mRNA_P-wetherbeei_contig6527.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S4N6E6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N6E6_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.780e-12 Identity = 60/229 (26.20%), Postives = 98/229 (42.79%), Query Frame = 1
Query: 1 VWTEPETGLSFLRELPG----DGRGRPTQTLIGGGVYTKALM-FKIYALAFYADVPRVLAAPELQAFRDAAAAXXXXXXXXXXXXXXXXXXXXASLMSAMARSSSFDRSISLRLSM-----AVSRDTAIAAMNSDFDLTPLEKRLLVGTALKS----------------ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVGGN-PVSPPSRD 606
VW +P+TGL +L +L G D TL+G G+YT+ + K+Y A+YA VL P F A A + + + + ++R S+ ++ + ++S F + +L K AD CC GTEL+FT R++GDLE+ +DGR++D + GL ++ Y+ G+ P+S +RD
Sbjct: 536 VWEDPQTGLEYLTDLSGYLGHDRMETGRHTLMGVGLYTRTVFNIKVYGCAYYAAKRDVLGHPGYAPFATMTAEELRVRDDFYELLMGFPSEEGAVDRTVFLKMNMQLATETMRTSLDADWSQMTTEQKNMLISSSFKERAANEAMLRKIRSKENTSRCSCGQSAPPEYEADPGCCARGTELVFTWRKNGDLELRIDGRVMDIFKEPGLGRAIFYEYLRGDEPMSMDARD 764
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S3L295_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L295_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 7.520e-12 Identity = 63/227 (27.75%), Postives = 96/227 (42.29%), Query Frame = 1
Query: 1 VWTEPETGLSF----LRELPGDGRGRPTQTLIGGGVYTKALMFKIYALAFYADVPRVLAAPELQAFRDAAAAXXXXXXXXXXXXXXXXXXXXASLMSAMARSSSFD--RSISLRLSMAVSRDTAIAAM-NSDFDLTPLEKRLLVGTALKS-----------------ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVG-GNPVSPPSRD 606
+WT+P+TGL + R L D + QTL+G G Y K + K+Y +AFY VLA P + + +++ + + D RS SL + D A A+ NS P L A ++ AD CC GTEL FT ++G+LEV L+G L++T +++G+ Y+ +P+SP RD
Sbjct: 410 IWTDPQTGLEYPTDLTRYLKNDRKAEGRQTLMGVGQYIKGYVIKVYGVAFYVSKRDVLADPFFADYAHMSPDELKTHPEFYEHLRTDAENFERTIVIKINMQLAADTIRS-SLHADWKMLTDEAKNALINSSLQPRPATPEFLEVVADETNNPGRCSCGQVCPPEYEADLDCCARGTELAFTWLKTGELEVRLNGELMETFPRPDIAKGILFEYLRYDDPISPQFRD 635
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7R9WC84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WC84_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.830e-12 Identity = 57/218 (26.15%), Postives = 93/218 (42.66%), Query Frame = 1
Query: 1 VWTEPETGLSFLRELPG----DGRGRPTQTLIGGGVYTKALM-FKIYALAFYADVPRVLAAPELQAFRDAAAAXXXXXXXXXXXXXXXXXXXXASL---MSAMARSSSFDRSISLRLSMAVSRDTAIAAMNSDFDLTPLEKRLLVGTALKS----------------ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVGGN 582
VW +P+T L +L +L G D R + TL+G G+YT+ + K+Y AFYA VLA P F A+ +L M+ + + S+ S+ ++ ++S F ++R+L K AD CC GTEL+FT ++ G LE+ +DGR++D G+ ++ Y+ G+
Sbjct: 168 VWEDPQTKLEYLTDLSGYLGHDRREKGRHTLMGVGLYTRTVFNIKVYGCAFYATKRDVLADPSYAPFAAMDASDLRSRDDFYDLLMSESSRVDRTLFLQMNMQLATETMRTSLDADWSLMTPEHKSLL-ISSSFRERNADERMLRRIKSKENSSRCSCGQKAPPEYEADPECCARGTELVFTWKKDGTLELRIDGRIMDAFDDPGIGRAIFYEYLRGD 384
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A6U3P9D6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3P9D6_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.880e-9 Identity = 62/232 (26.72%), Postives = 102/232 (43.97%), Query Frame = 1
Query: 1 VWTEPETGLSFLRELP---GDGR---GRPTQTLIGGGVYTKALM-FKIYALAFYADVPRVLAAPELQAFRDAAA-----AXXXXXXXXXXXXXXXXXXXXASLMSAMARSSSFDRSISLRLSMAVSRDTAIAAM-NSDFDLTPLEKRLLV----------------GTALKSADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYV-GGNPVSPPSRD 606
+W +P TGL +L +L G R GR TL+G G + K ++ K+Y +A Y VLA P ++A L+ + S+ SL+ + D + ++ F ++++L A +AD +CC GT+L+FT R++GDLEV LDGRL+D+ L++G++ Y+ G +P+S +RD
Sbjct: 539 LWEDPATGLRYLTDLCEYLGHERKEVGR--HTLVGVGQFVKTMLKIKVYGVALYLSKRDVLADPNFVPHARSSADELRQGDGLYNYLMNAPSSSGGRIDRTLLLKLNMQLSTETMRTSLQADWKLLTDEHKEMLVSTSFKPRDADEKMLQKIKSEENSSNCSCGQNAPAEYNADPSCCARGTDLVFTWRKNGDLEVRLDGRLIDSFPVPDLAKGIFYEYLRGDDPMSVDARD 768
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S2UL26_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL26_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.510e-8 Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 430 ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVGGNPVSPPSRD 606
AD +CC GTEL FT R++GDLEV LDGR+VD+ ++ G++ Y+ +P+S +R+
Sbjct: 459 ADPSCCARGTELAFTWRKTGDLEVRLDGRIVDSWPRPDMASGIFFEYLSDDPISRDARE 517
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S2N3G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N3G5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.640e-8 Identity = 27/60 (45.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 430 ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYV-GGNPVSPPSRD 606
AD +CC GT+L+FT R++GDLE+ LDGRL+D+ + G++ Y+ G +P+S +RD
Sbjct: 58 ADPSCCARGTDLVFTWRKNGDLEIRLDGRLMDSFPDPDIGSGIFYEYLRGDDPMSVDARD 117
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S4N5V0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5V0_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.510e-7 Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 430 ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVGGN-PVSPPSRD 606
AD CC GTEL+FT R++GDLE+ +DGR++D + GL ++ Y+ G+ P+S +RD
Sbjct: 132 ADPGCCARGTELVFTWRKNGDLELRIDGRVMDIFKEPGLGRAIFYEYLRGDEPMSMDARD 191
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S0BW36_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BW36_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.560e-7 Identity = 28/61 (45.90%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 427 SADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVG-GNPVSPPSRD 606
+AD++CC GTEL+FT R++ DLEV LDGRL+DT + L++G++ Y +P+S +R+
Sbjct: 112 AADSSCCARGTELVFTWRKNLDLEVRLDGRLMDTFQDPALAKGIFFEYFREDDPMSVDARE 172
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: B7FXP3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXP3_PHATC) HSP 1 Score: 60.1 bits (144), Expect = 4.250e-7 Identity = 55/222 (24.77%), Postives = 90/222 (40.54%), Query Frame = 1
Query: 1 VWTEPETGLSFLRELPG----DGRGRPTQTLIGGGVYTKALMFKIYALAFYADVPRVLAAPELQAFRDAAAAXXXXXXXXXXXXXXXXXXXXASLMSAMARSSSFDRSISLRLSMAVSRDTAIA------------AMNSDFDLTPLEKRLL----------------VGTALKSADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNY 570
VWT+P TGL + +L G D + + TL+G G Y K ++ K+Y +A+Y VL++ + F AA + + +++L+ R++ A +NS P + L V ADA CC GTEL FT R++GDLEV L+ RL++T + +++ ++ Y
Sbjct: 330 VWTDPHTGLEYQTDLCGYLGHDRKEKGRHTLMGVGQYKKFVV-KVYGIAYYVSKRDVLSSNHV--FEPFAALSTAELRKRPDFYEHLRHMQSPESPDRGSFERTLMIKTNMQLAAETIRNSLHADWKMLTEEAKHLLINSSIQPRPANQETLALIQSPNNPSRCSCSQVAPPEYQADADCCARGTELAFTWRKNGDLEVRLNRRLMETFQRPDIAQAIFYEY 548
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Match: A0A7S1GNX8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNX8_CYCTE) HSP 1 Score: 56.6 bits (135), Expect = 5.080e-6 Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 430 ADATCCGAGTELLFTSRRSGDLEVYLDGRLVDTLRTDGLSEGLWRNYVG-GNPVSPPSRD 606
AD +CC GTEL FT R++GDLEV +D R++D +EG++ Y+ +P+SP R+
Sbjct: 39 ADKSCCARGTELAFTWRKNGDLEVRVDKRIMDIFPRPDAAEGIFFEYLRHDDPISPDFRE 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6527.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6527.2.1 >prot_P-wetherbeei_contig6527.2.1 ID=prot_P-wetherbeei_contig6527.2.1|Name=mRNA_P-wetherbeei_contig6527.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp VWTEPETGLSFLRELPGDGRGRPTQTLIGGGVYTKALMFKIYALAFYADVback to top mRNA from alignment at P-wetherbeei_contig6527:2733..3338- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6527.2.1 ID=mRNA_P-wetherbeei_contig6527.2.1|Name=mRNA_P-wetherbeei_contig6527.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig6527:2733..3338- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6527:2733..3338- >mRNA_P-wetherbeei_contig6527.2.1 ID=mRNA_P-wetherbeei_contig6527.2.1|Name=mRNA_P-wetherbeei_contig6527.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig6527:2733..3338- (Phaeothamnion wetherbeei SAG_119_79)back to top |