mRNA_P-wetherbeei_contig6534.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: A0A6P3X331_DINQU (uncharacterized protein LOC106743441 isoform X1 n=2 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3X331_DINQU) HSP 1 Score: 88.2 bits (217), Expect = 2.930e-17 Identity = 62/162 (38.27%), Postives = 81/162 (50.00%), Query Frame = 1
Query: 1 GDTAAVTITATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDGPRRSRLAWAAGQPPLFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAELSDSLEAL 486
GDT+++ +GL A + R A F + VTHV+VN A NA + +KYL G+A +W+VS W+ED LLAE+PYE + GPR SRL+ LF G + VG +D S LLRAAGA + DSLEAL
Sbjct: 1610 GDTSSLRFVCSGLAAAQIANVQKFARLHNADYARQFDSVVTHVIVNTS--GAENAAKSTLKYLQGIAHRKWVVSYKWIEDCTDQRRLLAEDPYEATTQNADVNAPGPRNSRLS----DRDLFEGFTFSCVGPYDN---VSLSQYQDLLRAAGATVVDSLEAL 1762
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: A0A0L7R455_9HYME (Breast cancer type 1 susceptibility protein like protein n=2 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7R455_9HYME) HSP 1 Score: 72.8 bits (177), Expect = 6.660e-12 Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 70 LCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDGPRRSRLAWAAGQPPLFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAELSDSLEAL 486
L + + F VTHV+V + N +KYL G+A G+W+VS WV D+LK L++EEPYE D ++L GPR+SRL + LF+G +G +D+ S E LLRA G + DSL+AL
Sbjct: 1436 LAQTVNARYMTQFNQDVTHVIVKTDQEN--NGANKTLKYLQGIAYGKWIVSYQWVMDTLKERRLISEEPYEAV-DSRTLEA-GPRKSRLK----EKDLFQGFAFLCIGPYDD---VSVEQYQDLLRATGGIVVDSLDAL 1563
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: A0A6S7H4M2_PARCT (Breast cancer type 1 susceptibility isoform X1 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H4M2_PARCT) HSP 1 Score: 68.2 bits (165), Expect = 2.670e-10 Identity = 39/134 (29.10%), Postives = 67/134 (50.00%), Query Frame = 1
Query: 70 LCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDGPRRSRLAWAAGQPPLFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAELSD 471
L +R G M+ D TH+++ + + +KYL+G+A G+W+VS W+ +K+G LL E+ YE++GD ++ + P +R P LF G G F+ P + + L+R G ++ D
Sbjct: 1346 LAKRNGGRMSGDVSEETTHIIMPTDSKMQASRKNYTIKYLLGIALGKWIVSQHWITACVKSGRLLDEKQYEVKGDVEAAQSHVPNMARTTRENKGPQLFDGVSVVCFGEFNPAISP--DQVCQLVRYCGGKIID 1477
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: UPI0014792EA5 (breast cancer type 1 susceptibility protein homolog isoform X1 n=5 Tax=Osmia TaxID=124287 RepID=UPI0014792EA5) HSP 1 Score: 68.2 bits (165), Expect = 2.680e-10 Identity = 57/139 (41.01%), Postives = 68/139 (48.92%), Query Frame = 1
Query: 70 LCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDGPRRSRLAWAAGQPPLFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAELSDSLEAL 486
L R M F VTHV+V + N +KYL G+A G+W+VS WV DSLK L+ EE YE D +L P GPR SRL Q LF G G + + S E LLRAAGA + DSL L
Sbjct: 1441 LARMMNAKYLTQFEEEVTHVIVKVD--EGNNGASKTLKYLQGIAHGKWIVSYQWVIDSLKERKLVNEERYEAV-DCLTLEP-GPRNSRLR----QKGLFEGFAFLCKGPYAD---VSVEQYQNLLRAAGATVLDSLNDL 1568
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: A0A2R5G0G9_9STRA (E3 ubiquitin-protein ligase LNX n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0G9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.920e-10 Identity = 41/101 (40.59%), Postives = 53/101 (52.48%), Query Frame = 1
Query: 178 VKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKS--LRPDGPRRSRLAWAAGQPP---LFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAEL 465
+KY+ +A G W+V WV DS A A LAE PYE++GD K+ L DGP+RSR A A + LF G L G F R P + L ++ G L
Sbjct: 989 LKYVRAIAAGLWIVDVRWVRDSANANAWLAEGPYEIQGDMKTIGLSRDGPKRSREAHAQDKDSGKGLFAGVTMFLCGSFAGSRVPPKRDLESIFAMCGGTL 1089
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: A7RG95_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RG95_NEMVE) HSP 1 Score: 65.1 bits (157), Expect = 3.150e-9 Identity = 50/158 (31.65%), Postives = 74/158 (46.84%), Query Frame = 1
Query: 13 AVTITATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDGPRRSRLAWAAGQPPLFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAELSDSLEAL 486
AV+ T L+ + L + G +A +F THV++ R + +KYLMG+A G+W+VS WV +KA ALL E+ YE++GD + + PR +R A +P L + F S+ L LL GA + S E L
Sbjct: 1610 AVSFVTTRLNRDLMGQTRKLAQMYGGRVASEFNKKTTHVIMATDERFRISKTSYTMKYLMGLALGKWIVSHHWVTACIKAKALLPEDQYEVKGDHELGQSHIPRVARQARRKQRPLLLCNYNALCLDEFHGS--VSKAQLYQLLHFCGANICSSTEEL 1765
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: T1JX07_TETUR (Uncharacterized protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1JX07_TETUR) HSP 1 Score: 64.7 bits (156), Expect = 4.020e-9 Identity = 45/152 (29.61%), Postives = 71/152 (46.71%), Query Frame = 1
Query: 16 VTITATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDGPRRSRLAWAAGQPPLFRGTRCTLVGRFDEGRRPSRESLTALLRAAGAELSD 471
+ I +T L + L L + +G + DF + VTH+V + D+ ++KY+ + +W+VS W+ +SLKAG LL EEPYELRG K P+ + + L G G+F P+ E L ++ G + D
Sbjct: 672 ILIASTLLTADQKKTLEKLQKSLGVRITADFPSNVTHLVTKS---DSNKRAVRSLKYMKALLSHKWIVSFDWITESLKAGELLPEEPYELRGTTKQ--PENTLGAPKISRTSKKKLLIGINFYFDGKFKAADLPNLEELKDIVSTGGGTIFD 818
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: A0A6I8NF78_ORNAN (Breast cancer type 1 susceptibility protein homolog n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NF78_ORNAN) HSP 1 Score: 64.7 bits (156), Expect = 4.060e-9 Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 22 ITATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDG-PRRSRLAWAAGQPPLFRGTRCTLVGRFDEGR 411
+ A+GL + + R+ ++ F A THVV+ DA +KY +GVA GRW+VS +WV S + G +LAE +E+RGD + R G PRR+R+A LF G +G F + R
Sbjct: 736 LVASGLTQPELVLVQKFARKTQSILSSQFTAGTTHVVMKT---DAEFVCERTLKYFLGVAGGRWVVSHLWVTQSFQEGRVLAERDFEVRGDVVNGRSHGGPRRARVAQDR---ELFAGLAICCLGPFTDMR 860
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: UPI0018F6B3DA (breast cancer type 1 susceptibility protein n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F6B3DA) HSP 1 Score: 63.9 bits (154), Expect = 7.780e-9 Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 1
Query: 16 VTITATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRPDG-PRRSRLAWAAGQPPLFRGTRCTLVGRFDE 405
++I A+GL + + R+ ++ F A THVV+ DA +KY +GVA GRW+VS +WV S + G +LAE +E+RGD + R G PRR+R+A LF G G F +
Sbjct: 1156 MSIVASGLTQPELVLVQKFARKTQSVLSSQFTAGTTHVVMKT---DAEFVCERTLKYFLGVAGGRWVVSHLWVTHSFQEGKVLAERDFEVRGDVVNGRSHGGPRRARVAQDR---ELFAGLAICCYGPFTD 1280
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Match: UPI0014258008 (uncharacterized protein LOC117112136 isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258008) HSP 1 Score: 63.2 bits (152), Expect = 1.480e-8 Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 1
Query: 28 ATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRDATNAGPAAVKYLMGVACGRWLVSAVWVEDSLKAGALLAEEPYELRGDRKSLRP-DGPRRSRL 336
ATGL + ++ L ++ G A F THV+V DA +KY +G+A +W++S WV D L+AG LL EE YE+ GD S GP+RSR+
Sbjct: 1951 ATGLSRSELKEVEQLAQKSGIPFASTFNNNTTHVIVKT---DANLVCERTLKYFLGIAGKKWVISFKWVRDCLQAGYLLPEEKYEVVGDVASGNDHQGPKRSRM 2051 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6534.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6534.1.1 >prot_P-wetherbeei_contig6534.1.1 ID=prot_P-wetherbeei_contig6534.1.1|Name=mRNA_P-wetherbeei_contig6534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp GDTAAVTITATGLDEASRTKLLGLCRRMGCHMAPDFGAAVTHVVVNAHFRback to top mRNA from alignment at P-wetherbeei_contig6534:133..750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6534.1.1 ID=mRNA_P-wetherbeei_contig6534.1.1|Name=mRNA_P-wetherbeei_contig6534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig6534:133..750- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6534:133..750- >mRNA_P-wetherbeei_contig6534.1.1 ID=mRNA_P-wetherbeei_contig6534.1.1|Name=mRNA_P-wetherbeei_contig6534.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig6534:133..750- (Phaeothamnion wetherbeei SAG_119_79)back to top |