mRNA_P-wetherbeei_contig6519.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A6H5L3F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F4_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.050e-39 Identity = 115/265 (43.40%), Postives = 147/265 (55.47%), Query Frame = 3
Query: 219 AVIAASCYRVCGPW-RLGYSGGSQARARSSAGG---RRWMSAGAKPCERNPL-IDTSPESAAEGLRRAALFDPSASPPTAE-DLVCIQERQLAHKVDAFCVGQR-----CSHGFPQAFGYTPV-QKFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCRGPGSNAIGDLVLERLAADSIDVLGSDR 977
AV AA V G + R G+ G R R+S G R + + G+K P+ D ++A + R AL + P E DL CI+ERQL HK A C HGFPQAF + P K ++G+FRLSCPLLVQAID +E +GGI++VNARLA++ LR DF AVN AHG +R + +++E + E A+ L SGITG+ V DAKCLHAHVAD L RG +NAIG LE L A + G DR
Sbjct: 57 AVHAAGYLSVGGAFSRGGWRGRRSKRGRNSDDGDITRCFSTLGSKRQNSRPVGTDELTQTARD--RATALVEAYVPTPATEGDLRCIEERQLRHKAGASSRSMGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPEKLGMVEETIGK-----EGAERFLDSGITGVTTGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEARGVRTDGGDR 314
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A6S9FG26_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FG26_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.130e-36 Identity = 83/184 (45.11%), Postives = 115/184 (62.50%), Query Frame = 3
Query: 435 PTAEDLVCIQERQLAHKVDAFCVGQRCSHGFPQAFGYTPVQ-KFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEA-VGDAKCLHAHVADRLCRGPGSNAIGDLVLERLAA-DSIDVLGSDR 977
PT ED+ CI+ RQL H + F VGQRC +GFPQAFG+ PV+ K ++G+FRLSCPLLV+A+D+ E +GG+ E++ + E+ DFR N IR + P +++++ R G + A+ L SGI G+ A + D KCLHAH AD LCR G N IG VL+RL I+V G+D+
Sbjct: 65 PTPEDIDCIENRQLEHGANIFSVGQRCKYGFPQAFGFHPVEHKVSSGLFRLSCPLLVRAVDEWEAEGGVREMSDAARSSAEITDDFRETNQRISKIRRSIVES-FPGGMEKVQQRLG--KDNAERFLSSGIAGLGPNAGLSDVKCLHAHAADHLCRKDGGNIIGKEVLQRLEEKQGINVCGNDK 245
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: D8LLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL9_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.040e-35 Identity = 82/156 (52.56%), Postives = 99/156 (63.46%), Query Frame = 3
Query: 513 CSHGFPQAFGYTPV-QKFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCRGPGSNAIGDLVLERLAADSIDVLGSDR 977
C HGFPQAF + P K ++G+FRLSCPLLVQAID +E +GGI++VNARLA++ LR DF AVN AHG +R D L++E + E A L SGITG+ V DAKCLHAHVAD L RG +NAIG LE L A + G DR
Sbjct: 8 CRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPDKMGLVEETIGK-----EGAGRFLDSGITGVTPGKVRDAKCLHAHVADALMRGRSANAIGRATLELLEARGVRTDGGDR 158
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A7S2HF12_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF12_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.780e-35 Identity = 88/206 (42.72%), Postives = 121/206 (58.74%), Query Frame = 3
Query: 333 GAKPCERNPLIDTSPESAAEGLRRAALFDPSASPPTAEDLVCIQERQLAHKVDAFCVGQRCSHGFPQAFGYTPVQ-KFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEA-VGDAKCLHAHVADRLCRGPGSNAIGDLVLERLA 944
G+KP + +S S +G RR A D PT D+ CI+ RQL H + F VG+RC +GFPQAFG+ PV+ K ++G+FRLSCPLLV+AID+ E +GG+ E++ + E+ ADF N IR + P +++++ G + ++ L SGI G+ A + D KCLHAHVAD LCR G N IG VL RLA
Sbjct: 7 GSKPTR----LSSSSSSNNQGCRRFAGEDFDV--PTLSDINCIENRQLEHSANIFFVGKRCKYGFPQAFGFHPVEHKVSSGLFRLSCPLLVKAIDEWEGEGGVREMSDAARSSAEITADFEETNRRIAQIRRSIIDS-FPGGMEKVQMHLG--EDNSERYLSSGIAGLGLNAGLADVKCLHAHVADHLCRKDGGNRIGQEVLRRLA 203
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A7S0BWE2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWE2_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.970e-30 Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 3
Query: 435 PTAEDLVCIQERQLAHKVDAFCVGQRCSHGFPQAFGYTPVQ-KFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADL-PRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCR--GPGSNAIGDLVLERLAAD 950
PT D+ CI + Q+ H + AF +GQ+C+HG+PQA+G P + K + G+FRL+CP+LVQAID+ E GG+ E+N + +L F AVN +R+ + D P ++++ +R G A+ +L SGI G+ A D KCLHAHVAD+LCR S+ IG +L L +
Sbjct: 34 PTKSDIDCIHQHQIHHPIQAFSIGQKCTHGYPQAYGNHPCEYKISGGLFRLTCPMLVQAIDEWEARGGVRELNDLVMGSEDLTRSFHAVNQR--TVRVRKAVIDAHPGGMEKITSRLGDFN--AERLLASGIAGLGPNAGVDVKCLHAHVADQLCRPADDDSDTIGKEILRLLKVE 205
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: K8YZM2_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YZM2_NANGC) HSP 1 Score: 118 bits (295), Expect = 1.030e-25 Identity = 73/185 (39.46%), Postives = 99/185 (53.51%), Query Frame = 3
Query: 429 SPPTAEDLVCIQERQLAHKVDAFCVG---QRCSHGFPQAFGYTPVQK-FNTGIFRLSCPLLVQAIDKMERD----------------------GGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCRGPG 905
+P + ED+ CI++RQL H + C G QRC+HGFPQAF + P + FN+G+FRLSCPLLV+A+D+ E GG+ E N +L ++ +FR VNA H AIR G P L+ + G + + +L SGI G+ GD KCLHAH+AD LC G
Sbjct: 111 TPASDEDIACIEQRQLGHPIT--CAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQVALCFRVGSPIHPFPSLPSLPPGGLQEFNRKLEKSPAMQREFRRVNARHSAIR---RGLVDPEGLRSYVEKLGEAG--VEQILASGIAGVSPTKTGDLKCLHAHLADYLCTRTG 288
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A8J5XFE8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFE8_DIALT) HSP 1 Score: 113 bits (283), Expect = 1.230e-24 Identity = 77/190 (40.53%), Postives = 102/190 (53.68%), Query Frame = 3
Query: 429 SPPTAEDLVCIQERQLAHKVDAF-CVGQRCSHGFPQAFGYTPV--QKFNTG-------IFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCRGPGSNAIGDLVLERLAADSIDVLG 968
+P +AED+ CI+ERQL H + A VG+RC +GFPQA P+ +K+ G +FRL+CP LV+ ID+ E G + N LA E VNA H IR G+ R EL+A + +L SG+ G+ + GD KCLHA VAD LCRG NA+ D VL+ L A +D G
Sbjct: 75 TPASAEDVACIEERQLRHPISAMVAVGKRCKYGFPQALALDPLGREKYGLGGHPIDAALFRLTCPHLVKGIDEWEAQGAVRAFNEHLAASAEWTQSNDNVNAQHRQIRRALVGSAAKRA--ELEASPVHAI-----ILNSGLAGLTKQ--GDVKCLHAQVADGLCRG--DNAVADAVLDGLRARGVDPEG 253
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A7S2PD55_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD55_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.640e-24 Identity = 71/166 (42.77%), Postives = 90/166 (54.22%), Query Frame = 3
Query: 435 PTAEDLVCIQERQLAHKVD---AFCVGQRCSHGFPQAFGYTPVQ--KFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDF--ELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCRGPGSN 911
PT +DL IQERQ+ HK++ CV C HGFPQAFG+ P + K +G+FRLSCPLLVQ ID+ E G+ E+ L D + R + N IR E D +L+ + G AA V SGI GI + + KC+HAHVAD LCR SN
Sbjct: 103 PTEQDLQTIQERQVCHKLEPSQVTCVSSPCRHGFPQAFGFHPTKGPKLVSGLFRLSCPLLVQQIDEWEGQSGVREMTDWLRNDVNGDKRKGYERANEMQKQIRSELVAEDYDKLVSRM-----GEYNAAKFVE-SGIAGIPSSQTYNVKCIHAHVADHLCRSSQSN 262
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A813KBV7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KBV7_POLGL) HSP 1 Score: 102 bits (254), Expect = 6.430e-21 Identity = 65/165 (39.39%), Postives = 89/165 (53.94%), Query Frame = 3
Query: 504 GQRCSHGFPQAFGYTPVQKFNTG-------IFRLSCPLLVQAIDKMERDGGIDEVNARLATDFELRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGV-LGSGITGIRAEAVGDAKCLHAHVADRLCRGPGSNAIGDLVLERLAADSIDVLGSD 974
G+RC HG+PQA Y P+ + G RL+CPLLV AIDKME+ G ++ N RL D E +F +N AH +RL AD P ++ ++ +G E GV +G+G+ +R +A D KCLHA V D L RG G+N I + I V G+D
Sbjct: 85 GRRCRHGWPQAIVYDPLYRERPGKHFRLGDTTRLTCPLLVGAIDKMEKKGAMEAYNERLLRDPEWHGNFAEINEAHRLLRLSLV-ADRPEEMRSVRELYG---ETTFGVAMGAGLASMRPDAKADVKCLHAQVGDELIRG-GNNLIAQQTPRDIEEQGISVDGTD 244
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Match: A0A7S0L8X3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8X3_9EUKA) HSP 1 Score: 101 bits (252), Expect = 1.370e-20 Identity = 72/185 (38.92%), Postives = 97/185 (52.43%), Query Frame = 3
Query: 447 DLVCIQERQLAHKV-DAFCVGQRCSHGFPQAFGYTPVQ------KFNTGIFRLSCPLLVQAIDKMERDGGIDEVNARLATDFE--LRADFRAVNAAHGAIRLERTGADLPRLLKELKARFGGSAEAADGVLGSGITGIRAEAVGDAKCLHAHVADRLCRGPGSNAIGDLVLERLAADSIDVLGSD 974
D + + RQ + +A+ +G RC HG+PQAF + P+ + G+FRLSCPLLV+AID+ E +G + +NA + D LR+ NA H A R E G+ L LL A V SGI G ++ + KCLHA VAD LCR SNA+G VLE L A + V G +
Sbjct: 75 DELHVLHRQTGQNLSNAYALGPRCRHGYPQAFMWDPMPVERKAVPIDAGLFRLSCPLLVKAIDEWESEGAVATLNAEVEADQSGALRSQLTQANAGHAAARKEVLGSRLHALLSTASTSPQ-DLRLARMVADSGIAG-QSRGKPEVKCLHAQVADHLCRSR-SNAVGQRVLEGLQARGVLVDGDE 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6519.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6519.1.3 >prot_P-wetherbeei_contig6519.1.3 ID=prot_P-wetherbeei_contig6519.1.3|Name=mRNA_P-wetherbeei_contig6519.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp MLHQGVISAVIAASCYRVCGPWRLGYSGGSQARARSSAGGRRWMSAGAKPback to top mRNA from alignment at P-wetherbeei_contig6519:296..1997- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6519.1.3 ID=mRNA_P-wetherbeei_contig6519.1.3|Name=mRNA_P-wetherbeei_contig6519.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1702bp|location=Sequence derived from alignment at P-wetherbeei_contig6519:296..1997- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6519:296..1997- >mRNA_P-wetherbeei_contig6519.1.3 ID=mRNA_P-wetherbeei_contig6519.1.3|Name=mRNA_P-wetherbeei_contig6519.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig6519:296..1997- (Phaeothamnion wetherbeei SAG_119_79)back to top |