mRNA_P-wetherbeei_contig6537.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6537.3.1
Unique NamemRNA_P-wetherbeei_contig6537.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A536SNF2_9PROT (Pyruvate dehydrogenase (acetyl-transferring) (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SNF2_9PROT)

HSP 1 Score: 425 bits (1092), Expect = 6.160e-148
Identity = 196/238 (82.35%), Postives = 222/238 (93.28%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSA+P+F AANDPD+ ET+EW+DALEAVLE EGP+RA +LL++L+D ARRSGAY+PFS NTAYLNTIPPH+EERSPGDHALEERIRS+ RWNAMVMVAKANK + +LGGHIASFASVGTLFGIGFNHFW+AP E HGGDL+YFQGHS+PGIYARA+LEGRL+EEQ+LNFRR+VDGKGI+SYPHPWLMPDFWQFPTVSMGLGP+Q IY ARFLKY+HARGLA+T NRKVWVFC DGE D
Sbjct:    1 MSALPEFSAANDPDALETQEWLDALEAVLEHEGPQRARFLLEKLVDKARRSGAYIPFSLNTAYLNTIPPHLEERSPGDHALEERIRSFCRWNAMVMVAKANKSDDELGGHIASFASVGTLFGIGFNHFWNAPHEGHGGDLVYFQGHSSPGIYARAFLEGRLSEEQVLNFRREVDGKGISSYPHPWLMPDFWQFPTVSMGLGPIQGIYMARFLKYLHARGLADTGNRKVWVFCGDGEMD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A536W0B8_9PROT (Pyruvate dehydrogenase E1 component n=10 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536W0B8_9PROT)

HSP 1 Score: 436 bits (1122), Expect = 3.240e-145
Identity = 201/238 (84.45%), Postives = 221/238 (92.86%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSA+P+F AANDPD+QET+EW+DALE VLEREGPERAHYLL++L+D ARRSGAY+PFS NTAYLNTIPPH+EERSPGDHALEERIRS+ RWNAMVMVAKANK + +LGGHIASFASVGTLFGIGFNHFWHAP   HGGDL+YFQGHS+PGIYARA+LEGR  EEQLLNFRR+VDGKGI+SYPHPWLMPDFWQFPTVSMGLGP+Q IY ARFLKY+HARG ANTENRKVWVFC DGE D
Sbjct:    1 MSALPEFSAANDPDAQETQEWLDALEGVLEREGPERAHYLLEKLVDKARRSGAYIPFSLNTAYLNTIPPHLEERSPGDHALEERIRSFCRWNAMVMVAKANKSDDELGGHIASFASVGTLFGIGFNHFWHAPHPGHGGDLVYFQGHSSPGIYARAFLEGRFTEEQLLNFRREVDGKGISSYPHPWLMPDFWQFPTVSMGLGPIQGIYMARFLKYLHARGFANTENRKVWVFCGDGEMD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A521XBV8_9PROT (Pyruvate dehydrogenase E1 component n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XBV8_9PROT)

HSP 1 Score: 429 bits (1104), Expect = 1.900e-142
Identity = 202/238 (84.87%), Postives = 218/238 (91.60%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSAVP  PAANDPDS ET+EW+DALEAVLEREG ERAHYLL++LID ARRSGAYLP+ A TAYLNTIPPHMEERSPGD ALE+RIR+Y RWNAM+MVAKANK EGDLGGHIASFASVGTLFGIG NHFWHAP+  HGGDLIYFQGHSAPG+YARA LEGRL +EQL+NFRRDVDGKG+TSYPHPWLMPDFWQFPTVSMGLGP+QAIYQAR+LKY+HARGLANTE RKVW F  DGE D
Sbjct:    1 MSAVPDTPAANDPDSLETQEWLDALEAVLEREGAERAHYLLEKLIDKARRSGAYLPYKAQTAYLNTIPPHMEERSPGDAALEDRIRAYCRWNAMIMVAKANKAEGDLGGHIASFASVGTLFGIGQNHFWHAPSAEHGGDLIYFQGHSAPGVYARALLEGRLTQEQLVNFRRDVDGKGVTSYPHPWLMPDFWQFPTVSMGLGPIQAIYQARYLKYLHARGLANTEKRKVWAFLGDGETD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A2W4K4Q5_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4K4Q5_9PROT)

HSP 1 Score: 427 bits (1099), Expect = 1.090e-141
Identity = 200/241 (82.99%), Postives = 221/241 (91.70%), Query Frame = 1 
Query:    1 MSAVPQFPA---ANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSAVP+ PA   ANDPD+ ET+EW+DALE+VLE+EGPERAHYLL++LI+ ARRSGAY+PFSANTAY+NTIPPH+EER PGD ALEERIRSY RWNAMVMVA+ANK   DLGGHIASFASVGTLFGIGFNHFWHAP E HGGDLIYFQGHSAPG+YARA+LEGRL EEQLLNFRR+VDGKG++SYPHPWLMPDFWQFPTVSMGLGP+Q IY ARFLKY+HARGLA+T NRKVWVFC DGE D
Sbjct:    1 MSAVPEIPAGPAANDPDALETQEWLDALESVLEQEGPERAHYLLEKLIEKARRSGAYIPFSANTAYINTIPPHLEERHPGDSALEERIRSYCRWNAMVMVARANKEHSDLGGHIASFASVGTLFGIGFNHFWHAPHEGHGGDLIYFQGHSAPGVYARAFLEGRLTEEQLLNFRREVDGKGVSSYPHPWLMPDFWQFPTVSMGLGPIQGIYMARFLKYLHARGLADTSNRKVWVFCGDGEMD 241
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A1F3ZA29_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZA29_9PROT)

HSP 1 Score: 423 bits (1088), Expect = 4.230e-140
Identity = 194/238 (81.51%), Postives = 220/238 (92.44%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSA+P   AANDPD  ET+EW++ALEAV EREGPERAH+LL+ LID ARR+G YLPFSA TAY+N+IPP +EERSPGDHA+EERIR++TRWNA+ MVAKANK +G+LGGHIASFAS GTLFGIGFNHFWHAP+E HGGDLIYFQGHSAPG+YARA++EGRL+EEQLLNFRR+VDGKG++SYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKY+HARGLA+T NRKVWVFC DGE D
Sbjct:    1 MSAMPDIQAANDPDLLETQEWLEALEAVTEREGPERAHFLLETLIDAARRAGTYLPFSATTAYINSIPPQLEERSPGDHAIEERIRAFTRWNALAMVAKANKGDGELGGHIASFASAGTLFGIGFNHFWHAPSEGHGGDLIYFQGHSAPGVYARAFMEGRLSEEQLLNFRREVDGKGVSSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYLHARGLADTANRKVWVFCGDGEMD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A1F4A138_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F4A138_9PROT)

HSP 1 Score: 421 bits (1083), Expect = 2.140e-139
Identity = 194/238 (81.51%), Postives = 222/238 (93.28%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSAVP++ AANDPD+QET+EW+DALEAVLEREGP+R HYLL+RLID ARRSGAY+PFSANTAY+NTIPPH+EERSPGDHALE+RIRS+ RWNAMVMVAKANK + +LGGHIA+FASVGTLFGIGFNHFW AP+ +HGGDL+YFQGH++PGIYARA+LEGRL EEQ+ +FRR+VDG GI+SYPHPWLMPDFWQFPTVSMGLGP+QAIYQARFLKY+HARGLA TE+RKVW F  DGE D
Sbjct:    1 MSAVPEYSAANDPDAQETQEWLDALEAVLEREGPQRGHYLLERLIDEARRSGAYVPFSANTAYINTIPPHLEERSPGDHALEDRIRSFCRWNAMVMVAKANKNDDELGGHIATFASVGTLFGIGFNHFWRAPSAHHGGDLVYFQGHASPGIYARAFLEGRLTEEQITHFRREVDGHGISSYPHPWLMPDFWQFPTVSMGLGPIQAIYQARFLKYLHARGLAATESRKVWAFMGDGEMD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A521Z2I5_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z2I5_9PROT)

HSP 1 Score: 419 bits (1077), Expect = 1.860e-138
Identity = 192/238 (80.67%), Postives = 219/238 (92.02%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            M+AVPQFPAAND D+ ET+EW+DALEAVLEREGPERAH+LL+RLID ARRSGAY+PFSANTAY+NTIPPHMEERSPGD ALEERIRSY RWNAMVMV +ANK + +LGGHIASFASVG +FG+G +HFWHAP E HGGDL+YFQGHS+PG+YAR  LEGR++EE+LLNFRR+VDGKG++SYPHPWLMPD+WQFPTVSMGLGP+Q IY ARFLKY+HARGLA+T NRKVWVFC DGE D
Sbjct:    1 MAAVPQFPAANDSDALETQEWLDALEAVLEREGPERAHFLLERLIDKARRSGAYIPFSANTAYINTIPPHMEERSPGDAALEERIRSYCRWNAMVMVVRANKNDDELGGHIASFASVGAMFGVGQHHFWHAPHEGHGGDLVYFQGHSSPGVYARGLLEGRISEERLLNFRREVDGKGVSSYPHPWLMPDYWQFPTVSMGLGPIQGIYMARFLKYLHARGLADTANRKVWVFCGDGEMD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A1F4BVA4_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4BVA4_9PROT)

HSP 1 Score: 419 bits (1077), Expect = 1.860e-138
Identity = 198/238 (83.19%), Postives = 216/238 (90.76%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSA+P+  AANDPDS ETREW+DALE VLEREGPERAHYLL++LID ARRSGAYLPFSA TAYLNTIP HMEERSPGDHALEERIR+Y RWNA+ MVA+ANK + +LGGHIASFASVGTLF +GF+HFW+AP E HGGDLIYFQGHSAPGIYA AYLEGRL EEQL NFRR+VDGKGI+SYPHPWLMPDFW+FPTVSMGLGP+Q IYQARFLKY+HARGLA T NRKVWVFC DGE D
Sbjct:    1 MSALPEIEAANDPDSLETREWLDALEGVLEREGPERAHYLLEKLIDKARRSGAYLPFSATTAYLNTIPLHMEERSPGDHALEERIRAYDRWNALAMVARANKNDDELGGHIASFASVGTLFEVGFSHFWNAPHEGHGGDLIYFQGHSAPGIYAHAYLEGRLTEEQLNNFRREVDGKGISSYPHPWLMPDFWKFPTVSMGLGPIQGIYQARFLKYLHARGLAPTANRKVWVFCGDGEMD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A1F3YG46_9PROT (Pyruvate dehydrogenase E1 component n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YG46_9PROT)

HSP 1 Score: 417 bits (1073), Expect = 6.670e-138
Identity = 191/238 (80.25%), Postives = 220/238 (92.44%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSAVP F A+ DPD+ ET+EW+DALEAV+EREGPERAH+LL  L++ ARRSGA++PFSANTAY+NTIPPH+EERSPGDHALE+RIR+Y RWNAMVMVA+ANK + +LGGHIASFASVGTLFGIG NHFWHAP+ +HGGDL++FQGHSAPG+YARAYLEGRL++EQL NFRRDVDGKG+TSYPHPWLMPDFWQFPTVSMGLGP+QAIYQARFLKY+HARG+A+T NRKVW F  DGE D
Sbjct:    1 MSAVPDFSASGDPDALETKEWLDALEAVIEREGPERAHHLLGTLVEKARRSGAFIPFSANTAYVNTIPPHLEERSPGDHALEDRIRAYCRWNAMVMVARANKNDDELGGHIASFASVGTLFGIGQNHFWHAPSADHGGDLVFFQGHSAPGVYARAYLEGRLSDEQLANFRRDVDGKGVTSYPHPWLMPDFWQFPTVSMGLGPIQAIYQARFLKYLHARGIADTANRKVWAFVGDGETD 238
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BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Match: A0A1F4CYY5_9PROT (Pyruvate dehydrogenase E1 component n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CYY5_9PROT)

HSP 1 Score: 416 bits (1069), Expect = 2.910e-137
Identity = 192/238 (80.67%), Postives = 216/238 (90.76%), Query Frame = 1 
Query:    1 MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARRSGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKANKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPGIYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGLGPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD 714
            MSAVPQ PAANDPD+ ET+EW+DALEAVLEREGPERAH+LL+RL+D ARRSGAY+PFSANTAY+NTIPPH+EERSPGD ALEERIRSY RWNAMVMV +AN+ + +LGGHIASFASVGT+FGIG NHFWHAP E HGGDL+YFQGHS+PG+YAR  LEGRL+EEQL NFRR+VDGKG++SYPHPWLMP +WQFPTVSMGLGP+Q IY ARFLKY+ ARGLA T NRKVWVFC DGE D
Sbjct:    1 MSAVPQSPAANDPDALETQEWLDALEAVLEREGPERAHFLLERLVDKARRSGAYIPFSANTAYINTIPPHLEERSPGDAALEERIRSYCRWNAMVMVVRANRSDDELGGHIASFASVGTMFGIGENHFWHAPHEGHGGDLVYFQGHSSPGVYARGLLEGRLSEEQLANFRREVDGKGVSSYPHPWLMPGYWQFPTVSMGLGPIQGIYMARFLKYLEARGLARTGNRKVWVFCGDGEMD 238
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6537.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536SNF2_9PROT6.160e-14882.35Pyruvate dehydrogenase (acetyl-transferring) (Frag... [more]
A0A536W0B8_9PROT3.240e-14584.45Pyruvate dehydrogenase E1 component n=10 Tax=Betap... [more]
A0A521XBV8_9PROT1.900e-14284.87Pyruvate dehydrogenase E1 component n=2 Tax=unclas... [more]
A0A2W4K4Q5_9PROT1.090e-14182.99Pyruvate dehydrogenase E1 component n=1 Tax=Proteo... [more]
A0A1F3ZA29_9PROT4.230e-14081.51Pyruvate dehydrogenase E1 component n=1 Tax=Betapr... [more]
A0A1F4A138_9PROT2.140e-13981.51Pyruvate dehydrogenase E1 component n=1 Tax=Betapr... [more]
A0A521Z2I5_9PROT1.860e-13880.67Pyruvate dehydrogenase E1 component n=1 Tax=Betapr... [more]
A0A1F4BVA4_9PROT1.860e-13883.19Pyruvate dehydrogenase E1 component n=1 Tax=Betapr... [more]
A0A1F3YG46_9PROT6.670e-13880.25Pyruvate dehydrogenase E1 component n=3 Tax=unclas... [more]
A0A1F4CYY5_9PROT2.910e-13780.67Pyruvate dehydrogenase E1 component n=1 Tax=Betapr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6537contigP-wetherbeei_contig6537:2684..3397 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog760117.JN27_01645
Preferred nameaceE
PFAMsTransketolase_N
Model size714
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00004,RC00027,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00163
KEGG ReactionR00014,R00209,R01699,R03270
KEGG Pathwayko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.1e-125
EggNOG OGsCOG2609@1|root,COG2609@2|Bacteria,1MV21@1224|Proteobacteria,2VIAH@28216|Betaproteobacteria,473JT@75682|Oxalobacteraceae
EC1.2.4.1
DescriptionComponent of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
Cds size714
COG categoryC
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186920.654779-CDS-P-wetherbeei_contig6537:2683..33971683186920.654779-CDS-P-wetherbeei_contig6537:2683..3397Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6537 2684..3397 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6537.3.1prot_P-wetherbeei_contig6537.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6537 2684..3397 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6537.3.1

>prot_P-wetherbeei_contig6537.3.1 ID=prot_P-wetherbeei_contig6537.3.1|Name=mRNA_P-wetherbeei_contig6537.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp
MSAVPQFPAANDPDSQETREWVDALEAVLEREGPERAHYLLQRLIDTARR
SGAYLPFSANTAYLNTIPPHMEERSPGDHALEERIRSYTRWNAMVMVAKA
NKVEGDLGGHIASFASVGTLFGIGFNHFWHAPTENHGGDLIYFQGHSAPG
IYARAYLEGRLNEEQLLNFRRDVDGKGITSYPHPWLMPDFWQFPTVSMGL
GPLQAIYQARFLKYMHARGLANTENRKVWVFCVDGERD
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mRNA from alignment at P-wetherbeei_contig6537:2684..3397+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6537.3.1 ID=mRNA_P-wetherbeei_contig6537.3.1|Name=mRNA_P-wetherbeei_contig6537.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig6537:2684..3397+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTGCCGTTCCCCAATTCCCCGCCGCCAACGACCCCGACTCGCAGGA
GACCCGCGAGTGGGTCGACGCCCTCGAGGCGGTCCTGGAGCGCGAGGGGC
CAGAGCGTGCCCACTACCTGCTCCAGAGGCTGATCGACACGGCGCGCCGC
TCAGGCGCGTACCTGCCGTTCTCCGCGAACACCGCGTACCTGAACACCAT
CCCCCCGCATATGGAGGAGCGTTCCCCGGGCGACCACGCACTGGAGGAGC
GCATCCGCTCCTACACCCGCTGGAACGCCATGGTGATGGTGGCTAAAGCC
AACAAGGTCGAGGGCGACCTCGGTGGGCACATCGCCAGCTTTGCCTCGGT
GGGCACCCTGTTCGGGATCGGCTTCAACCACTTCTGGCACGCGCCGACCG
AGAACCACGGCGGCGACCTGATCTATTTCCAGGGTCACTCGGCGCCGGGC
ATCTATGCCCGCGCGTACCTTGAGGGCCGGCTCAACGAGGAGCAGCTACT
CAATTTCCGCCGCGACGTCGACGGCAAGGGCATCACCTCCTATCCCCACC
CCTGGCTGATGCCGGACTTCTGGCAGTTCCCGACGGTGTCGATGGGGCTG
GGACCGCTACAGGCGATCTACCAGGCGCGCTTCCTCAAGTACATGCACGC
CCGCGGCCTCGCGAACACCGAGAACCGCAAGGTCTGGGTGTTCTGCGTCG
ACGGCGAGAGGGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6537:2684..3397+

>mRNA_P-wetherbeei_contig6537.3.1 ID=mRNA_P-wetherbeei_contig6537.3.1|Name=mRNA_P-wetherbeei_contig6537.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig6537:2684..3397+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCTGCCGTTCCCCAATTCCCCGCCGCCAACGACCCCGACTCGCAGGA
GACCCGCGAGTGGGTCGACGCCCTCGAGGCGGTCCTGGAGCGCGAGGGGC
CAGAGCGTGCCCACTACCTGCTCCAGAGGCTGATCGACACGGCGCGCCGC
TCAGGCGCGTACCTGCCGTTCTCCGCGAACACCGCGTACCTGAACACCAT
CCCCCCGCATATGGAGGAGCGTTCCCCGGGCGACCACGCACTGGAGGAGC
GCATCCGCTCCTACACCCGCTGGAACGCCATGGTGATGGTGGCTAAAGCC
AACAAGGTCGAGGGCGACCTCGGTGGGCACATCGCCAGCTTTGCCTCGGT
GGGCACCCTGTTCGGGATCGGCTTCAACCACTTCTGGCACGCGCCGACCG
AGAACCACGGCGGCGACCTGATCTATTTCCAGGGTCACTCGGCGCCGGGC
ATCTATGCCCGCGCGTACCTTGAGGGCCGGCTCAACGAGGAGCAGCTACT
CAATTTCCGCCGCGACGTCGACGGCAAGGGCATCACCTCCTATCCCCACC
CCTGGCTGATGCCGGACTTCTGGCAGTTCCCGACGGTGTCGATGGGGCTG
GGACCGCTACAGGCGATCTACCAGGCGCGCTTCCTCAAGTACATGCACGC
CCGCGGCCTCGCGAACACCGAGAACCGCAAGGTCTGGGTGTTCTGCGTCG
ACGGCGAGAGGGAC
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