mRNA_P-wetherbeei_contig65.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig65.6.1
Unique NamemRNA_P-wetherbeei_contig65.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 4.130e-76
Identity = 175/434 (40.32%), Postives = 209/434 (48.16%), Query Frame = 1
Query:   22 RLFLWFLLAVDSLPLVVCFSTANPFGAAVGRHETRFERSSPLASSRQTAAPLFSSVKNGENDYVSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTL-APKQIMRPAGTSAPYGDSA--------------------NPKATVSATYYFNGDPNVVFRFRLYTFENALPEAP--RGAAVVMRLWRLLPAVEARLRANGYRLEKVDW-------------------DALDPDGT----VAEEMRGCEIYW---------RPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRDGKFIYGNQRGVPYRMRRVTPGGSLVWTMGPEHRPAELFAQKMAAITTALPAGGGIAPPGRYSTAA 1158
            R+ L  L  V S  L+V ++ +        R   + +RS     S      L  S     +  VSELL+LF G+FDNYDQV+ DR  GMT G GGGHEHIHC L+ +     P Q+                                   P A V+A YYFNGD NVVFR+RLY+F    P  P  RG AV MRLWRLLP VEARLRAN Y L    W                   D    +G     V E M GCEIYW           ++    SG     A+  A V E GA                A   G   + GLMG++D GTW+ SQ   G  ILVKDDL LW D L VNDRGF RDG F+YGNQR VPY+MRRVT GG L WT+G  HR  + +A+KM+AI   L  G  + PP R +  A
Sbjct:    4 RVVLLLLQVVPSAGLLVSWTASR------SRLSQKVQRSCTSVDSHTPGGGL--SGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAV-MRLWRLLPHVEARLRANSYDLTSFSWSDDDSNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRHQAGGEDEKSMPGGISGPGKQDANGGA-VPERGA-------------GEDAAGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAIGVTL--GQRLRPPVRVAAPA 412          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 163 bits (413), Expect = 1.490e-41
Identity = 102/271 (37.64%), Postives = 138/271 (50.92%), Query Frame = 1
Query:  232 FDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPRGAAVVMRLWRLLPAVEARLRANGYRLEKVDWDALDPDGTVAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRDGKFIYGNQRGVPYRMRRVTPGGSLVWT 1044
            F+GDFDNYDQVL+++ LG T GEGGGHEHIHC+L  +                  G++++    + A YYFNGDPN V+R R+Y  E  L ++     + MR++R     EARLRA GYR+ ++DW   D    + E ++GCE++W    R  F  A A                              +   GP  + G M     G  + S       ILVKDDL L  + L VNDRGF  +G F+YGN+RGVPY+M+R +    L WT
Sbjct:  268 FEGDFDNYDQVLENKRLGFTEGEGGGHEHIHCKLSRI------------------GENSS---MIFAKYYFNGDPNSVYRARVY--EIFLDDSDDKGVIEMRIYRFYAETEARLRACGYRINEIDWTGDD----LYEWLQGCEVFWE---RRKFKTAQA---------------------------LEQSEIIGPFFFRGFMAGG--GCTVFSPTMKSR-ILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A7S1XBU0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBU0_9RHOD)

HSP 1 Score: 142 bits (357), Expect = 6.750e-35
Identity = 92/279 (32.97%), Postives = 134/279 (48.03%), Query Frame = 1
Query:  211 VSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPRGAAVVMRLWRLLPAVEARLRANGYRLEKVDWDALDPDGTVAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRDGKFIYGNQRGVPYRMRRVTPGGSLVWTM 1047
            + E L  F GDFDNY QV Q+RALG+   EGGGHEHIHC+L+++                   DS      + A YYF+G+P+ +FR RLY    ++ ++     + MR++R     E+RLR + + + KVD    D    + E + GCE++W                                     G G V  + +  P + G M     G  + S+   G  I +KDDL +    L VNDRGF  +G ++YGN+RG+ Y+M+RV PG  L WT+
Sbjct:  109 MDEFLAWFSGDFDNYAQVAQERALGLFPREGGGHEHIHCQLQNL-------------------DSTLGNGHIFAKYYFDGNPSKIFRSRLYRV--SISDSSASGELEMRIYRFYAETESRLREHNFDVTKVDLTKDD----LYEWLEGCEVFWYK-----------------------------------GDGNVEGL-NHQPHFIGYM--EGGGCSVFSREIQGM-IHIKDDLIMTQKDLWVNDRGFTDNGDYVYGNRRGIHYKMQRVLPGDELWWTV 323          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 132 bits (331), Expect = 2.270e-31
Identity = 109/341 (31.96%), Postives = 146/341 (42.82%), Query Frame = 1
Query:  178 FSSVKNGENDYVSEL--------LRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPRGAAVVMRLWRLLPAVEARLRANGYRLEKVDWDALDPDGTVAEEMR---GCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRDG-KFIYGNQRGVPYRMRRVTP-----GGSLV-----WTMGPEHRPAELFAQKMAAITTALPAGGGIAP 1134
            F+S  N  +D+V  L        L  F GDFDNY+QV+ DR  G+   EGGGHEHIHC L  V+  A                         A +YF+G P  +FRFR Y   + +P        V  L  L P +E RLR      +   W     +  V   ++    C++ W   + P               VQ                    A+ +GP     +M   +    + SQ+ PG  IL+KD L LW D L ++DRGF  D  +FIYGNQRGVPYR+ RVT      G ++V     WT+GP+ R    +  KM A+      GGG  P
Sbjct:   44 FASNTNSASDHVGNLDASVWKALLDRFQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLVPVSETARL-----------------------AAFYFDGVPGAIFRFRFY---DLIPVDESTIDTV--LHTLHPELERRLRRCP---DPSSWPLFFEEFGVKGRVQLLPKCDVRWSWVLDP---------------VQHD-----------------YALDEGPNGLHAVMVHGE--ALVESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAV------GGGSRP 313          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.670e-31
Identity = 59/100 (59.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  799 AIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRDGKFIYGNQRGVPYRMRRVTPGGSLVWTMGPEHRPAELFAQKMAAI 1098
            A   G   + GLMGE+D GTW+ SQ   G  ILVKDDL LW D L VNDRGF R G F+YGNQR VPY+MRRVT GG L WT+G  HR  + +A++M+AI
Sbjct:   27 AAGGGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAI 126          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A7S0LSC6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSC6_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 7.490e-30
Identity = 103/327 (31.50%), Postives = 136/327 (41.59%), Query Frame = 1
Query:   40 LLAVDSLPLVVCFSTANPFGAAVGRHETRFERSSPLASSRQTAAPLFSSVKNGENDYVSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPRGAAVVMRLWRLLPAVEARLRANGYRLEKVDWDALDPD-GTVAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRDGKFIYGNQRGVPYRMRRV 1017
            LLAV    +V+ F+ A+  G A G             SSR     + +S    +    +E L  F G FDN  QV+ +R +G+T  EGGGHEHIHC L+                S P+G S  P   V A YYFNG P  +FR RLY+      +   G  + M+++RL    EA LRA G     V W A D   G +  E   CE+YW                        SG                         +EG M    D   + S V     ++V+DD+ L    L  NDRG   +G ++YGN  GVPY+M RV
Sbjct:   20 LLAV----MVLAFTAAS--GYAFGGAGVCVTPRMHAVSSRTALLSVVTSYAAEQTTSFTEFLNCFHGHFDNVAQVVSEREMGLTPREGGGHEHIHCHLQ----------------SLPFG-SGEPCKVVLANYYFNGQPESIFRTRLYSMRVQTADRDFGDCIEMQIYRLRAEQEALLRAAGGDASAVQWGAADVSPGLLIPE---CEVYW----------------------SHSG-----------------------DRFEGRM--RADSITVQSPVLKK-AVIVQDDVALSEKYLWCNDRGHDTEGNYVYGNIHGVPYKMDRV 272          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 128 bits (321), Expect = 2.430e-29
Identity = 119/408 (29.17%), Postives = 172/408 (42.16%), Query Frame = 1
Query:   43 LAVDSLPLVVCFSTANPFGAAVGRHETRFERSSPLASSRQTAAPLFSSVKNGENDYVSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVS----ATYYFNGDPNVVFRFRLYTF----ENALPEAPRGAAVV-MRLWRLLPAVEARLRANG---------------------YRLEKVDWDALDPDGTVAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISS-QVAPGFGILVKDDLGLWSDVLCVNDRGFGRDGK-----------FIYGNQRGVPYRMRRV-----TPG---------GSLVWTMGPEHRPAELFAQKMAAI 1098
            LAV     ++ FS A+P   +    +T  +RS+ +   R  A  +     +GE  Y   L   F GDFDNY+QV+ DR  G+T G GGGHEHIHC      TL P            +GD A      S    A +YFNG+P  +FRFR Y       + + +   G+AVV M+L  L P +E  LR                        +  + + W    P  ++   ++GC++ W       +  A  S     A   +              +  +T+  D    +   M     G  + S  + PG  IL+KD+L LW D   +NDRG+  DG+           F+YGN+RGVPY++ RV     T G         G L WT+G  +R    +  K+ AI
Sbjct:   30 LAVGCSDGLLAFSRASPHSNS----KTARQRSTIV---RTIAREVDCDKSSGE--YFRRLTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHC------TLVP---------CPDFGDDAEGDTRRSRWILAAFYFNGNPQQIFRFRAYQLWAPDHDGMDD---GSAVVRMKLNTLSPILEQALRKRSEEPCSWWRTAWKVWSGEDKKKFHEDIIPWSQFIP--SLVSPLQGCDVLWEED----WDAAKHSYLLDNAYNSDE-------------SNDITSFCD--TSFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A0M0JTV4_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JTV4_9EUKA)

HSP 1 Score: 116 bits (291), Expect = 1.610e-26
Identity = 87/276 (31.52%), Postives = 120/276 (43.48%), Query Frame = 1
Query:  211 VSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPR-GAAVVMRLWRLLPAVEARLRANGYRLEKVDWDALDPDGTVAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVA-----PGFGILVKDDLGLWSDVLCVNDRGFGRD-GKFIYGNQRGVPYRMRRV 1017
            +S  L  F G FDN++QV  ++  G+T  EGGGHEHIHC L+ VT        RP G              V A+YYFNGDP+ VFR RLY  +  LP  P+ G  V MR++++  +   RLRA G  L  V W A + D   +  +   +++WR                                                  W    GE  +G+  +  +       G  I V+DD+ LW D L VNDR    + G ++YGN   +PY+M RV
Sbjct:   29 LSRFLSQFRGHFDNHEQVETEKLAGLTPREGGGHEHIHCSLQPVTLHD-----RPQGQY------------VLASYYFNGDPDAVFRERLYAIDE-LPRDPQFGTCVRMRIYKMRLSTAERLRA-GMTLNDVAWSAAE-DLHASLHVPEADVFWR--------------------------------------------------W---CGERFEGSMRTQSIEIISERSGRAIRVRDDVALWQDALWVNDRATDAETGAYVYGNIHDIPYKMARV 231          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A7R9ZKH3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKH3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.380e-26
Identity = 102/338 (30.18%), Postives = 144/338 (42.60%), Query Frame = 1
Query:  181 SSVKNGENDYVSELLR-LFDGDFDNYDQVLQDRALG-MTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPRGAAVVMRLWRLLPAVEARLRAN-GYRLEKVDWDALDPDGTVAEEMRGCEIYW---RPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGLWSDVLCVNDRGFGRD-GKFIYGNQRGVPYRMRRVTP--GG-----------------------SLVWTMGPEHRPAELFAQKMAAI 1098
            S+ +  E   +  L + LF GDFDNY+QVLQDR  G +T  EGG HEHIHC L  +T                       + +  A +YF G P  +FRFR Y  +   P+        M+L+ + P +  +L+A  G R + +   AL  D ++  E+  C+I W   R  V+ A+       A                      T  + AI         + G+      + SQ+ PG  I + D L L+ DV  +NDRGF  +  ++IYGNQR VPYR+ RV    GG                       SL WT+G  HR  E +  K+  I
Sbjct:   84 STAQTDETATIQRLFQTLFQGDFDNYNQVLQDREDGYLTPREGGQHEHIHCTLVPIT-----------------------ETSRLAAFYFEGQPQRIFRFRYYELQ---PDC------CMKLYTVAPHIFQKLQAEVGGRWKSIFHRALQNDRSILTELPKCDIAWSVARDAVQHAYLDDDHDDAD---------------------TECMHAIM--------VHGQ----AIVESQMMPGQKIKILDQLSLYDDVFYINDRGFNPETNEYIYGNQRSVPYRLERVAKWKGGDADEDNDADDSVVTMVGRDVVNESLAWTLGDAHRTPEEYKSKIDEI 356          
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.630e-24
Identity = 106/388 (27.32%), Postives = 147/388 (37.89%), Query Frame = 1
Query:  184 SVKNGENDYVSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEHIHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVFRFRLYTFENALPEAPR-----GAAVVMRLWRLLPAVEARLRA--------------------NGYRLEKVD-----WDALDPDGT--VAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAXXXXXXRAGPGTGAVTAIADGPPLWEGLMGENDDGTWISS-QVAPGFGILVKDDLGLWSDVLCVNDRGFGRDG--------------------KFIYGNQRGVPYRMRRV-------TPGGS-------------------LVWTMGPEHRPAELFAQKMAAITTAL 1110
            +  +  ++Y   LL  F GDFDNY QV++DR   +   +GGGHEHIHC L      A  Q  R            N    + A +YFNG+P  +FRFR+Y   +   +        G  V M+L  L   +E +LR                     N    E  D     W+    +G   +   + GC++ W P   P           A   V E G        + P T       DG       M     G  + S  + PG  IL+KD+L LW D   +NDRG+  D                      F+YGN+RGVPY++ RV       T  GS                   L WT+G + R    + +K+ A+  AL
Sbjct:   51 ATSDDSDNYFHHLLSQFQGDFDNYHQVIRDRNHALAPADGGGHEHIHCTLVPCPHTAVTQEQR-----------QNNDQWILAAFYFNGNPRQIFRFRMYKLISPQDDDSNSNNIDGEKVRMKLHTLSSELEQQLRQYSDQPCTWWRETYDVWLNSINEGENESDDNRSNEWNTFRSEGIQHLVSPLVGCDVLWDPQWDPKKH--------AYLNVDEYG----NDTSSSPTTINKNNNVDG---CHATMEAGSAGAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAVEEAL 412          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig65.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE4.130e-7640.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4Z4Z5_PORPP1.490e-4137.64Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1XBU0_9RHOD6.750e-3532.97Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
B7G7Q1_PHATC2.270e-3131.96Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
D7G1T3_ECTSI2.670e-3159.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0LSC6_9EUKA7.490e-3031.50Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
K0TER5_THAOC2.430e-2929.17Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A0M0JTV4_9EUKA1.610e-2631.52Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7R9ZKH3_9STRA2.380e-2630.18Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2PZJ6_9STRA1.630e-2427.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig65contigP-wetherbeei_contig65:4519..5853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2903.EOD07558
PFAMsCpeT
Model size1335
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons1
Evalue3.31e-34
EggNOG OGs2CBDP@1|root,2SAUK@2759|Eukaryota
DescriptionCpeT/CpcT family (DUF1001)
Cds size1278
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.0406497-UTR-P-wetherbeei_contig65:4518..45571683186918.0406497-UTR-P-wetherbeei_contig65:4518..4557Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig65 4519..4557 -
1683186918.0630262-UTR-P-wetherbeei_contig65:5835..58531683186918.0630262-UTR-P-wetherbeei_contig65:5835..5853Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig65 5836..5853 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.0528016-CDS-P-wetherbeei_contig65:4557..58351683186918.0528016-CDS-P-wetherbeei_contig65:4557..5835Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig65 4558..5835 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig65.6.1prot_P-wetherbeei_contig65.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig65 4558..5835 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig65.6.1

>prot_P-wetherbeei_contig65.6.1 ID=prot_P-wetherbeei_contig65.6.1|Name=mRNA_P-wetherbeei_contig65.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=426bp
MRLFLWFLLAVDSLPLVVCFSTANPFGAAVGRHETRFERSSPLASSRQTA
APLFSSVKNGENDYVSELLRLFDGDFDNYDQVLQDRALGMTAGEGGGHEH
IHCRLRDVTTLAPKQIMRPAGTSAPYGDSANPKATVSATYYFNGDPNVVF
RFRLYTFENALPEAPRGAAVVMRLWRLLPAVEARLRANGYRLEKVDWDAL
DPDGTVAEEMRGCEIYWRPTVRPAFSGASASAASAAAAVQESGAATAAAT
RAGPGTGAVTAIADGPPLWEGLMGENDDGTWISSQVAPGFGILVKDDLGL
WSDVLCVNDRGFGRDGKFIYGNQRGVPYRMRRVTPGGSLVWTMGPEHRPA
ELFAQKMAAITTALPAGGGIAPPGRYSTAAAVPVAAKAPLFAARSPPPPP
STGIAPAAASRPSSLAGEAATCDDG*
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mRNA from alignment at P-wetherbeei_contig65:4519..5853-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig65.6.1 ID=mRNA_P-wetherbeei_contig65.6.1|Name=mRNA_P-wetherbeei_contig65.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1335bp|location=Sequence derived from alignment at P-wetherbeei_contig65:4519..5853- (Phaeothamnion wetherbeei SAG_119_79)
GTCGGGGAACCACCAGCCATGCGCCTTTTCCTGTGGTTCTTGCTTGCTGT TGACAGCCTGCCGCTAGTGGTATGCTTCTCGACCGCGAACCCGTTCGGCG CGGCGGTAGGACGCCACGAAACTAGGTTTGAGAGGTCCAGCCCTCTTGCG TCGTCGCGGCAGACTGCAGCGCCGCTCTTCTCGAGCGTTAAAAATGGCGA GAATGATTATGTTTCGGAGCTGCTGCGTCTTTTCGATGGCGATTTTGACA ACTATGACCAGGTGTTACAAGATCGTGCTCTTGGCATGACGGCCGGCGAA GGTGGCGGCCACGAGCACATTCACTGCCGATTGAGAGATGTTACAACTCT GGCCCCCAAGCAAATTATGCGGCCTGCAGGCACCAGCGCACCTTACGGCG ACTCTGCAAATCCAAAGGCGACTGTATCAGCAACTTACTACTTCAACGGT GACCCGAACGTGGTGTTCCGCTTCCGCCTGTACACGTTCGAGAATGCGCT GCCCGAGGCACCGCGAGGAGCAGCCGTCGTCATGCGGCTCTGGCGCCTCC TGCCCGCAGTCGAAGCTCGGCTCCGCGCCAATGGTTACCGCCTGGAAAAG GTCGACTGGGACGCATTGGACCCCGACGGGACCGTCGCGGAGGAGATGCG TGGCTGTGAAATTTACTGGCGCCCAACAGTCCGCCCAGCGTTTTCAGGTG CCTCAGCCTCTGCTGCTTCAGCTGCGGCGGCAGTGCAGGAGTCTGGAGCG GCAACAGCGGCGGCGACCAGAGCTGGGCCCGGGACAGGGGCTGTAACAGC AATCGCTGACGGGCCGCCGCTGTGGGAGGGCCTCATGGGGGAGAATGACG ATGGTACGTGGATCTCATCGCAGGTCGCACCGGGGTTTGGCATTCTCGTC AAAGATGACCTCGGCCTGTGGAGCGACGTGCTGTGCGTCAATGACCGCGG CTTCGGCCGCGACGGCAAGTTCATCTATGGCAACCAGCGCGGGGTGCCCT ACCGCATGCGCCGCGTCACGCCCGGTGGTTCGCTGGTGTGGACGATGGGG CCGGAACACCGCCCGGCGGAGCTCTTCGCGCAGAAGATGGCGGCCATTAC GACTGCTTTGCCCGCCGGCGGCGGCATTGCTCCCCCAGGGCGGTATTCGA CGGCGGCGGCGGTTCCGGTCGCAGCAAAGGCTCCGCTTTTCGCAGCACGG TCGCCGCCGCCGCCGCCGTCAACCGGTATTGCCCCGGCTGCCGCGTCTCG TCCTTCCTCCCTCGCCGGAGAAGCTGCAACCTGCGATGACGGGTAAAAGA CATTATTGGTCTTACCGCGTAAAGCAAAACGCCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig65:4519..5853-

>mRNA_P-wetherbeei_contig65.6.1 ID=mRNA_P-wetherbeei_contig65.6.1|Name=mRNA_P-wetherbeei_contig65.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1278bp|location=Sequence derived from alignment at P-wetherbeei_contig65:4519..5853- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCTTTTCCTGTGGTTCTTGCTTGCTGTTGACAGCCTGCCGCTAGT
GGTATGCTTCTCGACCGCGAACCCGTTCGGCGCGGCGGTAGGACGCCACG
AAACTAGGTTTGAGAGGTCCAGCCCTCTTGCGTCGTCGCGGCAGACTGCA
GCGCCGCTCTTCTCGAGCGTTAAAAATGGCGAGAATGATTATGTTTCGGA
GCTGCTGCGTCTTTTCGATGGCGATTTTGACAACTATGACCAGGTGTTAC
AAGATCGTGCTCTTGGCATGACGGCCGGCGAAGGTGGCGGCCACGAGCAC
ATTCACTGCCGATTGAGAGATGTTACAACTCTGGCCCCCAAGCAAATTAT
GCGGCCTGCAGGCACCAGCGCACCTTACGGCGACTCTGCAAATCCAAAGG
CGACTGTATCAGCAACTTACTACTTCAACGGTGACCCGAACGTGGTGTTC
CGCTTCCGCCTGTACACGTTCGAGAATGCGCTGCCCGAGGCACCGCGAGG
AGCAGCCGTCGTCATGCGGCTCTGGCGCCTCCTGCCCGCAGTCGAAGCTC
GGCTCCGCGCCAATGGTTACCGCCTGGAAAAGGTCGACTGGGACGCATTG
GACCCCGACGGGACCGTCGCGGAGGAGATGCGTGGCTGTGAAATTTACTG
GCGCCCAACAGTCCGCCCAGCGTTTTCAGGTGCCTCAGCCTCTGCTGCTT
CAGCTGCGGCGGCAGTGCAGGAGTCTGGAGCGGCAACAGCGGCGGCGACC
AGAGCTGGGCCCGGGACAGGGGCTGTAACAGCAATCGCTGACGGGCCGCC
GCTGTGGGAGGGCCTCATGGGGGAGAATGACGATGGTACGTGGATCTCAT
CGCAGGTCGCACCGGGGTTTGGCATTCTCGTCAAAGATGACCTCGGCCTG
TGGAGCGACGTGCTGTGCGTCAATGACCGCGGCTTCGGCCGCGACGGCAA
GTTCATCTATGGCAACCAGCGCGGGGTGCCCTACCGCATGCGCCGCGTCA
CGCCCGGTGGTTCGCTGGTGTGGACGATGGGGCCGGAACACCGCCCGGCG
GAGCTCTTCGCGCAGAAGATGGCGGCCATTACGACTGCTTTGCCCGCCGG
CGGCGGCATTGCTCCCCCAGGGCGGTATTCGACGGCGGCGGCGGTTCCGG
TCGCAGCAAAGGCTCCGCTTTTCGCAGCACGGTCGCCGCCGCCGCCGCCG
TCAACCGGTATTGCCCCGGCTGCCGCGTCTCGTCCTTCCTCCCTCGCCGG
AGAAGCTGCAACCTGCGATGACGGGTAA
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