mRNA_P-wetherbeei_contig65.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: D8LBC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBC5_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 6.220e-21 Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 22 GLIRWEQARARWTSGGSRDAP---RRRAKSMDVDQVIDTIFSGTSD-GTLPSPVTLPQMVDLLVDLWEAEGLFD 231
GL+RWE+ R W +GG+ R RA++MDVD+VID +FSG G LP V LPQM+DLLVDLWEAEGLFD
Sbjct: 27 GLLRWERERKAWLAGGTGGPVGRRRARARTMDVDEVIDDLFSGRGGTGNLPQSVPLPQMIDLLVDLWEAEGLFD 100
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A4D9DFS2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFS2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 6.790e-17 Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 22 GLIRWEQARARWTS-------GGSRDAPR-------RRAKSMDVDQVIDTIFSGTSDGTLPSPVTLPQMVDLLVDLWEAEGLFD 231
GL W + R W S GG+R P +RA+S+DVD VI++IFS T D LP PV L QM+DLLVD WEA+GL+D
Sbjct: 52 GLKLWSERRREWQSKNNQSEGGGTRSEPPPARSQLPKRARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD 135
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A835Z3H3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3H3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 9.000e-17 Identity = 39/81 (48.15%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 22 GLIRWEQARARWTSGGSRDAPR-----------RRAKSMDVDQVIDTIFSGTSDGTLPSPVTLPQMVDLLVDLWEAEGLFD 231
GL RWE R RW G R+A+++D D +IDTIF G +G LP PV LPQM++LLVDLWE EGL+D
Sbjct: 97 GLRRWEAERQRWVQKGXXXXXXXXXXXXXXXXXRKAQTVDTDAIIDTIFVGKGNGVLPRPVMLPQMINLLVDLWETEGLYD 177
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A7S2E517_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E517_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 9.630e-15 Identity = 43/102 (42.16%), Postives = 51/102 (50.00%), Query Frame = 1
Query: 16 DIGLIRWEQARARWTSGGSRDAP----------RRRAKSMDVDQVIDTIFSGT----------------------SDGTLPSPVTLPQMVDLLVDLWEAEGL 225
++GL RWE RARW S S D +R A +DVD+VID +FS DG+ P PV LPQMVD+LVDLWEAEGL
Sbjct: 51 NVGLQRWEVERARWLSSASLDETHPTNKSVQQQQRHAIELDVDEVIDCVFSNRWRQTAQQLPSGGRGGRGFHQKIDDGSFPCPVPLPQMVDILVDLWEAEGL 152
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A7S1D623_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D623_CYCTE) HSP 1 Score: 73.2 bits (178), Expect = 2.440e-14 Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 22 GLIRWEQARARWTSGGSRDAPRRRAKSMDVDQVIDTIFSG---TSDG---TLPSPVTLPQMVDLLVDLWEAEGL 225
GL+RWE++RA W + D+ + A +DVD +ID IFS +G + P PV L QMVD+LVDLWEAEGL
Sbjct: 107 GLLRWEESRATWLKSDTSDSTAKAAIPLDVDAIIDLIFSQRWRNQEGEASSFPQPVPLTQMVDILVDLWEAEGL 180
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: W7U1W8_9STRA (DUF4050 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1W8_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.150e-14 Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 91 RAKSMDVDQVIDTIFSGTSDGTLPSPVTLPQMVDLLVDLWEAEGLFD 231
RA+S+DVD VI++IFS T D LP PV L QM+DLLVD WEA+GL+D
Sbjct: 67 RARSVDVDHVIESIFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD 113
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A7S1E125_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E125_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.610e-13 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 22 GLIRWEQARARWTSGG--SRDAPRRRAKSMDVDQVIDTIFS------GTSDGTLPSPVTLPQMVDLLVDLWEAEGL 225
G ++WE++R +W S S + AK++DVD++ID IFS P V LPQMVD+LVDLWEAEGL
Sbjct: 39 GFLKWEESRNKWISSTQESNSKTKTGAKALDVDEIIDLIFSQRWRSQSPERNQFPEAVPLPQMVDILVDLWEAEGL 114
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A7S2XR72_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XR72_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 7.350e-12 Identity = 40/97 (41.24%), Postives = 49/97 (50.52%), Query Frame = 1
Query: 16 DIGLIRWEQARARWT-----SGGSRD-----APRRRAKSMDVDQVIDTIFSG-----------------TSDGTLPSPVTLPQMVDLLVDLWEAEGL 225
+ GL+ WE+ R W S G D R A ++DVD++ID IFS T+ GT PV LPQMVD+LVDLWEAEGL
Sbjct: 28 NTGLLHWEKGRKHWLRKKAGSVGEEDKKEEEGEERAAINIDVDEIIDIIFSNRWRVTSPSNSLPGKTTETARGTFAHPVPLPQMVDILVDLWEAEGL 124
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: B7FW96_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW96_PHATC) HSP 1 Score: 65.5 bits (158), Expect = 3.180e-11 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 16 DIGLIRWEQARARWTSGGSRDAPR--RRAKSMDVDQVIDTIFSG-------TSDGTLPSPVTLPQMVDLLVDLWEAEGL 225
+ GL WE++RA W + +RD R AK ++VD++ID IF+ T P+PV LPQM+D+L DLWEAEGL
Sbjct: 124 NYGLEFWEKSRATWLAT-NRDETRISPHAKPLEVDEIIDAIFAAPRQWRETTGPTRFPTPVPLPQMIDILQDLWEAEGL 201
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Match: A0A6S8ZSI1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZSI1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.530e-10 Identity = 40/104 (38.46%), Postives = 50/104 (48.08%), Query Frame = 1
Query: 16 DIGLIRWEQARARWTSGGS-RDAP-----------RRRAKSMDVDQVIDTIFSGT----------------------SDGTLPSPVTLPQMVDLLVDLWEAEGL 225
++GL RWE R +W S + DA +R A +DVD+VID +FS DG+ P PV L QMVD+LVDLWEAEGL
Sbjct: 69 NVGLQRWEVVRDQWLSTSTTHDATTEKNHSIYKKMQRHAVELDVDEVIDCVFSNRWRQTAQTSPSGKSSGKGIHQKIDDGSFPCPVPLSQMVDILVDLWEAEGL 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig65.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig65.1.1 >prot_P-wetherbeei_contig65.1.1 ID=prot_P-wetherbeei_contig65.1.1|Name=mRNA_P-wetherbeei_contig65.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp RPPPPDIGLIRWEQARARWTSGGSRDAPRRRAKSMDVDQVIDTIFSGTSDback to top mRNA from alignment at P-wetherbeei_contig65:70..303+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig65.1.1 ID=mRNA_P-wetherbeei_contig65.1.1|Name=mRNA_P-wetherbeei_contig65.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig65:70..303+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig65:70..303+ >mRNA_P-wetherbeei_contig65.1.1 ID=mRNA_P-wetherbeei_contig65.1.1|Name=mRNA_P-wetherbeei_contig65.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig65:70..303+ (Phaeothamnion wetherbeei SAG_119_79)back to top |