mRNA_P-wetherbeei_contig6533.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6533.1.1
Unique NamemRNA_P-wetherbeei_contig6533.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: D7FPJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ5_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 3.010e-102
Identity = 182/375 (48.53%), Postives = 237/375 (63.20%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLLRARGYAKTELACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRESSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRRYGVADTCDLRQAV--GSTLLFPPVP 1119
            AA  I+ ++RG+ VR  +     A   I+ AYRG+  R   ++  +E    E + ++HYHAL IQ A+RG+ SR+YNY+HARRK YL+EV +AG+ +RA LREH++ L  +     E    A+ +  A+ LHHL ST    GVF      MR+ G                PTIRGV V+ HL    KDLLR RGY K  L  DLNG  R P      R++VQA  PYD   +AA+ +  A++RLK +GP EF AG+RV LAP++RGI+ G  +LD W N + VRGVP  QAE++ PL E++LG+FPE+PF  +VGGNKS+VLPN  FDVILEAEQTGGVVR   GR+RR+G+ DTCD+   V  GSTL FPP P
Sbjct:   35 AATDIKRVYRGKTVRNDLNRKRAAMIRIASAYRGYRGRVRTQQILEEMLARERMAVYHYHALEIQGAFRGYQSRKYNYNHARRKRYLQEVVDAGDAVRAELREHEQALLEERAANKEVADQAKLQATAQNLHHLVSTKSISGVFNS--PYMRNSGRM--------------PTIRGVEVEQHLTISAKDLLRTRGYTKRGLEVDLNGQQRIPLKGLESRRSVQAQDPYDLPKKAAD-LEDALSRLKRVGPREFHAGNRVALAPYQRGISGGTQFLDPWRNPFLVRGVPRDQAEMQRPLNETTLGKFPEKPFHVSVGGNKSTVLPNGIFDVILEAEQTGGVVRTQNGRTRRFGIPDTCDVNDDVVPGSTLFFPPSP 392          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A835YV60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV60_9STRA)

HSP 1 Score: 265 bits (676), Expect = 2.020e-81
Identity = 164/364 (45.05%), Postives = 212/364 (58.24%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFK-PGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLLRARGYAKTELACDLNGTWRAPAPVPGDRQTVQATGPYD-PSGRAA-EAVARAVARLKMLGPPEFRAGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRE--SSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRRYGVADTCDL 1077
            AAV +Q +FRG+RVR   + +  A                       RREAE   +FHYHA  IQ   RG+ SRR  Y HA+R+AYL E+ + GE +RA L  H+E +++++ +RA  Q  A  ++++E LHHL ST   PGVF  P   P                     PTI GVP+D HL   I+DLLR RGY K  L  D+ G  R P   PGDR+++QA+ PYD PS  AA EAV     RLK+LGP  F AG RV    ++RG+++G  +L+ W N Y  RGVP S  +LR P  +  SSLGR P RPF  AVGGN+S+VLPN RFDVI EA+++GG   R  GR+RR+GV DTCD+
Sbjct:   35 AAVSVQRIFRGKRVRDRHKVLNEAVTKXXXXXXXXXXXVRAAALMVARREAELQAVFHYHARSIQRLIRGFVSRRTRYCHAKRRAYLAELVQVGEALRATLLAHEEQMKQEQDQRALQQRQARVQQLSENLHHLVSTKAQPGVFSSPYLHPTEL------------------PTIDGVPIDEHLTRSIRDLLRKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQH---RLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDV 377          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A7S2G8K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8K6_9STRA)

HSP 1 Score: 251 bits (641), Expect = 9.190e-77
Identity = 148/372 (39.78%), Postives = 207/372 (55.65%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLLRARGYAKTELACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRESSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRRYGVADTCDLRQAVGSTLLFPPV 1116
            +A  IQ LFRG+ +R  +  M +A   I R YRG  AR     A K+    EE  IFHYH +++Q A+RG++SRRY + ++ RK Y+  +    E+ RA L  H+E L   ++ERA      E   + + LHHL ST    G++       +                   PT  G+P++ HL T +K+LLR RGY K  L  D+NG+ R P      R +VQA+  YD    AA   A+ + ++  +G  +F AG  V  AP++RG+ DG  Y D W N Y +RG+P SQAEL      +SLG+ P   F  +VGGNKS+VLPN RFDV+L+AE +GGV  RH G + R+GV+DTCD+R       +FPP+
Sbjct:   51 SATRIQRLFRGQFIRAWVEEMRVASIGIERVYRGHAARLIADAAAKDSTLFEEAAIFHYHCIMVQRAFRGYYSRRYYHDYSARKKYIDSIKSKNEDRRATLSAHREALVAADQERAAVAAKEEFEAVTQNLHHLVSTAHIAGIYNTPYMTEQ-------------------PTAMGLPLEHHLRTGVKNLLRTRGYQKRGLVTDINGSRRVPVRPAQSRLSVQASSQYDVPLEAARMEAK-LDKMSHIGGRDFTAGQAVHQAPYRRGLNDGSQYTDPWRNPYMIRGIPKSQAELSQG--RTSLGKAPAVHFHTSVGGNKSAVLPNDRFDVMLDAESSGGVHLRHKGTTNRFGVSDTCDVRD---EDEMFPPI 397          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A7S2W8X7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8X7_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.790e-67
Identity = 138/380 (36.32%), Postives = 201/380 (52.89%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLLRARGYA-------KTELACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRESSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRRYGVADTCDLRQAVGSTLLFPPVP 1119
            +A+ IQ +FRG  VR  +   A A   +       C R      R+ + + +EL IFHYHA+ +Q  +RG++SRR+ + ++ RK YL  V   G+ +R  LR+++E    +E ER   +   E +   E LHHL ST+ T GVF     P                     P + GVP++ HL    K  +R  G         K +L+  ++G+   P P P  R ++QA+ PYD   R  E + R + +L  +G  +F    R   A ++RGI +GC Y+D W N Y VRGVP SQAEL      +++G+ P   F  +VGGNKS+VLPN  FDV+L+AE +GGV +RH   + R+GV D CD+R+      LFPP+P
Sbjct:   20 SAMTIQRVFRGSVVRSTVSFRAAAAGRVXXXXXXHCCRLAAGLRRRRQEDEQELAIFHYHAIALQRTFRGFYSRRHYHDYSARKKYLETVRAKGDALRETLRQYREAQIEEEDERLRNEQAQEFQEATERLHHLVSTSATAGVFNSPFAPE-------------------VPAVEGVPLETHLRAGAKAYVRRTGLQASSRRRQKADLSMRMSGSRNVPLPQPTKRISLQASVPYDVE-RDQEQMDRRLTKLGFVGGKDFTVSQRAKEATYRRGINEGCQYMDPWQNPYLVRGVPQSQAELSQS--RTTIGKAPAVHFYTSVGGNKSTVLPNGLFDVMLDAEYSGGVCQRHKANTVRFGVPDNCDIRE---EEALFPPIP 374          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A8K1FM83_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM83_PYTOL)

HSP 1 Score: 150 bits (378), Expect = 1.720e-38
Identity = 114/337 (33.83%), Postives = 167/337 (49.55%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLLRARGYAKTELACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKR----GITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRESSLGRFP---ERPFVAAVGGNKSSVLPNKRFDV 990
            AA+ IQ LFRG+RVR  I     A   ++R YRG  AR+  R+ R++ +  ++  +FHY+A++IQ   RG HSRR       RKAY+RE+A  G+ MR  L E+    +++ER+  +     E  ++++ LHHL ST    GV+     PM                 A   T  G+PV+ H+    K L+       T+L      T   P P P ++ ++QA  PYD   RA     +   +L+ +   +F+A         K+    GI  G  YLD W N Y  RG+P ++ +L   L  ++LG+ P   E+PF    GGNKS V  N RFDV
Sbjct:   35 AAIHIQRLFRGQRVRATITTQRNAEIVLARVYRGHLARRRCRRLREQEQLWQQHAVFHYYAIIIQKVLRGVHSRRTKLDFRVRKAYIREIAAKGDAMRQQLEENLRRQQQEERQANDEAARHELAQVSQNLHHLVSTRAIAGVYN---SPM----------------LASTATAFGIPVETHIRENTKTLI------STQLTTATAPTKLIPYP-PSNKASLQAAAPYDAPLRAVR-TQKKYHKLRRISAQDFQAVHNSNQDTLKKLAAPGINAGVEYLDDWKNPYKKRGIPRAKEDLLPQL--TTLGKPPKEKEKPFYLTSGGNKSKVYANDRFDV 342          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A7S3XN12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN12_HETAK)

HSP 1 Score: 124 bits (312), Expect = 5.530e-31
Identity = 65/119 (54.62%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  763 AGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRESSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRRYGVADTCDLRQAVGSTLLFPPVP 1119
            AG RV  AP++RG+ +G PYLD W N Y  RGVP S  EL    R +SLGR PE PF   VGGNKS+V PN  F+ ILEAE TGG  +RH GR+ RYGV DT D+R+      ++PP P
Sbjct:    1 AGQRVREAPYRRGVGEGAPYLDPWKNPYRKRGVPQSGEELAGGPR-TSLGRHPEVPFYTRVGGNKSTVHPNDTFETILEAESTGGAAQRHKGRTLRYGVPDTADVRET-SQLYMYPPNP 117          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A812T872_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T872_SYMMI)

HSP 1 Score: 124 bits (310), Expect = 1.650e-29
Identity = 83/207 (40.10%), Postives = 109/207 (52.66%), Query Frame = 1
Query:  520 IRGVPVDVHLATCIKDLLRARGYAKTE-LACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKRGITDGC---PYLDSWLNQYTVRGVPVSQAEL-RLPLRESSLGRF---PERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRRYGVADTCDLRQAVGSTLLFPPV 1116
            +  VPV+ +L   +KDL+R RG  K   L  DLNGT R P      R ++QA+ PYD   +      + +  L+      F  G R  +   ++ +T  C   PY+D W N    RGVP  QA L  + L  ++   F   PERPF     GNKS+VLPN  FD I EAE++GGV RRHL  + RYG+ + CD R A G  L  PPV
Sbjct:    2 VNEVPVEEYLRGAVKDLIRTRGVTKKNMLTRDLNGTLRVPVKGRKHRLSLQASVPYDVLEKERHRQ-KVLHNLQTKDKGTFHTGGRTDVL--EQAVTPLCADDPYMDQWSNPLLKRGVPRDQAHLTEVALSRTTAPTFVPAPERPFYVTGSGNKSAVLPNDLFDTIAEAEESGGVTRRHLSSTTRYGLPENCDDRIA-GGDLPVPPV 204          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A482SGT5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGT5_9ARCH)

HSP 1 Score: 118 bits (295), Expect = 1.590e-27
Identity = 73/194 (37.63%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  514 PTIRGVPVDVHLATCIKDLLRARGYAKTELACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKR-GITDGCPYLDSWLNQYTVRGVPVSQAELRLP--LRESSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLG-RSRRYGVADTCDLRQ 1083
            PT+  +PV+ H+   +KDLLR RG AK  L  D N T R P  V   R ++QA+  YD   +  E   +   R   +    F  G +  +  +K   +  G PYLD+W N   V+GVP SQ +L     L++      PE+ FV+ VGGN+S+ L N  FDVI +A++TGG ++RHLG  + R+G+  + D R+
Sbjct:    2 PTMNALPVEDHIRGVVKDLLRTRGIAKRGLVPDTNNTLRIPLKVLKSRLSIQASSHYDAIMQE-ERKQKMTHRYISMSARNFLGGGKTTIINNKDVPLAVGEPYLDAWANPMLVKGVPTSQHQLTESSRLQKPLFAAPPEKAFVSRVGGNRSTALANDLFDVIADAQETGGAIQRHLGTNTARFGLPASADHRE 194          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A1V9ZC29_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC29_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.890e-27
Identity = 96/303 (31.68%), Postives = 138/303 (45.54%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLLRA---RGYAKTELACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGPPEFRAGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRE 900
            AA+CIQ +FRG+RVR  I  M  A   I+R +RG   R    KA++ R+  E+   +H+ A +IQ  YRG+HSR+Y ++ A RK YLRE+   G  +RA L+   E     E ER E +   E  +I + LHHL  T VTPGVF     P                     PT  GVPV+ H+ T   +LL     +  AK++L          P P P  R ++QA+  Y+      E   R    +           + V    + + I +G  YLD   + +  RG   S    + P ++
Sbjct:   35 AAICIQRIFRGQRVRASISRMRTAEILIARVFRGHLGRHKALKAKRRRKHLEKQARYHHLARIIQTCYRGFHSRKYVHNFATRKTYLRELEAKGNALRATLQRRLEEQREMEFERVEEESRQELVKITQNLHHLVGTKVTPGVFSSPYAPSM-------------------PTAFGVPVETHIRTNTLNLLSTIPKKLVAKSQLK---------PKP-PAVRTSIQASSVYNIDRVYEERDKRYQKAMNFTQDKFIPVVNPVVTYTYDKSINNGVDYLDPRKHPFCQRGASKSSTAPKSPKQD 308          
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Match: A0A1V9YU99_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YU99_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.070e-26
Identity = 78/191 (40.84%), Postives = 99/191 (51.83%), Query Frame = 1
Query:    1 AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERREAEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAALREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKPMRSGGNSCGGSSXXXGSAAGPPTIRGVPVDVHLATCIKDLL 573
            AA+CIQ LFRG+RVR  I  M  A   I+R +RG   R    KA + RR  E+   FH+ A +IQ  YRG++SRRY ++ A RK YLRE+   G  +RA L +  E     E ER E +   E  +I + LHHL  T VTPGVF     P                 A   PT  GVPV+ H+ T   +LL
Sbjct:   41 AAICIQRLFRGQRVRATISRMQTAEILIARVFRGHLGRHKAHKAARRRRHTEKQARFHHLARIIQTRYRGFYSRRYVHNFATRKTYLRELEAKGNALRATLAKRLEDQRAMELERVEEESREELVKITQNLHHLVGTAVTPGVFS---SPF----------------AQSRPTAFGVPVETHIRTNTLNLL 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6533.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FPJ5_ECTSI3.010e-10248.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV60_9STRA2.020e-8145.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2G8K6_9STRA9.190e-7739.78Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2W8X7_9STRA3.790e-6736.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1FM83_PYTOL1.720e-3833.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3XN12_HETAK5.530e-3154.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812T872_SYMMI1.650e-2940.10Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A482SGT5_9ARCH1.590e-2737.63Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A1V9ZC29_9STRA1.890e-2731.68Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9YU99_9STRA1.070e-2640.84Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6533contigP-wetherbeei_contig6533:2..1530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FPJ5
Preferred nameSPATA17
PFAMsIQ
Model size1119
Max annot lvl2759|Eukaryota
KEGG koko:K08515
KEGG Pathwayko04130,map04130
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0005488,GO:0005515,GO:0008092,GO:0017022,GO:0032027
Exons2
Evalue4.94e-103
EggNOG OGs2CGXK@1|root,2QS0S@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_000820.1
Descriptionmyosin light chain binding
Cds size1119
COG categoryS
BRITEko00000,ko00001,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186920.4351468-CDS-P-wetherbeei_contig6533:1..3341683186920.4351468-CDS-P-wetherbeei_contig6533:1..334Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6533 2..334 +
1683186920.4454296-CDS-P-wetherbeei_contig6533:744..15301683186920.4454296-CDS-P-wetherbeei_contig6533:744..1530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6533 745..1530 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6533.1.1prot_P-wetherbeei_contig6533.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6533 2..1530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6533.1.1

>prot_P-wetherbeei_contig6533.1.1 ID=prot_P-wetherbeei_contig6533.1.1|Name=mRNA_P-wetherbeei_contig6533.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=373bp
AAVCIQGLFRGRRVRVLIRGMALACCHISRAYRGFCARKYVRKARKERRE
AEELGIFHYHALVIQCAYRGWHSRRYNYSHARRKAYLREVAEAGEEMRAA
LREHQETLERQERERAEAQFVAESRRIAEGLHHLASTTVTPGVFKPGRKP
MRSGGNSCGGSSGSSGSAAGPPTIRGVPVDVHLATCIKDLLRARGYAKTE
LACDLNGTWRAPAPVPGDRQTVQATGPYDPSGRAAEAVARAVARLKMLGP
PEFRAGSRVPLAPHKRGITDGCPYLDSWLNQYTVRGVPVSQAELRLPLRE
SSLGRFPERPFVAAVGGNKSSVLPNKRFDVILEAEQTGGVVRRHLGRSRR
YGVADTCDLRQAVGSTLLFPPVP
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mRNA from alignment at P-wetherbeei_contig6533:2..1530+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6533.1.1 ID=mRNA_P-wetherbeei_contig6533.1.1|Name=mRNA_P-wetherbeei_contig6533.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1529bp|location=Sequence derived from alignment at P-wetherbeei_contig6533:2..1530+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGTATGCATCCAGGGGCTTTTCCGAGGTCGCAGAGTCCGTGTCCT TATTCGGGGAATGGCGCTGGCATGCTGCCACATATCTCGAGCCTACCGAG GTTTCTGCGCCCGCAAGTACGTTCGAAAGGCGAGAAAAGAGCGGCGAGAG GCAGAAGAGCTCGGCATCTTCCACTACCACGCCCTTGTAATACAGTGCGC CTACCGCGGGTGGCACAGCCGACGGTATAACTACAGCCACGCGAGACGGA AAGCATACCTTCGGGAAGTCGCAGAGGCCGGGGAAGAGATGCGGGCGGCA TTGCGGGAGCACCAAGAAACGTTGGAGCGGCAGGTCTGTCTGTATGTGAG AATTTGGTGATTCCAATGGGAAAAAAAGAAGGAAGAATTTAGATTACCAA GGTTTTAAAGGAAAAAGGCAGCGCTTGGTTGTGTTCTCGCTGCTTCGTTC CTAAAATTGATGAGGCTTCATCGGGTATGGAGAAAATGATAAATGTCTTC GATTCCTGCGCCAGTTCTACTCAGTGTCGTTGTAGAAGTCCCTTGTTGAG CCATCGTCTATCCTTAACATGACCTATGCTATTCGCTTGCAGTGATGAGG CTTTATCCTGCGAGGAGAAATATATAACTATCTTCTCTTCTTGTACCCTC TTAAGTCAGCGCGATTATGACGTCCTTTGATCACCCATTGCACATGCTTG ATTATGCTGTGCGGGACACTGTATCAAACCTTCCCGCCTTCAGGAGCGAG AACGGGCCGAGGCGCAGTTTGTCGCCGAATCTCGTCGCATCGCCGAGGGA TTGCACCACCTCGCTAGCACAACCGTTACGCCCGGCGTCTTCAAGCCCGG AAGGAAACCGATGCGAAGCGGCGGCAATAGCTGCGGCGGCAGCAGCGGTA GCAGCGGCAGCGCCGCCGGCCCGCCGACCATCCGCGGCGTCCCCGTCGAC GTGCACCTGGCGACGTGCATTAAGGACCTGCTCCGGGCCCGCGGCTACGC CAAAACGGAGCTGGCGTGCGACCTCAATGGAACCTGGCGAGCACCGGCGC CGGTTCCAGGAGACCGGCAGACGGTACAGGCCACGGGGCCGTACGACCCG TCGGGCCGCGCGGCGGAAGCGGTTGCGCGTGCCGTCGCCCGCCTCAAGAT GCTGGGCCCGCCGGAATTCCGCGCCGGCAGCCGCGTGCCGTTGGCGCCGC ACAAGCGGGGCATCACAGATGGCTGTCCGTATCTGGACTCCTGGTTGAAT CAGTACACCGTCCGGGGCGTGCCAGTCAGCCAGGCGGAGCTGCGCCTGCC GCTGCGGGAGTCTTCTCTGGGAAGGTTCCCGGAACGGCCCTTTGTCGCCG CCGTCGGCGGCAATAAATCCTCCGTGCTGCCCAACAAGCGCTTCGACGTC ATCCTCGAGGCGGAACAGACGGGTGGCGTCGTCCGGCGGCACCTTGGGCG GTCCCGCCGCTATGGCGTCGCCGACACGTGCGATTTGCGGCAGGCCGTCG GCTCGACGTTGCTCTTCCCGCCAGTGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6533:2..1530+

>mRNA_P-wetherbeei_contig6533.1.1 ID=mRNA_P-wetherbeei_contig6533.1.1|Name=mRNA_P-wetherbeei_contig6533.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1119bp|location=Sequence derived from alignment at P-wetherbeei_contig6533:2..1530+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGTATGCATCCAGGGGCTTTTCCGAGGTCGCAGAGTCCGTGTCCT
TATTCGGGGAATGGCGCTGGCATGCTGCCACATATCTCGAGCCTACCGAG
GTTTCTGCGCCCGCAAGTACGTTCGAAAGGCGAGAAAAGAGCGGCGAGAG
GCAGAAGAGCTCGGCATCTTCCACTACCACGCCCTTGTAATACAGTGCGC
CTACCGCGGGTGGCACAGCCGACGGTATAACTACAGCCACGCGAGACGGA
AAGCATACCTTCGGGAAGTCGCAGAGGCCGGGGAAGAGATGCGGGCGGCA
TTGCGGGAGCACCAAGAAACGTTGGAGCGGCAGGAGCGAGAACGGGCCGA
GGCGCAGTTTGTCGCCGAATCTCGTCGCATCGCCGAGGGATTGCACCACC
TCGCTAGCACAACCGTTACGCCCGGCGTCTTCAAGCCCGGAAGGAAACCG
ATGCGAAGCGGCGGCAATAGCTGCGGCGGCAGCAGCGGTAGCAGCGGCAG
CGCCGCCGGCCCGCCGACCATCCGCGGCGTCCCCGTCGACGTGCACCTGG
CGACGTGCATTAAGGACCTGCTCCGGGCCCGCGGCTACGCCAAAACGGAG
CTGGCGTGCGACCTCAATGGAACCTGGCGAGCACCGGCGCCGGTTCCAGG
AGACCGGCAGACGGTACAGGCCACGGGGCCGTACGACCCGTCGGGCCGCG
CGGCGGAAGCGGTTGCGCGTGCCGTCGCCCGCCTCAAGATGCTGGGCCCG
CCGGAATTCCGCGCCGGCAGCCGCGTGCCGTTGGCGCCGCACAAGCGGGG
CATCACAGATGGCTGTCCGTATCTGGACTCCTGGTTGAATCAGTACACCG
TCCGGGGCGTGCCAGTCAGCCAGGCGGAGCTGCGCCTGCCGCTGCGGGAG
TCTTCTCTGGGAAGGTTCCCGGAACGGCCCTTTGTCGCCGCCGTCGGCGG
CAATAAATCCTCCGTGCTGCCCAACAAGCGCTTCGACGTCATCCTCGAGG
CGGAACAGACGGGTGGCGTCGTCCGGCGGCACCTTGGGCGGTCCCGCCGC
TATGGCGTCGCCGACACGTGCGATTTGCGGCAGGCCGTCGGCTCGACGTT
GCTCTTCCCGCCAGTGCCG
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