82 (92.68%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N +LSY+ETTKAGDAVAALKASLKP A+VKRDGK+++ DAAL+VPGDLVLLGSGGAVPADC+V   QIDVD+AALTGESLP
Sbjct:  182 MNASLSYYETTKAGDAVAALKASLKPVAYVKRDGKFLSMDAALLVPGDLVLLGSGGAVPADCVVMDSQIDVDQAALTGESLP 263
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: K8YQ29_NANGC (P-type H(+)-exporting transporter n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YQ29_NANGC)

HSP 1 Score: 134 bits (338), Expect = 6.750e-35
Identity = 66/82 (80.49%), Postives = 76/82 (92.68%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N +LSY+ETTKAGDAVAALKASLKP A+VKRDGK+++ DAAL+VPGDLVLLGSGGAVPADC+V   QIDVD+AALTGESLP
Sbjct:  616 MNASLSYYETTKAGDAVAALKASLKPVAYVKRDGKFLSMDAALLVPGDLVLLGSGGAVPADCVVMDSQIDVDQAALTGESLP 697
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: W7U069_9STRA (Plasma membrane ATPase n=4 Tax=Ochrophyta TaxID=2696291 RepID=W7U069_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.250e-34
Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N +LSY+ETTKAGDAVAALKASLKP A+VKRDGK+++ DAAL+VPGDLVLLG+GGA+PADC+V   QIDVD+AALTGESLP
Sbjct:  300 MNASLSYYETTKAGDAVAALKASLKPLAYVKRDGKFLSMDAALLVPGDLVLLGAGGAIPADCVVKDSQIDVDQAALTGESLP 381
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: A0A836C3K7_9CHLO (Plasma membrane ATPase n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C3K7_9CHLO)

HSP 1 Score: 132 bits (332), Expect = 4.340e-34
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N TL ++ET+KAGDAVAALKASLKPQA  KRDGKW   DA+L+VPGDLVLL SGGAVPADC+VN G IDVD+AALTGESLP
Sbjct:   97 INATLGWYETSKAGDAVAALKASLKPQATAKRDGKWTNMDASLLVPGDLVLLASGGAVPADCLVNHGTIDVDQAALTGESLP 178
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: A0A8J9SR62_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SR62_PHATR)

HSP 1 Score: 123 bits (308), Expect = 5.580e-34
Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 1 
Query:    4 NGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            NG++S++ETTKAGDAVAALK+SLKP A  KRDGKW   D  L+VPGD VLLGSG A+PADC VN  +IDVD+AALTGESLP
Sbjct:   69 NGSISFYETTKAGDAVAALKSSLKPSATCKRDGKWQVIDGTLLVPGDTVLLGSGSAIPADCRVNHSEIDVDQAALTGESLP 149
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: D8TZ21_VOLCA (Plasma membrane ATPase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TZ21_VOLCA)

HSP 1 Score: 131 bits (330), Expect = 8.060e-34
Identity = 63/82 (76.83%), Postives = 72/82 (87.80%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N TL ++ETTKAG+AVAALKASLKPQA  KRDGKW+  DAAL+VPGDLVLLGSG  VPADC++N G IDVD+AALTGESLP
Sbjct:  102 INATLGWYETTKAGNAVAALKASLKPQATAKRDGKWVNLDAALLVPGDLVLLGSGSNVPADCLINHGTIDVDQAALTGESLP 183
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BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: D8TZ22_VOLCA (Plasma membrane ATPase (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TZ22_VOLCA)

HSP 1 Score: 130 bits (326), Expect = 2.790e-33
Identity = 62/82 (75.61%), Postives = 72/82 (87.80%), Query Frame = 1 
Query:    1 LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            +N TL ++ETTKAG+AVAALKASLKPQA  KRDGKW+  DAAL+VPGDLVLLGSG  VPADC++N G IDVD++ALTGESLP
Sbjct:   61 VNATLGWYETTKAGNAVAALKASLKPQATAKRDGKWVNLDAALLVPGDLVLLGSGSNVPADCLINHGTIDVDQSALTGESLP 142
[Close]
BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Match: A0A835WXD7_9CHLO (P-type H(+)-exporting transporter n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WXD7_9CHLO)

HSP 1 Score: 130 bits (326), Expect = 2.810e-33
Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 1 
Query:    4 NGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLVLLGSGGAVPADCIVNCGQIDVDEAALTGESLP 246
            N TL ++ETTKAG+AVAALKASLKPQA  KRDG+W T DAAL+VPGDLVLLGSG +VPADC VN GQIDVD++ALTGESLP
Sbjct:  177 NATLGWYETTKAGNAVAALKASLKPQATAKRDGRWRTLDAALLVPGDLVLLGSGASVPADCRVNHGQIDVDQSALTGESLP 257
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6546.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K8YQB4_NANGC3.000e-3681.71Plasma membrane ATPase n=3 Tax=Monodopsidaceae Tax... [more]
A0A836CBQ8_9STRA1.410e-3578.05Plasma membrane ATPase n=1 Tax=Tribonema minus Tax... [more]
A0A4D9D027_9STRA6.700e-3580.49Plasma membrane ATPase n=1 Tax=Nannochloropsis sal... [more]
K8YQ29_NANGC6.750e-3580.49P-type H(+)-exporting transporter n=3 Tax=Nannochl... [more]
W7U069_9STRA1.250e-3478.05Plasma membrane ATPase n=4 Tax=Ochrophyta TaxID=26... [more]
A0A836C3K7_9CHLO4.340e-3478.05Plasma membrane ATPase n=2 Tax=Edaphochlamys debar... [more]
A0A8J9SR62_PHATR5.580e-3472.84Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
D8TZ21_VOLCA8.060e-3476.83Plasma membrane ATPase n=1 Tax=Volvox carteri f. n... [more]
D8TZ22_VOLCA2.790e-3375.61Plasma membrane ATPase (Fragment) n=1 Tax=Volvox c... [more]
A0A835WXD7_9CHLO2.810e-3379.01P-type H(+)-exporting transporter n=1 Tax=Chlamydo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6546contigP-wetherbeei_contig6546:2813..3058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog3067.XP_002951653.1
PFAMsCation_ATPase_N,E1-E2_ATPase,Hydrolase
Model size246
Max annot lvl3041|Chlorophyta
KEGG koko:K01535
KEGG TC3.A.3.3
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.32e-34
EggNOG OGsCOG0474@1|root,KOG0205@2759|Eukaryota,37I59@33090|Viridiplantae,34JNJ@3041|Chlorophyta
EC3.6.3.6
DescriptionPlasma membrane ATPase
Cds size246
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186920.9389193-CDS-P-wetherbeei_contig6546:2812..30581683186920.9389193-CDS-P-wetherbeei_contig6546:2812..3058Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6546 2813..3058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6546.1.1prot_P-wetherbeei_contig6546.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6546 2813..3058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6546.1.1

>prot_P-wetherbeei_contig6546.1.1 ID=prot_P-wetherbeei_contig6546.1.1|Name=mRNA_P-wetherbeei_contig6546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp
LNGTLSYHETTKAGDAVAALKASLKPQAHVKRDGKWITSDAALIVPGDLV
LLGSGGAVPADCIVNCGQIDVDEAALTGESLP
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mRNA from alignment at P-wetherbeei_contig6546:2813..3058-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6546.1.1 ID=mRNA_P-wetherbeei_contig6546.1.1|Name=mRNA_P-wetherbeei_contig6546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig6546:2813..3058- (Phaeothamnion wetherbeei SAG_119_79)
CTCAACGGCACACTAAGCTACCACGAGACAACCAAGGCGGGAGACGCCGT
GGCGGCGCTGAAGGCATCGTTGAAGCCGCAGGCGCACGTGAAGCGCGACG
GCAAGTGGATCACTTCCGACGCCGCGCTGATCGTCCCGGGAGACCTGGTC
CTGCTGGGGTCAGGCGGCGCCGTCCCGGCCGACTGCATTGTGAACTGCGG
GCAGATCGACGTGGACGAAGCGGCGCTCACGGGAGAATCGCTGCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6546:2813..3058-

>mRNA_P-wetherbeei_contig6546.1.1 ID=mRNA_P-wetherbeei_contig6546.1.1|Name=mRNA_P-wetherbeei_contig6546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig6546:2813..3058- (Phaeothamnion wetherbeei SAG_119_79)
CTCAACGGCACACTAAGCTACCACGAGACAACCAAGGCGGGAGACGCCGT
GGCGGCGCTGAAGGCATCGTTGAAGCCGCAGGCGCACGTGAAGCGCGACG
GCAAGTGGATCACTTCCGACGCCGCGCTGATCGTCCCGGGAGACCTGGTC
CTGCTGGGGTCAGGCGGCGCCGTCCCGGCCGACTGCATTGTGAACTGCGG
GCAGATCGACGTGGACGAAGCGGCGCTCACGGGAGAATCGCTGCCC
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