mRNA_P-wetherbeei_contig6505.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6505.1.1
Unique NamemRNA_P-wetherbeei_contig6505.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A6H5JMA2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA2_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 9.750e-81
Identity = 163/369 (44.17%), Postives = 224/369 (60.70%), Query Frame = 1
Query:  772 EELLDAATLRAKAIAIIQQRIAAQDVTVRAATAEAVRALPADQRAALDELRRFAFGGDDDGSGGXXSTXXXXXXXXXXXXXXLTASERAALETVVICGDTDQMLLAFLRPVHFDMARAADTLRRCCTLRIERRLDALFAPGRRVAADKTWHHRRCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHA--SPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGGPTEADVGHRDPMWCEIDAVMAVFGDGGDPFVTEEEIDIVTAELRRE 1872
            EE L+AA +R     I+  R +AQD  V+ A A AV ALP  QR   ++++ FAFGG ++G  G                  L+  E  AL TV ICGD D ++LAFLR   FD+ +A +++RRCC  R E   D LF   R V+  K   +R  WPTGF   D  G PVF+DR+GQ+D+  L      +D +E+V ++ QNMEVRRR+VLTR SRE GRPV QM TVLDL G+G+ H   +  A+ YTR I ++F+  Y+ M     I+N PWVFS+ W VVE FL E+T+ K+++LG G A L +L+ Y+P E IP FLGG + A +G  DP+W ++D  + ++GD GDPF+   E+  V+  + RE
Sbjct:  303 EEELEAAAIRE----ILGLR-SAQDRKVQVAAARAVEALPPTQRECFEDVKAFAFGGANEGKEGAG----------------LSEEEVEALNTVAICGDRDGVVLAFLRHSKFDVRKAKESMRRCCAWRKENEADDLFK--RAVSPAKMKKYRTHWPTGFHKQDRAGRPVFYDRVGQSDLSKLREDPDGLDQDEMVQIFTQNMEVRRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDVFQDNYSGMTSSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLKQLEEYIPKENIPEFLGGESRAVIGPSDPLWSDVDRAVRLWGDDGDPFLDPSEVKRVSRRIARE 648          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A836C941_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C941_9STRA)

HSP 1 Score: 224 bits (571), Expect = 4.530e-59
Identity = 147/340 (43.24%), Postives = 183/340 (53.82%), Query Frame = 1
Query:  838 AQDVTVRAATAEAVRALPADQRAALDELRRFAFGGDDDGSGGXXSTXXXXXXXXXXXXXXLTASERAALETVVICGDTDQMLLAFLRPVHFDMARAADTLRRCCTLRIERRLDALFAPGRRVAADKTWHHRRCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTR-----------------TIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPA---ALTKLQSYVPAEVIPTFLGGPTEADVGHRDPMWCEIDAVMA 1797
            A+D  VRA TA  V ALP+ +RAALD LR FA+GG           XXXXXXXXX     L + +  AL  VV+CGDTD MLL+FLRP  +D+ +A D +R     R +   +A+FA  RR    K   HRR WPT F G D +G PV +DR+G ADV A+ R    + L+E+V +Y  NMEVRRR +L   SR  GRPV Q VTVLDL+G+G  H S  A  Y R                  +G IF   Y DMV   YI+N PW F+  W   +  L   TL               L+ L+  +  E IP  LGG + A +G  +PMW EIDA MA
Sbjct:  153 ARDAEVRAGTAALVAALPSQRRAALDALREFAYGG---------XXXXXXXXXXXSAERCLPSEDLEALAAVVMCGDTDGMLLSFLRPSKYDLEKAKDLMRAAARWRRDNAANAMFA--RRPPPHKLARHRRHWPTSFHGLDREGRPVLYDRIGSADVGAMLRDPGGLTLDEVVLIYCLNMEVRRRLILPEMSRAHGRPVTQFVTVLDLKGIGARHLSVAARAYIRGRIXXXXXXXXXXXXMAAVGAIFDVNYRDMVARLYIVNAPWAFAAAWRAAQAVLSAHTLEXXXXXXXXXXXIQVLSNLEDVIAPEHIPRELGGLSPAAIGPDNPMWLEIDAAMA 481          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: D7FPB8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB8_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 7.970e-39
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 1378 MEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHA--SPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGGPTEADVGHRDPMWCEIDAVMAVFGDGGDPFVTEEEIDIVTAELRRE 1872
            M+VRRR+VLTR SRE GRPV QM TVLDL G+G+ H   +  A+ YTR I +IF+  Y+ M     I+N PWVFS+ W VVE FL E+T+ K+++LG G A L +L+ Y+P E IP FLGG + A +G  DP+W + D  + ++GD GDPF+   E+  V+  +  E
Sbjct:  468 MQVRRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDIFQDNYSGMTCSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLQQLEEYIPKENIPEFLGGESRAVIGPSDPLWSDFDRAVRLWGDDGDPFLDPSEVKRVSRRIAGE 634          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A7R9UEP8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEP8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.580e-27
Identity = 90/305 (29.51%), Postives = 147/305 (48.20%), Query Frame = 1
Query:  838 AQDVTVRAATAEAVRALPADQRAALDELRRFAFGGDDDGSGGXXSTXXXXXXXXXXXXXXLTASERAALETVVICGDTDQMLLAFLRPVHFDMARAADTLRRCCTLRIERRLDALFAPGRRVAADKTWHHRRCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADM-VKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGGPTEAD 1749
            A+D  V  +T   V  LP  +R AL+ELR      D D + G  S                  +E   L+   ICGD D  L+ +L    ++++ A   L+      +  R   L      V+ +K   +   WP  F G D  G P+F +  GQ    A+ R   A+ ++E+++LY+++MEV+RR++  R SRE GR + +M T+ DL+G+G+A ASP  + + + + ++    Y      G Y ++ PWVF+R++G+V+G L ++      +L        +L   V AE +P  L G    D
Sbjct:   81 ARDARVLESTRMEVERLPPSKRTALEELRTRV---DADAAAGAISR-----------------AELDVLKQWSICGDRDGTLMWYLEAGRWELSSAYQGLKDSLQWAVTER-PRLLQLAADVSPEKRALYFSSWPVDFLGLDRKGEPIFLEYTGQIKAGAMSR---AMSMDEMISLYVESMEVKRRYLFPRFSREAGRRIDRMGTICDLRGLGMAQASPACVSFIKQMAKVHALGYGGAHTGGIYFVHAPWVFNRLFGMVKGALSQQMQDSCNVLSRSE----ELLQLVDAEYLPGDLAGDAPKD 357          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A7S1U781_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U781_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.200e-23
Identity = 93/307 (30.29%), Postives = 142/307 (46.25%), Query Frame = 1
Query:  838 AQDVTVRAATAEAVRALPADQRAALDELRRFAFGGDDDGSGGXXSTXXXXXXXXXXXXXXLTASERAALETVVICGDTDQMLLAFLRPVH--FDMARAADTLRRCCTLRIERRLDAL-FAPGRRVAADKTWHHRRCWPTGFFGADA-DGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADM-VKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGGPTE 1743
            A D+ V  +T   V ALPA+QR AL  LR                               L+  ER  L+   ICGD D  L+ +L      +D   A + L+         R++ L  A G  ++A++   +   WP  F G D  D  P+F +R GQ    A+ R   ++ LEE++ LY+++MEV+RR++  R SRE G  V +M  V DL+G+GLA ASP+ + Y + +       YA     G   I  PW F +++  ++  + ++     ++L        +LQ  +P   IPT LGG  E
Sbjct:    8 AADLRVLESTKAEVAALPAEQREALAALRAKVL-----------------------EAGALSPEERQCLQEWSICGDVDGALIWYLEAAKKKWDAELAFEVLKESLVWGTTERVNYLRVAKG--LSAEQRVVYAESWPQEFLGVDENDRQPIFLERTGQIKAGAMSR---SMTLEEMIALYVESMEVKRRYLFPRLSREAGFRVDRMKMVCDLRGLGLAQASPSCLNYIKKMVATHALGYASAHTGGVNFIYAPWAFFKLFNAIKSTMSQDMQDSCKVLKDP----VQLQEELPRANIPTELGGDLE 282          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A3P3YEY5_PLABS (CRAL-TRIO domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YEY5_PLABS)

HSP 1 Score: 112 bits (280), Expect = 1.830e-23
Identity = 60/169 (35.50%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 1228 RRCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGG 1734
            +  +P GF   D  G P++ +R+GQ D++AL       + +EL  L++Q+ME  R  +    S   GRPV Q VT+LD+ G+ ++HAS     Y +   EI ++ Y +++   +I+N P VFS VW +++ +L E+T  KI I     A    +   V A+V+P FLGG
Sbjct:   92 KEVYPHGFHKFDKSGHPIYIERIGQLDIKALME---ITNSDELCRLHVQSMEYSRSTLFPEASARAGRPVSQQVTILDMDGLSMSHASSAVYAYIKGCAEIDQSYYPEILSRMFIVNAPAVFSVVWKMIKPWLDEKTQSKISISRKSDAE--SILELVEADVLPEFLGG 255          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A383W0R8_TETOB (CRAL-TRIO domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W0R8_TETOB)

HSP 1 Score: 103 bits (257), Expect = 3.070e-20
Identity = 74/252 (29.37%), Postives = 122/252 (48.41%), Query Frame = 1
Query: 1033 RAALETVVICGDTDQM-LLAFLRPVHFDMARAADTLRRCCTLRIERRLDALFAPGRRVAADKTWHH-----RRCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMG-LAHASPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGGPTEADVGHRDP 1767
            R  L  +++ G  D++ LL FL+  H+++A+AA   +   T R E  +D L         D+   H     R+ +P  +   D  G PV+ + +GQ D+  L +      +E     ++Q  E  R   L   +   GR ++    +LD+ G+    H + T   +   I  I +  + + +   ++INTP +F   W V++GFL E TL KI++LGSG   L +L + +PAE +PT LGG +  D     P
Sbjct:   28 RQTLGALLVPGLDDRVSLLRFLKARHWNVAKAAKMYQAMATWRTEHEVDQLL--------DRFEFHELPLVRKHYPHFYHKTDKYGRPVYIELLGQCDIDQLLK---VTTIERFTNYHIQQSEAFRCHKLPACTAAAGRTMLTHTIILDMAGLSPTRHFTLTVKHFLENISRIDQNNFPEHLGCLFMINTPLLFRGFWSVIKGFLDERTLAKIKVLGSG--YLPELLAVIPAENLPTMLGGKSACDCTDLGP 266          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A4P7NJQ8_MAGOR (CRAL-TRIO domain-containing protein n=6 Tax=Pyricularia TaxID=48558 RepID=A0A4P7NJQ8_MAGOR)

HSP 1 Score: 100 bits (249), Expect = 3.870e-19
Identity = 80/257 (31.13%), Postives = 125/257 (48.64%), Query Frame = 1
Query: 1018 LTASERAALETVVIC----GDTDQM----LLAFLRPVHFDMARAADTLRRCCTLRIERRLDALFAPGRRVAADKTWHHR------RCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRR----SRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGG 1734
            LTA ++A +  + +     G TD++    LL FLR   FD+  A      C   R E +LD +           TW +       + +P  +   D DG PV+ +++G AD+ A+ +       E ++T    N+ V    V   R    SR+ G  +    T++D +G+G++ AS     Y R    + +  Y + +   Y+INTPW FS VWG+V+G+L   T+ KI ILGSG     +L + +PAE +P  LGG
Sbjct:   36 LTAEQQAQVSQLRLMLESQGYTDRLDTLTLLRFLRARKFDVNLALKMFVDCEKWRKETKLDEILP---------TWDYPEKAEIFKYYPQYYHKTDKDGRPVYIEQLGNADITAMNK---ITTQERMLT----NLAVEYERVADPRLPACSRKSGHLLETCCTIMDFKGVGISKASQV-YGYVRAASNMSQNYYPERLGRLYLINTPWGFSGVWGIVKGWLDPVTVQKIHILGSGYQK--ELLAQIPAENLPKSLGG 273          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A409YBW1_9AGAR (CRAL-TRIO domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409YBW1_9AGAR)

HSP 1 Score: 99.4 bits (246), Expect = 3.890e-19
Identity = 80/233 (34.33%), Postives = 112/233 (48.07%), Query Frame = 1
Query: 1072 DQMLLAFLRPVHFDMARAADTLRRCCTLRIERRLDAL---FAPGRRVAADKTWHHRRCWPTGFFGADADGSPVFHDRMGQADVRAL-GRGDAAVDLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILG-SGPAALTKLQSYVPAEVIPTFLGGPTEADVG 1755
            D MLL FLR   FD+A+  + L      R E  +D +   F    +V  DK +      P  +   D DG PV+ +R+G+ D++AL         L+ LV  Y + +  R    L   S+  G PV    T+LDL G+GLA+       Y      I +  Y + +  FYIIN PW F+ VW V++ +L E T+ KI ILG S   AL K    +PA+ +P   GG  E   G
Sbjct:   60 DAMLLRFLRARKFDLAKTKEMLLNAEKWRKEFGVDDIVKNFDFKEKVEVDKYY------PQYYHKTDVDGRPVYIERLGKLDIKALYSITTQERQLQRLVLEYEKFLNER----LPACSKACGHPVETSCTILDLGGVGLANFYRVK-DYVMAASSIGQDRYPETMGKFYIINAPWAFTTVWMVIKPWLDEVTVRKIEILGGSYKDALLK---QIPAQSLPKEFGGSCECQGG 278          
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Match: A0A066WAG1_9AGAM (CRAL-TRIO domain-containing protein (Fragment) n=4 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A066WAG1_9AGAM)

HSP 1 Score: 99.4 bits (246), Expect = 5.120e-19
Identity = 75/225 (33.33%), Postives = 111/225 (49.33%), Query Frame = 1
Query: 1072 DQMLLAFLRPVHFDMARAADTLRRCCTLRIERRLDALFAP---GRRVAADKTWHHRRCWPTGFFGADADGSPVFHDRMGQADVRALGRGDAAV-DLEELVTLYMQNMEVRRRWVLTRRSRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADMVKGFYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEVIPTFLGG 1734
            D  LL FLR   FD+ ++ + +  C   R +  +D + A      +   DK +      P  +   D DG PV+ +R+G  DV+AL +       L+ LV  Y + +  R    L   S   G+P+    T+LDL+G+GL  +  +   Y      I +  Y + +  FYIIN P++FS VWG V+ +L E T+ KI ILGS      KL   +PAE +P  LGG
Sbjct:   47 DPTLLRFLRARKFDLPKSKEMIIACEEWRKKFGVDDIVANFDFPEKAEVDKYY------PQFYHKMDKDGRPVYIERLGTVDVKALAKITTQERQLQNLVLQYERFLHER----LPACSAAAGQPIETSCTILDLKGVGLG-SFYSVKDYVMQASAIGQNYYPETMGKFYIINAPYLFSTVWGFVKPWLDEVTVAKIAILGSSEYK-AKLLEQIPAENLPADLGG 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6505.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMA2_9PHAE9.750e-8144.17CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A836C941_9STRA4.530e-5943.24CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
D7FPB8_ECTSI7.970e-3948.50CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A7R9UEP8_9STRA1.580e-2729.51Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U781_9STRA1.200e-2330.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A3P3YEY5_PLABS1.830e-2335.50CRAL-TRIO domain-containing protein n=2 Tax=Plasmo... [more]
A0A383W0R8_TETOB3.070e-2029.37CRAL-TRIO domain-containing protein n=1 Tax=Tetrad... [more]
A0A4P7NJQ8_MAGOR3.870e-1931.13CRAL-TRIO domain-containing protein n=6 Tax=Pyricu... [more]
A0A409YBW1_9AGAR3.890e-1934.33CRAL-TRIO domain-containing protein n=1 Tax=Panaeo... [more]
A0A066WAG1_9AGAM5.120e-1933.33CRAL-TRIO domain-containing protein (Fragment) n=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6505contigP-wetherbeei_contig6505:149..3062 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPB8
PFAMsCAP_GLY,CRAL_TRIO
Model size2654
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons2
Evalue5.95e-61
EggNOG OGsKOG1471@1|root,KOG1471@2759|Eukaryota
Descriptionmacromolecule localization
Cds size2571
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.6475854-UTR-P-wetherbeei_contig6505:148..2111683186918.6475854-UTR-P-wetherbeei_contig6505:148..211Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6505 149..211 +
1683186918.6816108-UTR-P-wetherbeei_contig6505:3042..30621683186918.6816108-UTR-P-wetherbeei_contig6505:3042..3062Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6505 3043..3062 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.6596541-CDS-P-wetherbeei_contig6505:211..15941683186918.6596541-CDS-P-wetherbeei_contig6505:211..1594Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6505 212..1594 +
1683186918.6705737-CDS-P-wetherbeei_contig6505:1854..30421683186918.6705737-CDS-P-wetherbeei_contig6505:1854..3042Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6505 1855..3042 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6505.1.1prot_P-wetherbeei_contig6505.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6505 212..3042 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6505.1.1

>prot_P-wetherbeei_contig6505.1.1 ID=prot_P-wetherbeei_contig6505.1.1|Name=mRNA_P-wetherbeei_contig6505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=857bp
MKLTRPRRVSPFLLLLIVHKMPAVAHFSAVHAGMAHRRLRTTKELTEAVA
ALETRAERIEAELTKLRTLSAAGSEDEVRNARPVGPKDAAEDEFEPTMRK
CLARLRSGVGEDLELRLRALIGLADAAPAEAGEGEGAGKDAAVQQRDDWV
TACARCLSRGLEDGSLRLRLAASADHFERQLGGAGQPNRKEGPAASTAAE
LPRAPTYDKPSSSPAEGTLAPQPPLSPSLDSGSVDAEELLDAATLRAKAI
AIIQQRIAAQDVTVRAATAEAVRALPADQRAALDELRRFAFGGDDDGSGG
GGSTGGLGGGHGGGLGAGLTASERAALETVVICGDTDQMLLAFLRPVHFD
MARAADTLRRCCTLRIERRLDALFAPGRRVAADKTWHHRRCWPTGFFGAD
ADGSPVFHDRMGQADVRALGRGDAAVDLEELVTLYMQNMEVRRRWVLTRR
SRELGRPVVQMVTVLDLQGMGLAHASPTAIRYTRTIGEIFKTMYADMVKG
FYIINTPWVFSRVWGVVEGFLGEETLGKIRILGSGPAALTKLQSYVPAEV
IPTFLGGPTEADVGHRDPMWCEIDAVMAVFGDGGDPFVTEEEIDIVTAEL
RREEQRRQRRRQRQQSSAEGAGAPSATTAMTGAAPEQAMADVAALAVSTR
STEASKAGASAPAVVAKGAASTPPGGGCSEAEAKPKKDLSSSDESSGGDG
EGERVVDDKDDEEGSYDDGIYDAPSDDIDSLPGGIESEEDDEDDSAPSVR
VRRRLRECPAAARPPTVSELVAKALSGLRLLAATAAAMVRAAVALLTAVA
KQAHSLLASAVSEEGEYDEEDEDSEAFVHAMMRHMRVGTLLQRVCGITGR
SLWIVQ*
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mRNA from alignment at P-wetherbeei_contig6505:149..3062+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6505.1.1 ID=mRNA_P-wetherbeei_contig6505.1.1|Name=mRNA_P-wetherbeei_contig6505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2914bp|location=Sequence derived from alignment at P-wetherbeei_contig6505:149..3062+ (Phaeothamnion wetherbeei SAG_119_79)
CATTTTTCAAAGTTGGTACTTAGTGGCCGTAGTCTCGAGACCTTTGAAAA GGTATTTGAAATAATGAAGTTGACGAGACCGCGGAGGGTATCTCCTTTCC TTCTCTTGCTTATAGTGCACAAGATGCCAGCTGTAGCACACTTCAGCGCC GTCCACGCTGGGATGGCTCACCGCCGCTTAAGGACGACAAAAGAGCTCAC CGAAGCTGTAGCAGCTTTAGAGACACGAGCCGAGCGAATTGAAGCTGAGC TCACAAAGCTGCGGACCCTATCAGCCGCGGGAAGCGAAGACGAAGTAAGA AATGCCAGGCCAGTCGGTCCTAAGGACGCAGCCGAGGACGAATTCGAACC GACCATGAGGAAATGCTTGGCACGATTACGAAGCGGCGTTGGCGAGGACT TGGAGCTACGACTACGAGCGCTCATCGGCCTTGCTGACGCTGCTCCTGCA GAGGCCGGCGAGGGGGAGGGCGCTGGAAAGGATGCCGCGGTGCAGCAGCG CGACGACTGGGTGACTGCGTGCGCGCGATGCTTGTCGCGGGGGTTGGAAG ACGGCTCGCTACGGCTCCGCCTGGCGGCCTCGGCTGATCACTTTGAGCGT CAGCTGGGCGGCGCCGGGCAGCCGAACCGGAAGGAAGGGCCTGCGGCGTC GACAGCGGCAGAGTTACCCCGTGCACCAACTTATGACAAGCCATCCTCTT CGCCGGCAGAGGGCACGCTAGCGCCACAGCCGCCGCTGTCGCCCTCTTTG GATTCGGGTTCAGTTGACGCCGAGGAGCTTTTGGACGCAGCGACGCTGCG GGCGAAAGCGATTGCTATTATCCAGCAACGAATAGCAGCACAGGACGTGA CGGTGCGAGCCGCCACGGCAGAAGCCGTGCGCGCTTTGCCGGCGGACCAG CGGGCAGCCCTCGACGAGCTCCGCCGCTTCGCGTTCGGCGGCGACGACGA TGGCAGTGGGGGTGGTGGCAGCACTGGTGGCCTCGGCGGAGGCCACGGCG GTGGCCTCGGCGCCGGCCTCACGGCCAGCGAGCGCGCGGCGCTGGAGACC GTGGTCATCTGCGGCGACACGGACCAGATGCTGCTAGCGTTCCTGCGACC CGTCCACTTCGACATGGCACGCGCCGCCGACACGCTGCGGCGGTGCTGCA CCCTCCGGATTGAGCGCCGCCTCGATGCGCTCTTCGCGCCGGGCCGTCGC GTCGCCGCCGACAAGACGTGGCACCACCGTCGCTGCTGGCCGACGGGCTT CTTTGGCGCCGACGCCGACGGCAGCCCCGTCTTCCATGACCGCATGGGCC AGGCGGACGTGCGGGCGCTGGGGCGGGGTGATGCGGCGGTGGACCTAGAG GAGCTCGTGACGCTGTACATGCAGAACATGGAGGTGCGACGCCGCTGGGT GCTGACGCGCCGCTCCCGGGAGCTCGGCCGCCCAGTGGTGCAGATGGTGA GTGGTGAAATAGCCAGATTTTCCAGTTCTCTTTTTCCGTGACGCTGTACA GTCCAGCGCACTGCGGCGGCGTGTGAGCAGCGCACCCGCTTGTATATTTT TTTTCAGCTACGGAAGGCTATGTTTTTTCGTACCCTTTAGTAGTTCACAG CTGGAAGCTTCTCTTCCTGCGCGAGTGCATGGGCTTGCAGCCAGCACACT TGACGCTGAAGCATTTCCGCCCCCGTCACTTCCATTGGTTGTTCCTCTCG TCTCAGGTGACCGTCCTGGACCTGCAAGGGATGGGCCTGGCGCACGCCAG CCCGACCGCCATCCGCTATACGCGGACCATCGGCGAAATCTTCAAGACGA TGTACGCTGACATGGTGAAAGGGTTCTACATCATCAACACGCCGTGGGTC TTTTCCCGCGTCTGGGGCGTCGTGGAGGGCTTCCTCGGCGAGGAAACCCT TGGCAAAATTCGCATCCTTGGCTCGGGGCCGGCGGCGTTGACGAAGCTGC AGAGCTACGTGCCGGCGGAGGTGATTCCCACATTCCTCGGGGGGCCCACC GAGGCCGACGTCGGCCACCGGGACCCGATGTGGTGTGAAATCGACGCGGT GATGGCGGTGTTCGGTGACGGCGGCGACCCGTTTGTGACGGAGGAGGAGA TTGACATAGTCACGGCGGAGCTACGACGCGAGGAGCAGCGCCGACAGCGG CGGCGGCAACGGCAACAATCGTCGGCGGAAGGGGCCGGAGCGCCGTCGGC GACGACGGCGATGACGGGAGCGGCGCCCGAACAGGCGATGGCGGATGTGG CCGCGTTGGCAGTGTCCACCAGGTCAACTGAAGCCTCGAAGGCTGGGGCC TCCGCACCGGCCGTTGTAGCAAAAGGCGCCGCGTCCACTCCGCCCGGTGG AGGATGCAGCGAAGCGGAAGCGAAGCCGAAGAAGGATCTTTCCAGCAGCG ATGAAAGCAGCGGCGGCGATGGAGAAGGGGAACGCGTCGTTGATGACAAA GACGATGAGGAAGGGTCTTACGACGACGGCATCTACGACGCTCCAAGCGA TGACATCGACTCTTTGCCAGGCGGCATCGAGAGCGAAGAGGATGACGAGG ACGATTCGGCTCCGTCAGTTCGAGTCCGCCGGCGGCTTAGGGAGTGTCCG GCGGCGGCACGCCCTCCCACGGTAAGCGAATTGGTCGCAAAAGCTTTGTC TGGCCTTCGACTTTTGGCGGCCACTGCGGCGGCGATGGTACGCGCCGCCG TCGCCCTGTTGACTGCGGTGGCGAAGCAGGCACACAGTTTGCTTGCGTCT GCGGTCAGCGAGGAGGGAGAGTATGATGAAGAGGATGAAGATAGCGAAGC ATTTGTGCACGCCATGATGCGGCACATGCGCGTGGGGACTTTGCTGCAAC GAGTTTGCGGCATTACTGGTCGATCACTGTGGATAGTCCAATAATGTAAG TAAATGGAGTCAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6505:149..3062+

>mRNA_P-wetherbeei_contig6505.1.1 ID=mRNA_P-wetherbeei_contig6505.1.1|Name=mRNA_P-wetherbeei_contig6505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2571bp|location=Sequence derived from alignment at P-wetherbeei_contig6505:149..3062+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGTTGACGAGACCGCGGAGGGTATCTCCTTTCCTTCTCTTGCTTAT
AGTGCACAAGATGCCAGCTGTAGCACACTTCAGCGCCGTCCACGCTGGGA
TGGCTCACCGCCGCTTAAGGACGACAAAAGAGCTCACCGAAGCTGTAGCA
GCTTTAGAGACACGAGCCGAGCGAATTGAAGCTGAGCTCACAAAGCTGCG
GACCCTATCAGCCGCGGGAAGCGAAGACGAAGTAAGAAATGCCAGGCCAG
TCGGTCCTAAGGACGCAGCCGAGGACGAATTCGAACCGACCATGAGGAAA
TGCTTGGCACGATTACGAAGCGGCGTTGGCGAGGACTTGGAGCTACGACT
ACGAGCGCTCATCGGCCTTGCTGACGCTGCTCCTGCAGAGGCCGGCGAGG
GGGAGGGCGCTGGAAAGGATGCCGCGGTGCAGCAGCGCGACGACTGGGTG
ACTGCGTGCGCGCGATGCTTGTCGCGGGGGTTGGAAGACGGCTCGCTACG
GCTCCGCCTGGCGGCCTCGGCTGATCACTTTGAGCGTCAGCTGGGCGGCG
CCGGGCAGCCGAACCGGAAGGAAGGGCCTGCGGCGTCGACAGCGGCAGAG
TTACCCCGTGCACCAACTTATGACAAGCCATCCTCTTCGCCGGCAGAGGG
CACGCTAGCGCCACAGCCGCCGCTGTCGCCCTCTTTGGATTCGGGTTCAG
TTGACGCCGAGGAGCTTTTGGACGCAGCGACGCTGCGGGCGAAAGCGATT
GCTATTATCCAGCAACGAATAGCAGCACAGGACGTGACGGTGCGAGCCGC
CACGGCAGAAGCCGTGCGCGCTTTGCCGGCGGACCAGCGGGCAGCCCTCG
ACGAGCTCCGCCGCTTCGCGTTCGGCGGCGACGACGATGGCAGTGGGGGT
GGTGGCAGCACTGGTGGCCTCGGCGGAGGCCACGGCGGTGGCCTCGGCGC
CGGCCTCACGGCCAGCGAGCGCGCGGCGCTGGAGACCGTGGTCATCTGCG
GCGACACGGACCAGATGCTGCTAGCGTTCCTGCGACCCGTCCACTTCGAC
ATGGCACGCGCCGCCGACACGCTGCGGCGGTGCTGCACCCTCCGGATTGA
GCGCCGCCTCGATGCGCTCTTCGCGCCGGGCCGTCGCGTCGCCGCCGACA
AGACGTGGCACCACCGTCGCTGCTGGCCGACGGGCTTCTTTGGCGCCGAC
GCCGACGGCAGCCCCGTCTTCCATGACCGCATGGGCCAGGCGGACGTGCG
GGCGCTGGGGCGGGGTGATGCGGCGGTGGACCTAGAGGAGCTCGTGACGC
TGTACATGCAGAACATGGAGGTGCGACGCCGCTGGGTGCTGACGCGCCGC
TCCCGGGAGCTCGGCCGCCCAGTGGTGCAGATGGTGACCGTCCTGGACCT
GCAAGGGATGGGCCTGGCGCACGCCAGCCCGACCGCCATCCGCTATACGC
GGACCATCGGCGAAATCTTCAAGACGATGTACGCTGACATGGTGAAAGGG
TTCTACATCATCAACACGCCGTGGGTCTTTTCCCGCGTCTGGGGCGTCGT
GGAGGGCTTCCTCGGCGAGGAAACCCTTGGCAAAATTCGCATCCTTGGCT
CGGGGCCGGCGGCGTTGACGAAGCTGCAGAGCTACGTGCCGGCGGAGGTG
ATTCCCACATTCCTCGGGGGGCCCACCGAGGCCGACGTCGGCCACCGGGA
CCCGATGTGGTGTGAAATCGACGCGGTGATGGCGGTGTTCGGTGACGGCG
GCGACCCGTTTGTGACGGAGGAGGAGATTGACATAGTCACGGCGGAGCTA
CGACGCGAGGAGCAGCGCCGACAGCGGCGGCGGCAACGGCAACAATCGTC
GGCGGAAGGGGCCGGAGCGCCGTCGGCGACGACGGCGATGACGGGAGCGG
CGCCCGAACAGGCGATGGCGGATGTGGCCGCGTTGGCAGTGTCCACCAGG
TCAACTGAAGCCTCGAAGGCTGGGGCCTCCGCACCGGCCGTTGTAGCAAA
AGGCGCCGCGTCCACTCCGCCCGGTGGAGGATGCAGCGAAGCGGAAGCGA
AGCCGAAGAAGGATCTTTCCAGCAGCGATGAAAGCAGCGGCGGCGATGGA
GAAGGGGAACGCGTCGTTGATGACAAAGACGATGAGGAAGGGTCTTACGA
CGACGGCATCTACGACGCTCCAAGCGATGACATCGACTCTTTGCCAGGCG
GCATCGAGAGCGAAGAGGATGACGAGGACGATTCGGCTCCGTCAGTTCGA
GTCCGCCGGCGGCTTAGGGAGTGTCCGGCGGCGGCACGCCCTCCCACGGT
AAGCGAATTGGTCGCAAAAGCTTTGTCTGGCCTTCGACTTTTGGCGGCCA
CTGCGGCGGCGATGGTACGCGCCGCCGTCGCCCTGTTGACTGCGGTGGCG
AAGCAGGCACACAGTTTGCTTGCGTCTGCGGTCAGCGAGGAGGGAGAGTA
TGATGAAGAGGATGAAGATAGCGAAGCATTTGTGCACGCCATGATGCGGC
ACATGCGCGTGGGGACTTTGCTGCAACGAGTTTGCGGCATTACTGGTCGA
TCACTGTGGATAGTCCAATAA
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