mRNA_P-wetherbeei_contig6508.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6508.1.1
Unique NamemRNA_P-wetherbeei_contig6508.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A6G0XI78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI78_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.910e-12
Identity = 47/106 (44.34%), Postives = 59/106 (55.66%), Query Frame = 1
Query:    1 NVDARSPTTGRAALHESAVRGDNASAALLLK-AGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTSPLVVKLLITRGASV 315
            +V+ARS  TGRA LHE+ +RG       LL      + +RT LG  TPLHLAA A     G R +A LL+ HGA+  A +R+G T LHY T   V   L   GA +
Sbjct:   27 DVNARSAITGRAILHEACIRGKKDIVQYLLNHTTCDLEVRTMLGHATPLHLAAQA-----GERSIAFLLLSHGANATARDRFGATPLHYCTKRSVAVHLTQFGAKI 127          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A485KWF4_9STRA (Aste57867_12768 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWF4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 9.170e-12
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1
Query:    1 NVDARSPTTGRAALHESAVRGD-NASAALLLKAGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTT 270
            +V+ RSP +GRA LHE+ +RG  +    LL +    + +RT LG  TPLHLA+ A     G R +A LL+ HGA+  A +R+G T LHY T
Sbjct:   22 DVNVRSPESGRAVLHEACMRGKKDVVEYLLARTDCDIEIRTMLGHATPLHLASQA-----GERSIAFLLLSHGANATARDRFGSTPLHYCT 107          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A7S3Y6Y1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6Y1_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 9.630e-11
Identity = 45/103 (43.69%), Postives = 56/103 (54.37%), Query Frame = 1
Query:    4 VDARSPTTGRAALHESAVRGDNASAALLLKA-GASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTSPLVVKLLITRGA 309
            +D RS T GR  LHE+ V G       L++  GA V   TFLG DTPLHLAA       G R V   L+QHGAD +  N+YG T + YT +  +   L+  GA
Sbjct:   43 IDMRSTTDGRNILHEACVAGHLQLVLKLVREFGADVNHETFLGKDTPLHLAA-----MHGRRAVCVHLLQHGADPNYRNKYGSTPIFYTRNLTIAIQLVKYGA 140          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A5D6Y2P5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2P5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.830e-10
Identity = 48/105 (45.71%), Postives = 58/105 (55.24%), Query Frame = 1
Query:    4 VDARSPTTGRAALHESAVRGDNASAALLL-KAGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTSPLVVKLLITRGASV 315
            V+ARSPT+GRA LH++   G    A LLL K  A + LRT LG  TPLHLA          R V  LL+ +GAD    +R G + +HY  S  V KLLI  G  V
Sbjct:   53 VNARSPTSGRALLHDACAEGHLEIAKLLLEKTDADIMLRTMLGRCTPLHLAVT-----NNHRPVVFLLLSYGADPLCRDRSGSSPMHYVKSISVAKLLIQYGGLV 152          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A7S2PDT2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDT2_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.200e-9
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 1
Query:    4 VDARSPTTGRAALHESAVRG-DNASAALLLKAGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTS 273
            VDAR  T+GR  LHE+A  G D+   +L+ +  A +  +T+LGGDTPLHLA ++      ++   +LL+++GAD +  NRY  T LHY  S
Sbjct:   28 VDARDATSGRYLLHEAAAYGNDSLIDSLVTEFAADLHQKTYLGGDTPLHLAVSS-----DSKSTVSLLLRYGADPNVQNRYMCTPLHYACS 113          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A5J5F949_9PEZI (Ankyrin repeat-containing domain protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5F949_9PEZI)

HSP 1 Score: 55.8 bits (133), Expect = 7.590e-7
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 1
Query:   19 PTTGRAALHESAVRGDNASAA----LLLKAGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTS 273
            P  G  ALH  + R D ++A     +LL+AGASV  R  + G+ PLH    +AV    ++++ ALL++ GAD++AT+  GQTALH+  S
Sbjct:  107 PGFGPTALHSCSWRNDASTAVEVARVLLEAGASVNARAPISGERPLH----SAVIGNQSKELVALLLERGADVNATDNTGQTALHHCVS 191          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: UPI000D72D757 (ankyrin repeat and KH domain-containing protein mask-like isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D72D757)

HSP 1 Score: 55.5 bits (132), Expect = 1.060e-6
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 1
Query:   22 TTGRAALHESAVRGDNASAALLLKAGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTAL 258
            TTGR  +H +A+  + A+   LL AG  V  R  + GDTPLH+A A         DV A+LVQHGAD++A N  G+T L
Sbjct:  209 TTGRRPVHCAALSSNIAALKRLLDAGCDVSARDSIMGDTPLHVACARCC-----DDVIAVLVQHGADVNAANHAGETPL 282          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A2T7NMQ6_POMCA (MYND-type domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NMQ6_POMCA)

HSP 1 Score: 55.5 bits (132), Expect = 1.140e-6
Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 1
Query:   22 TTGRAALHESAVRGDNASAALLLKAGASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTAL 258
            TTGR  +H +A+  + A+   LL AG  V  R  + GDTPLH+A A         DV A+LVQHGAD++A N  G+T L
Sbjct:  865 TTGRRPVHCAALSSNIAALKRLLDAGCDVSARDSIMGDTPLHVACARCC-----DDVIAVLVQHGADVNAANHAGETPL 938          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A4Q2YRT3_9BACT (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YRT3_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 3.330e-5
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   52 AVRGDNASAALLLKAGASVGLRTFLGGDTP-LHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTSPLVVKLLITRGA 309
            A+R + A    LLKAGA V   T     TP LHLAA+      G  DVAA L++ GAD+ A ++ G+TAL + ++P +V  LI++GA
Sbjct:   23 ALRSNAAMVPALLKAGADVNSPTDRRLFTPPLHLAAST-----GKPDVAAQLIEVGADVKAVDKNGETALFFASTPEMVDFLISKGA 104          
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Match: A0A443SJX5_9ACAR (Ion channel nompc-like protein n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SJX5_9ACAR)

HSP 1 Score: 51.2 bits (121), Expect = 3.580e-5
Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 1
Query:  100 ASVGLRTFLGGDTPLHLAAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYT 267
            A+V L+    G+TPLH+AA      P  +D   LL++ GAD+DAT   G+TALHYT
Sbjct:  695 ANVSLKAGRSGETPLHIAAKI----PDGKDCTELLIKSGADIDATQENGETALHYT 746          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6508.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6G0XI78_9STRA4.910e-1244.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KWF4_9STRA9.170e-1245.05Aste57867_12768 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S3Y6Y1_HETAK9.630e-1143.69Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5D6Y2P5_9STRA1.830e-1045.71Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S2PDT2_9STRA2.200e-942.86Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A5J5F949_9PEZI7.590e-741.57Ankyrin repeat-containing domain protein n=1 Tax=S... [more]
UPI000D72D7571.060e-645.57ankyrin repeat and KH domain-containing protein ma... [more]
A0A2T7NMQ6_POMCA1.140e-645.57MYND-type domain-containing protein n=2 Tax=Pomace... [more]
A0A4Q2YRT3_9BACT3.330e-543.68Ankyrin repeat domain-containing protein (Fragment... [more]
A0A443SJX5_9ACAR3.580e-548.21Ion channel nompc-like protein n=1 Tax=Leptotrombi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6508contigP-wetherbeei_contig6508:93..650 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4787.PITG_13894T0
PFAMsAnk_2
Model size315
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.13e-15
EggNOG OGsCOG0666@1|root,KOG0504@2759|Eukaryota,3QGBK@4776|Peronosporales
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-12_001280.1
DescriptionAnkyrin repeat
Cds size315
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.7559683-CDS-P-wetherbeei_contig6508:92..3311683186918.7559683-CDS-P-wetherbeei_contig6508:92..331Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6508 93..331 +
1683186918.7663662-CDS-P-wetherbeei_contig6508:574..6501683186918.7663662-CDS-P-wetherbeei_contig6508:574..650Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6508 575..650 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6508.1.1prot_P-wetherbeei_contig6508.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6508 93..650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6508.1.1

>prot_P-wetherbeei_contig6508.1.1 ID=prot_P-wetherbeei_contig6508.1.1|Name=mRNA_P-wetherbeei_contig6508.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp
NVDARSPTTGRAALHESAVRGDNASAALLLKAGASVGLRTFLGGDTPLHL
AAAAAVARPGARDVAALLVQHGADLDATNRYGQTALHYTTSPLVVKLLIT
RGASV
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mRNA from alignment at P-wetherbeei_contig6508:93..650+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6508.1.1 ID=mRNA_P-wetherbeei_contig6508.1.1|Name=mRNA_P-wetherbeei_contig6508.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=558bp|location=Sequence derived from alignment at P-wetherbeei_contig6508:93..650+ (Phaeothamnion wetherbeei SAG_119_79)
AACGTCGATGCCCGCAGCCCGACAACGGGCCGCGCGGCGCTCCACGAATC CGCCGTTCGCGGGGACAACGCGAGCGCCGCCCTCCTGCTCAAGGCTGGCG CTTCTGTCGGTCTCAGAACCTTTCTTGGCGGGGATACTCCATTGCACCTG GCAGCTGCCGCGGCCGTTGCCCGGCCCGGTGCGCGTGACGTTGCGGCCCT GCTCGTACAGCACGGCGCCGACCTCGACGCGACGAATCGGTGCGTCTTTG CAGTAAACCTAGAGCACTATGCTCGTCGTGCCGGGAAAAGATTGTACGTC TTTTGCCATGCATCACCACTTCTACGCCACTCTACTCTTCAAGAACCGTA CTTCGCACAACCGGGCTATACAATCCTACGAAAAAGTTGCATCCTTTTCC AAGAACACTGCTATGTCCTTCTGCTCTTGATCCCTTTTTGCGGGCCGCTA ACCCTCCTTGTGACTGAAATCGCTCGTCGCAGTTACGGACAGACGGCGCT TCACTACACCACCAGTCCGCTCGTCGTCAAGCTGCTTATCACTCGCGGCG CGTCGGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6508:93..650+

>mRNA_P-wetherbeei_contig6508.1.1 ID=mRNA_P-wetherbeei_contig6508.1.1|Name=mRNA_P-wetherbeei_contig6508.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig6508:93..650+ (Phaeothamnion wetherbeei SAG_119_79)
AACGTCGATGCCCGCAGCCCGACAACGGGCCGCGCGGCGCTCCACGAATC
CGCCGTTCGCGGGGACAACGCGAGCGCCGCCCTCCTGCTCAAGGCTGGCG
CTTCTGTCGGTCTCAGAACCTTTCTTGGCGGGGATACTCCATTGCACCTG
GCAGCTGCCGCGGCCGTTGCCCGGCCCGGTGCGCGTGACGTTGCGGCCCT
GCTCGTACAGCACGGCGCCGACCTCGACGCGACGAATCGTTACGGACAGA
CGGCGCTTCACTACACCACCAGTCCGCTCGTCGTCAAGCTGCTTATCACT
CGCGGCGCGTCGGTC
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