mRNA_P-wetherbeei_contig6504.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A3C0TYM5_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYM5_9PROT) HSP 1 Score: 287 bits (734), Expect = 2.200e-94 Identity = 149/232 (64.22%), Postives = 179/232 (77.16%), Query Frame = 1
Query: 67 KLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILY 762
+ WLYG H VTAAL+NP RQK RLL T+ ++L + EI D+ I LP GAVHQG+AL +PLP+ LE VCA ++ A+ R+VVVLDQ+TDPHN GAILRS AAFGASA++ TG +APP TGVLAKAASGAL++ P++ V+NLAR LEQLAA+GFW VGL SEA QP+ EIDL+G+IA+VLGAEG G+R LT KCDF+ARLPT LASLNVSNAAAIILY
Sbjct: 23 RFWLYGWHAVTAALRNPVRQKYRLLATEGNVKSLTEQFPGHKAQLEIVDTARINSILPAGAVHQGLALLTQPLPELPLEQVCAPRDGAEPRMVVVLDQVTDPHNAGAILRSCAAFGASALIFTGHHAPPSTGVLAKAASGALELTPILRVSNLARTLEQLAAMGFWLVGLDSEAPQPVSEIDLSGNIAIVLGAEGGGLRQLTTRKCDFLARLPTRSKLASLNVSNAAAIILY 254
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A352KAQ4_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KAQ4_9PROT) HSP 1 Score: 264 bits (675), Expect = 2.630e-85 Identity = 139/232 (59.91%), Postives = 174/232 (75.00%), Query Frame = 1
Query: 67 KLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILY 762
+ WLYGLH V AAL NPAR+K RL+TT+N A L + E PEI + AIA+ LP AVHQG+AL V PLPD L+ + +++++ ++++V +LDQ+TDPHNVGAILRS AAFGA A+++TGRNA + VLAK ASGAL+ VP++ VTNLAR L+QLA LGFWRVGL S A+QPI L G+IA+VLGAEGSG+R LT KCD++ RLPT SLNVSNAAAI LY
Sbjct: 25 QFWLYGLHAVAAALCNPARRKWRLVTTENGANQLGREIAESKLTPEIAKADAIARLLPENAVHQGVALAVSPLPDIDLQTLVSRKQDKERQIVCILDQVTDPHNVGAILRSCAAFGAVALIVTGRNAAGESAVLAKTASGALEHVPMVKVTNLARTLDQLAELGFWRVGLDSAASQPITSAALEGNIALVLGAEGSGIRALTQKKCDYLLRLPTEPGFPSLNVSNAAAIALY 256
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: B6IRN7_RHOCS (RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IRN7_RHOCS) HSP 1 Score: 251 bits (641), Expect = 2.520e-80 Identity = 137/240 (57.08%), Postives = 166/240 (69.17%), Query Frame = 1
Query: 76 LYGLHTVTAALQNPARQKLRLLTTQNAAENL------AARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVRR 777
+YGLH V AA NP R+ L T++A L AA LG P P + + K LPPGAVHQG+AL PLP+ A+E VC E+ Q LV+VLDQ+TDPHNVGAI+RSAAAFGA AV++ R+APP TGVLAK ASGA+D VPL+ VTNLARAL+ L GFW VGL +P+ E+DLTG A+VLG+EG G+R LT +CD IARLPT + SLNVSNAAA+ LYE+ RR
Sbjct: 11 IYGLHPVAAAWINPERRCRGLYVTESALAALDGAVQRAAELGLERPDPTFLEKEELDKLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESGARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVARR 250
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A2E5KQ02_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KQ02_9PROT) HSP 1 Score: 250 bits (638), Expect = 1.290e-79 Identity = 141/262 (53.82%), Postives = 185/262 (70.61%), Query Frame = 1
Query: 1 HKTQGKEPHSGNQQGAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPP--PEITDSPA--IAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
H+ + ++ G++ G+G EG +LWLYG H V+AAL NP+R+ LL T +AA LA L + P P + + A I LP GAVHQG+AL+ L ++ CA +E+ ++ +VVVLD +TDP NVGA+LRSAAAFGA A+VLT +AP TG LAKAASGALD VP + ++NLA AL+QLA LG+WRVG+A +A + E DL+G++A+VLGAEGSG+R LTA+KCD +ARLPTN LNVSNAAA+ LYEI R
Sbjct: 6 HRRKHRKSRPGSRGGSGAREGQELWLYGHHAVSAALTNPSRKCQDLLVTPDAATRLAKTLDLLEPQRMPALQEVSAADIDAVLPGGAVHQGVALKASRLDQAHIDEACAVRED-ERNVVVVLDHVTDPQNVGAVLRSAAAFGARALVLTQSHAPSETGSLAKAASGALDTVPYVQISNLAHALDQLAELGYWRVGMALQAEMTLPECDLSGNVALVLGAEGSGLRRLTAAKCDHLARLPTNPDFPDLNVSNAAAVALYEITR 266
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: UPI0009FE23A9 (23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Rhodospirillum centenum TaxID=34018 RepID=UPI0009FE23A9) HSP 1 Score: 251 bits (641), Expect = 4.600e-79 Identity = 137/240 (57.08%), Postives = 166/240 (69.17%), Query Frame = 1
Query: 76 LYGLHTVTAALQNPARQKLRLLTTQNAAENL------AARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVRR 777
+YGLH V AA NP R+ L T++A L AA LG P P + + K LPPGAVHQG+AL PLP+ A+E VC E+ Q LV+VLDQ+TDPHNVGAI+RSAAAFGA AV++ R+APP TGVLAK ASGA+D VPL+ VTNLARAL+ L GFW VGL +P+ E+DLTG A+VLG+EG G+R LT +CD IARLPT + SLNVSNAAA+ LYE+ RR
Sbjct: 103 IYGLHPVAAAWINPERRCRGLYVTESALAALDGAVQRAAELGLERPDPTFLEKEELDKLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESGARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVARR 342
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A1X7PS32_AZOLI (23S rRNA (Guanosine2251-2'-O)-methyltransferase n=2 Tax=Azospirillum TaxID=191 RepID=A0A1X7PS32_AZOLI) HSP 1 Score: 248 bits (632), Expect = 1.630e-78 Identity = 140/266 (52.63%), Postives = 177/266 (66.54%), Query Frame = 1
Query: 4 KTQGKEPHSGNQ--QGAGRSEGAK-LWLYGLHTVTAALQNPARQKLRLLTTQ------NAAENLAARLGEINPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
++ GK H+ + +G G GA+ WLYGLH VTAA NP R+ RLL T+ + A A G P I D + + +PPGAVHQG+A V PLPD ++ +C + Q ++VVLDQ+TDPHNVGAILRSAAAFGA AVV+T R+AP TGVLAK+ASGAL+ VPL+ VTNLAR+L +L GFW VGLA + ++DLTG +V+GAEGSG+R LT +CD IARLPT + SLNVSNAAA+ LYE+ R
Sbjct: 15 RSSGKPQHTPRETSKGGGGPRGAQGAWLYGLHPVTAAWTNPERRVHRLLATEAGRAALDGALATARTAGLSRPGLTIVDKTELDRLMPPGAVHQGVAADVAPLPDVGIDDLCNELAGESQAVIVVLDQVTDPHNVGAILRSAAAFGARAVVVTERHAPETTGVLAKSASGALEAVPLVRVTNLARSLAELQQAGFWSVGLAESGKGTLAQLDLTGKTVLVMGAEGSGLRRLTMERCDVIARLPTGGPVGSLNVSNAAAVALYEVAR 280
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A081BD68_9HYPH (RNA methyltransferase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BD68_9HYPH) HSP 1 Score: 247 bits (630), Expect = 2.030e-78 Identity = 139/252 (55.16%), Postives = 176/252 (69.84%), Query Frame = 1
Query: 31 GNQQGAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPP---PEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVRR 777
G+++GA S G ++YGLH V AALQNPAR +LL TQNA + AR PP P+IT + I++ LPPGAVHQGIAL V PLP+ LE C + +VVLDQ+TDPHNVGAILRSAA FGASA+V+T RN+PP TGVLAKAASGA++ V + + NL+RAL+ L +GF VGL +A P+ E+D IA+V+GAEG+G+R LT CD +A+LP + + SLNVSNAAA+ LYEI RR
Sbjct: 23 GSRRGARPSGGQTPYIYGLHAVEAALQNPARTLHKLLATQNAWNEITARFAA--PPRIAPDITSAEEISRLLPPGAVHQGIALHVAPLPELDLEEACLEANR-----IVVLDQVTDPHNVGAILRSAAVFGASALVMTDRNSPPLTGVLAKAASGAVEHVKIAKIGNLSRALQSLKNMGFLTVGLDGDAETPLSEVDTARPIALVMGAEGAGLRRLTRETCDLLAKLPASGPMRSLNVSNAAAVALYEIARR 267
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A2S2CQC4_9PROT (23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CQC4_9PROT) HSP 1 Score: 247 bits (631), Expect = 2.980e-78 Identity = 142/259 (54.83%), Postives = 173/259 (66.80%), Query Frame = 1
Query: 22 PHSGNQQGAG-RSEGAK-LWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGE------INPPPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
P SG G R GA+ + LYGLH VTAA NP R+ RLL T+ + L E + P P D P + + LPPGAVHQG+ L PLP+ LE V A+ E +VVVLDQ+TDPHNVGAILRSAAAFGA AVV+T R+AP TGVLAK+ASGAL+ VPL+ VTNL+RAL +L GFW VGLA + ++DL+G A+VLGAEG+G+R LT +CD IARLPT + SLNVSNAAA+ LYE+ R
Sbjct: 30 PSSGRGGNRGERPRGAQGVLLYGLHPVTAAWLNPDRRIHRLLVTEAGRAAMEPVLAEARAKGLVRPMPSPADKPDLERMLPPGAVHQGVVLDTAPLPELGLEDVVAELEEEAPAVVVVLDQVTDPHNVGAILRSAAAFGAKAVVVTERHAPETTGVLAKSASGALEAVPLVRVTNLSRALGELQEAGFWSVGLAESGKSTLAQLDLSGRTALVLGAEGAGLRRLTMERCDMIARLPTGGPIGSLNVSNAAAVALYEVAR 288
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: A0A8J2YXK8_9PROT (SpoU_sub_bind domain-containing protein n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YXK8_9PROT) HSP 1 Score: 244 bits (622), Expect = 1.730e-77 Identity = 135/245 (55.10%), Postives = 169/245 (68.98%), Query Frame = 1
Query: 43 GAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINP-PPEITDSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
G+ + G WL+G H V AAL+NP R+ RL+ T+ AA L + LG+ + P+I AIAK LPPGAVHQG+AL +PL LE V ++ +VV LDQ+TDPHN+GAILRSAAAFGA+AV+L RNAP +G LAK+ASGA++ VPL+ V NLARAL+QL GFW VGLA EA + L G + +VLG+EG G+R LT CD +ARLPT +ASLNVSNAAAI LYE+VR
Sbjct: 2 GSDEAAGGAPWLWGYHAVEAALRNPVRKIQRLVATEEAAAELESLLGDASSIEPQIVPRDAIAKLLPPGAVHQGVALLAKPLAPWLLEDVIRHLGTRERAIVVALDQVTDPHNIGAILRSAAAFGAAAVILPDRNAPEVSGTLAKSASGAVEHVPLVRVVNLARALDQLKKAGFWSVGLAGEADATLASHKLGGRVCLVLGSEGDGLRRLTRESCDLMARLPTQGPVASLNVSNAAAIALYELVR 246
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Match: UPI001AE2642A (23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE2642A) HSP 1 Score: 244 bits (622), Expect = 6.210e-77 Identity = 136/241 (56.43%), Postives = 167/241 (69.29%), Query Frame = 1
Query: 70 LWLYGLHTVTAALQNPARQKLRLLTTQNAAENLAARLGEINPP----PEIT--DSPAIAKQLPPGAVHQGIALQVRPLPDRALEVVCAKQENAQQRLVVVLDQLTDPHNVGAILRSAAAFGASAVVLTGRNAPPPTGVLAKAASGALDVVPLIYVTNLARALEQLAALGFWRVGLASEATQPIGEIDLTGDIAVVLGAEGSGMRHLTASKCDFIARLPTNQTLASLNVSNAAAIILYEIVR 774
+WLYGLH AA N R+ RLL T++ + + E P IT + + + LPPGAVHQGIAL V PLP+ +E +CA E+ LVVVLDQ+TDPHNVGAILRSAAAFGA AV++T R+AP TGVLAK+ASGAL+VVPL+ VTNLARAL +L GFW VGLA Q + + +LTG A+V+GAEGSG+R LT +CD IARLPT + SLNVSNAAA+ LYE+ R
Sbjct: 46 VWLYGLHPSAAAWVNSERRIHRLLVTESGRAAMEPAMAEAKAKGLNRPGITRVERADLDRLLPPGAVHQGIALDVAPLPEVGIEDICAASESDSSALVVVLDQVTDPHNVGAILRSAAAFGAKAVLVTERHAPETTGVLAKSASGALEVVPLVRVTNLARALGELQEAGFWSVGLAESGAQTLAQCNLTGRTALVMGAEGSGLRRLTMERCDVIARLPTQGPVGSLNVSNAAAVALYEVAR 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6504.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6504.5.1 >prot_P-wetherbeei_contig6504.5.1 ID=prot_P-wetherbeei_contig6504.5.1|Name=mRNA_P-wetherbeei_contig6504.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp HKTQGKEPHSGNQQGAGRSEGAKLWLYGLHTVTAALQNPARQKLRLLTTQback to top mRNA from alignment at P-wetherbeei_contig6504:2032..2832- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6504.5.1 ID=mRNA_P-wetherbeei_contig6504.5.1|Name=mRNA_P-wetherbeei_contig6504.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig6504:2032..2832- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6504:2032..2832- >mRNA_P-wetherbeei_contig6504.5.1 ID=mRNA_P-wetherbeei_contig6504.5.1|Name=mRNA_P-wetherbeei_contig6504.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig6504:2032..2832- (Phaeothamnion wetherbeei SAG_119_79)back to top |