mRNA_P-wetherbeei_contig6504.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6504.5.1
Unique NamemRNA_P-wetherbeei_contig6504.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A3C0TYM5_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYM5_9PROT)

HSP 1 Score: 287 bits (734), Expect = 2.200e-94
Identity = 149/232 (64.22%), Postives = 179/232 (77.16%), Query Frame = 1
Query:   67 KLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILY 762
            + WLYG H VTAAL+NP RQK RLL T+   ++L  +        EI D+  I   LP GAVHQG+AL  +PLP+  LE VCA ++ A+ R+VVVLDQ+TDPHN GAILRS AAFGASA++ TG +APP TGVLAKAASGAL++ P++ V+NLAR LEQLAA+GFW VGL SEA QP+ EIDL+G+IA+VLGAEG G+R LT  KCDF+ARLPT   LASLNVSNAAAIILY
Sbjct:   23 RFWLYGWHAVTAALRNPVRQKYRLLATEGNVKSLTEQFPGHKAQLEIVDTARINSILPAGAVHQGLALLTQPLPELPLEQVCAPRDGAEPRMVVVLDQVTDPHNAGAILRSCAAFGASALIFTGHHAPPSTGVLAKAASGALELTPILRVSNLARTLEQLAAMGFWLVGLDSEAPQPVSEIDLSGNIAIVLGAEGGGLRQLTTRKCDFLARLPTRSKLASLNVSNAAAIILY 254          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A352KAQ4_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KAQ4_9PROT)

HSP 1 Score: 264 bits (675), Expect = 2.630e-85
Identity = 139/232 (59.91%), Postives = 174/232 (75.00%), Query Frame = 1
Query:   67 KLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILY 762
            + WLYGLH V AAL NPAR+K RL+TT+N A  L   + E    PEI  + AIA+ LP  AVHQG+AL V PLPD  L+ + +++++ ++++V +LDQ+TDPHNVGAILRS AAFGA A+++TGRNA   + VLAK ASGAL+ VP++ VTNLAR L+QLA LGFWRVGL S A+QPI    L G+IA+VLGAEGSG+R LT  KCD++ RLPT     SLNVSNAAAI LY
Sbjct:   25 QFWLYGLHAVAAALCNPARRKWRLVTTENGANQLGREIAESKLTPEIAKADAIARLLPENAVHQGVALAVSPLPDIDLQTLVSRKQDKERQIVCILDQVTDPHNVGAILRSCAAFGAVALIVTGRNAAGESAVLAKTASGALEHVPMVKVTNLARTLDQLAELGFWRVGLDSAASQPITSAALEGNIALVLGAEGSGIRALTQKKCDYLLRLPTEPGFPSLNVSNAAAIALY 256          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: B6IRN7_RHOCS (RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IRN7_RHOCS)

HSP 1 Score: 251 bits (641), Expect = 2.520e-80
Identity = 137/240 (57.08%), Postives = 166/240 (69.17%), Query Frame = 1
Query:   76 LYGLHTVTAALQNPARQKLRLLTTQNAAENL------AARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVRR 777
            +YGLH V AA  NP R+   L  T++A   L      AA LG   P P   +   + K LPPGAVHQG+AL   PLP+ A+E VC   E+  Q LV+VLDQ+TDPHNVGAI+RSAAAFGA AV++  R+APP TGVLAK ASGA+D VPL+ VTNLARAL+ L   GFW VGL     +P+ E+DLTG  A+VLG+EG G+R LT  +CD IARLPT   + SLNVSNAAA+ LYE+ RR
Sbjct:   11 IYGLHPVAAAWINPERRCRGLYVTESALAALDGAVQRAAELGLERPDPTFLEKEELDKLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESGARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVARR 250          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A2E5KQ02_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KQ02_9PROT)

HSP 1 Score: 250 bits (638), Expect = 1.290e-79
Identity = 141/262 (53.82%), Postives = 185/262 (70.61%), Query Frame = 1
Query:    1 HKTQGKEPHSGNQQGAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPP--PEITDSPA--IAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
            H+ + ++   G++ G+G  EG +LWLYG H V+AAL NP+R+   LL T +AA  LA  L  + P   P + +  A  I   LP GAVHQG+AL+   L    ++  CA +E+ ++ +VVVLD +TDP NVGA+LRSAAAFGA A+VLT  +AP  TG LAKAASGALD VP + ++NLA AL+QLA LG+WRVG+A +A   + E DL+G++A+VLGAEGSG+R LTA+KCD +ARLPTN     LNVSNAAA+ LYEI R
Sbjct:    6 HRRKHRKSRPGSRGGSGAREGQELWLYGHHAVSAALTNPSRKCQDLLVTPDAATRLAKTLDLLEPQRMPALQEVSAADIDAVLPGGAVHQGVALKASRLDQAHIDEACAVRED-ERNVVVVLDHVTDPQNVGAVLRSAAAFGARALVLTQSHAPSETGSLAKAASGALDTVPYVQISNLAHALDQLAELGYWRVGMALQAEMTLPECDLSGNVALVLGAEGSGLRRLTAAKCDHLARLPTNPDFPDLNVSNAAAVALYEITR 266          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: UPI0009FE23A9 (23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Rhodospirillum centenum TaxID=34018 RepID=UPI0009FE23A9)

HSP 1 Score: 251 bits (641), Expect = 4.600e-79
Identity = 137/240 (57.08%), Postives = 166/240 (69.17%), Query Frame = 1
Query:   76 LYGLHTVTAALQNPARQKLRLLTTQNAAENL------AARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVRR 777
            +YGLH V AA  NP R+   L  T++A   L      AA LG   P P   +   + K LPPGAVHQG+AL   PLP+ A+E VC   E+  Q LV+VLDQ+TDPHNVGAI+RSAAAFGA AV++  R+APP TGVLAK ASGA+D VPL+ VTNLARAL+ L   GFW VGL     +P+ E+DLTG  A+VLG+EG G+R LT  +CD IARLPT   + SLNVSNAAA+ LYE+ RR
Sbjct:  103 IYGLHPVAAAWINPERRCRGLYVTESALAALDGAVQRAAELGLERPDPTFLEKEELDKLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESGARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVARR 342          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A1X7PS32_AZOLI (23S rRNA (Guanosine2251-2'-O)-methyltransferase n=2 Tax=Azospirillum TaxID=191 RepID=A0A1X7PS32_AZOLI)

HSP 1 Score: 248 bits (632), Expect = 1.630e-78
Identity = 140/266 (52.63%), Postives = 177/266 (66.54%), Query Frame = 1
Query:    4 KTQGKEPHSGNQ--QGAGRSEGAK-LWLYGLHTVTAALQNPARQKLRLLTTQ------NAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
            ++ GK  H+  +  +G G   GA+  WLYGLH VTAA  NP R+  RLL T+      + A   A   G   P   I D   + + +PPGAVHQG+A  V PLPD  ++ +C +     Q ++VVLDQ+TDPHNVGAILRSAAAFGA AVV+T R+AP  TGVLAK+ASGAL+ VPL+ VTNLAR+L +L   GFW VGLA      + ++DLTG   +V+GAEGSG+R LT  +CD IARLPT   + SLNVSNAAA+ LYE+ R
Sbjct:   15 RSSGKPQHTPRETSKGGGGPRGAQGAWLYGLHPVTAAWTNPERRVHRLLATEAGRAALDGALATARTAGLSRPGLTIVDKTELDRLMPPGAVHQGVAADVAPLPDVGIDDLCNELAGESQAVIVVLDQVTDPHNVGAILRSAAAFGARAVVVTERHAPETTGVLAKSASGALEAVPLVRVTNLARSLAELQQAGFWSVGLAESGKGTLAQLDLTGKTVLVMGAEGSGLRRLTMERCDVIARLPTGGPVGSLNVSNAAAVALYEVAR 280          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A081BD68_9HYPH (RNA methyltransferase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BD68_9HYPH)

HSP 1 Score: 247 bits (630), Expect = 2.030e-78
Identity = 139/252 (55.16%), Postives = 176/252 (69.84%), Query Frame = 1
Query:   31 GNQQGAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPP---PEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVRR 777
            G+++GA  S G   ++YGLH V AALQNPAR   +LL TQNA   + AR     PP   P+IT +  I++ LPPGAVHQGIAL V PLP+  LE  C +        +VVLDQ+TDPHNVGAILRSAA FGASA+V+T RN+PP TGVLAKAASGA++ V +  + NL+RAL+ L  +GF  VGL  +A  P+ E+D    IA+V+GAEG+G+R LT   CD +A+LP +  + SLNVSNAAA+ LYEI RR
Sbjct:   23 GSRRGARPSGGQTPYIYGLHAVEAALQNPARTLHKLLATQNAWNEITARFAA--PPRIAPDITSAEEISRLLPPGAVHQGIALHVAPLPELDLEEACLEANR-----IVVLDQVTDPHNVGAILRSAAVFGASALVMTDRNSPPLTGVLAKAASGAVEHVKIAKIGNLSRALQSLKNMGFLTVGLDGDAETPLSEVDTARPIALVMGAEGAGLRRLTRETCDLLAKLPASGPMRSLNVSNAAAVALYEIARR 267          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A2S2CQC4_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CQC4_9PROT)

HSP 1 Score: 247 bits (631), Expect = 2.980e-78
Identity = 142/259 (54.83%), Postives = 173/259 (66.80%), Query Frame = 1
Query:   22 PHSGNQQGAG-RSEGAK-LWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGE------INPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
            P SG     G R  GA+ + LYGLH VTAA  NP R+  RLL T+     +   L E      + P P   D P + + LPPGAVHQG+ L   PLP+  LE V A+ E     +VVVLDQ+TDPHNVGAILRSAAAFGA AVV+T R+AP  TGVLAK+ASGAL+ VPL+ VTNL+RAL +L   GFW VGLA      + ++DL+G  A+VLGAEG+G+R LT  +CD IARLPT   + SLNVSNAAA+ LYE+ R
Sbjct:   30 PSSGRGGNRGERPRGAQGVLLYGLHPVTAAWLNPDRRIHRLLVTEAGRAAMEPVLAEARAKGLVRPMPSPADKPDLERMLPPGAVHQGVVLDTAPLPELGLEDVVAELEEEAPAVVVVLDQVTDPHNVGAILRSAAAFGAKAVVVTERHAPETTGVLAKSASGALEAVPLVRVTNLSRALGELQEAGFWSVGLAESGKSTLAQLDLSGRTALVLGAEGAGLRRLTMERCDMIARLPTGGPIGSLNVSNAAAVALYEVAR 288          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A8J2YXK8_9PROT (SpoU_sub_bind domain-containing protein n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YXK8_9PROT)

HSP 1 Score: 244 bits (622), Expect = 1.730e-77
Identity = 135/245 (55.10%), Postives = 169/245 (68.98%), Query Frame = 1
Query:   43 GAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINP-PPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
            G+  + G   WL+G H V AAL+NP R+  RL+ T+ AA  L + LG+ +   P+I    AIAK LPPGAVHQG+AL  +PL    LE V       ++ +VV LDQ+TDPHN+GAILRSAAAFGA+AV+L  RNAP  +G LAK+ASGA++ VPL+ V NLARAL+QL   GFW VGLA EA   +    L G + +VLG+EG G+R LT   CD +ARLPT   +ASLNVSNAAAI LYE+VR
Sbjct:    2 GSDEAAGGAPWLWGYHAVEAALRNPVRKIQRLVATEEAAAELESLLGDASSIEPQIVPRDAIAKLLPPGAVHQGVALLAKPLAPWLLEDVIRHLGTRERAIVVALDQVTDPHNIGAILRSAAAFGAAAVILPDRNAPEVSGTLAKSASGAVEHVPLVRVVNLARALDQLKKAGFWSVGLAGEADATLASHKLGGRVCLVLGSEGDGLRRLTRESCDLMARLPTQGPVASLNVSNAAAIALYELVR 246          
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: UPI001AE2642A (23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE2642A)

HSP 1 Score: 244 bits (622), Expect = 6.210e-77
Identity = 136/241 (56.43%), Postives = 167/241 (69.29%), Query Frame = 1
Query:   70 LWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPP----PEIT--DSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
            +WLYGLH   AA  N  R+  RLL T++    +   + E        P IT  +   + + LPPGAVHQGIAL V PLP+  +E +CA  E+    LVVVLDQ+TDPHNVGAILRSAAAFGA AV++T R+AP  TGVLAK+ASGAL+VVPL+ VTNLARAL +L   GFW VGLA    Q + + +LTG  A+V+GAEGSG+R LT  +CD IARLPT   + SLNVSNAAA+ LYE+ R
Sbjct:   46 VWLYGLHPSAAAWVNSERRIHRLLVTESGRAAMEPAMAEAKAKGLNRPGITRVERADLDRLLPPGAVHQGIALDVAPLPEVGIEDICAASESDSSALVVVLDQVTDPHNVGAILRSAAAFGAKAVLVTERHAPETTGVLAKSASGALEVVPLVRVTNLARALGELQEAGFWSVGLAESGAQTLAQCNLTGRTALVMGAEGSGLRRLTMERCDVIARLPTQGPVGSLNVSNAAAVALYEVAR 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYM5_9PROT2.200e-9464.2223S rRNA (Guanosine(2251)-2'-O)-methyltransferase ... [more]
A0A352KAQ4_9PROT2.630e-8559.9123S rRNA (Guanosine(2251)-2'-O)-methyltransferase ... [more]
B6IRN7_RHOCS2.520e-8057.08RNA methyltransferase, TrmH family, group 3 n=1 Ta... [more]
A0A2E5KQ02_9PROT1.290e-7953.8223S rRNA (Guanosine(2251)-2'-O)-methyltransferase ... [more]
UPI0009FE23A94.600e-7957.0823S rRNA (guanosine(2251)-2'-O)-methyltransferase ... [more]
A0A1X7PS32_AZOLI1.630e-7852.6323S rRNA (Guanosine2251-2'-O)-methyltransferase n=... [more]
A0A081BD68_9HYPH2.030e-7855.16RNA methyltransferase n=1 Tax=Tepidicaulis marinus... [more]
A0A2S2CQC4_9PROT2.980e-7854.8323S rRNA (Guanosine(2251)-2'-O)-methyltransferase ... [more]
A0A8J2YXK8_9PROT1.730e-7755.10SpoU_sub_bind domain-containing protein n=1 Tax=Al... [more]
UPI001AE2642A6.210e-7756.4323S rRNA (guanosine(2251)-2'-O)-methyltransferase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6504contigP-wetherbeei_contig6504:2032..2832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog414684.RC1_0689
Preferred namerlmB
PFAMsSpoU_methylase,SpoU_sub_bind
Model size801
Max annot lvl204441|Rhodospirillales
KEGG koko:K03218
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.13e-81
EggNOG OGsCOG0566@1|root,COG0566@2|Bacteria,1MWCM@1224|Proteobacteria,2TUG7@28211|Alphaproteobacteria,2JQU3@204441|Rhodospirillales
EC2.1.1.185
DescriptionBelongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Cds size801
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.605296-CDS-P-wetherbeei_contig6504:2031..28321683186918.605296-CDS-P-wetherbeei_contig6504:2031..2832Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6504 2032..2832 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6504.5.1prot_P-wetherbeei_contig6504.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6504 2032..2832 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6504.5.1

>prot_P-wetherbeei_contig6504.5.1 ID=prot_P-wetherbeei_contig6504.5.1|Name=mRNA_P-wetherbeei_contig6504.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
HKTQGKEPHSGNQQGAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQ
NAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRAL
EVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAP
PPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPI
GEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAA
IILYEIVRRHSASQEI*
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mRNA from alignment at P-wetherbeei_contig6504:2032..2832-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6504.5.1 ID=mRNA_P-wetherbeei_contig6504.5.1|Name=mRNA_P-wetherbeei_contig6504.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig6504:2032..2832- (Phaeothamnion wetherbeei SAG_119_79)
CACAAGACGCAGGGCAAGGAACCACACAGTGGCAATCAGCAGGGTGCTGG CCGGTCTGAGGGGGCGAAGCTGTGGCTGTATGGCCTGCATACGGTGACAG CAGCGCTGCAAAACCCGGCGCGGCAGAAATTACGCCTGCTGACCACCCAA AATGCCGCAGAAAATCTGGCGGCAAGGCTGGGAGAAATTAACCCGCCGCC GGAAATAACAGATTCCCCCGCCATTGCCAAGCAATTGCCCCCTGGCGCGG TGCATCAGGGTATCGCCTTGCAGGTGCGCCCCCTGCCCGATCGCGCCCTG GAAGTGGTCTGCGCAAAACAGGAGAATGCACAGCAACGCCTTGTTGTGGT GCTGGACCAGCTGACGGACCCGCATAATGTGGGGGCGATTCTGCGTTCAG CGGCGGCATTCGGTGCATCCGCCGTAGTGCTGACCGGCCGCAACGCCCCG CCCCCGACAGGGGTTCTGGCCAAGGCGGCCTCCGGCGCACTGGATGTCGT GCCCCTGATCTATGTCACCAATCTGGCCCGGGCGCTGGAACAATTGGCAG CGCTGGGGTTCTGGCGGGTCGGGCTGGCATCGGAAGCAACACAACCTATA GGAGAAATTGATCTGACAGGTGATATTGCGGTAGTGCTTGGGGCGGAAGG CAGCGGCATGCGCCATCTGACGGCCAGCAAATGTGATTTCATCGCCCGTC TGCCGACAAACCAGACGCTTGCCAGCTTGAACGTTTCCAATGCAGCGGCG ATTATCCTGTATGAAATTGTGCGGCGGCACTCTGCAAGCCAGGAAATATG A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6504:2032..2832-

>mRNA_P-wetherbeei_contig6504.5.1 ID=mRNA_P-wetherbeei_contig6504.5.1|Name=mRNA_P-wetherbeei_contig6504.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig6504:2032..2832- (Phaeothamnion wetherbeei SAG_119_79)
CACAAGACGCAGGGCAAGGAACCACACAGTGGCAATCAGCAGGGTGCTGG
CCGGTCTGAGGGGGCGAAGCTGTGGCTGTATGGCCTGCATACGGTGACAG
CAGCGCTGCAAAACCCGGCGCGGCAGAAATTACGCCTGCTGACCACCCAA
AATGCCGCAGAAAATCTGGCGGCAAGGCTGGGAGAAATTAACCCGCCGCC
GGAAATAACAGATTCCCCCGCCATTGCCAAGCAATTGCCCCCTGGCGCGG
TGCATCAGGGTATCGCCTTGCAGGTGCGCCCCCTGCCCGATCGCGCCCTG
GAAGTGGTCTGCGCAAAACAGGAGAATGCACAGCAACGCCTTGTTGTGGT
GCTGGACCAGCTGACGGACCCGCATAATGTGGGGGCGATTCTGCGTTCAG
CGGCGGCATTCGGTGCATCCGCCGTAGTGCTGACCGGCCGCAACGCCCCG
CCCCCGACAGGGGTTCTGGCCAAGGCGGCCTCCGGCGCACTGGATGTCGT
GCCCCTGATCTATGTCACCAATCTGGCCCGGGCGCTGGAACAATTGGCAG
CGCTGGGGTTCTGGCGGGTCGGGCTGGCATCGGAAGCAACACAACCTATA
GGAGAAATTGATCTGACAGGTGATATTGCGGTAGTGCTTGGGGCGGAAGG
CAGCGGCATGCGCCATCTGACGGCCAGCAAATGTGATTTCATCGCCCGTC
TGCCGACAAACCAGACGCTTGCCAGCTTGAACGTTTCCAATGCAGCGGCG
ATTATCCTGTATGAAATTGTGCGGCGGCACTCTGCAAGCCAGGAAATATG
A
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