mRNA_P-wetherbeei_contig6497.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI) HSP 1 Score: 100 bits (249), Expect = 1.250e-19 Identity = 51/131 (38.93%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 178 LSRLRDICDRIKAQSQAPDPQLCTTLVTLAETQPEALRDPAALRVICEILKDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAWKLP 570
+ ++ + ++K + PD LC+ L +AE +P+ R+P L + E+L G K Q G + P A AA A + AAL+ + EWP+ALL++YM DALGGRQW H C+ FV+N++TAW P
Sbjct: 51 VDTIKGLLQQVKENIKNPDRSLCSDLQRMAELRPKVFREPELLESVGEVLTGKGAKTAIQSSGG----REAPCVAQAAACAMLTAALKALPEWPIALLDIYMHDALGGRQWASHSACKPFVDNVRTAWAPP 177
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.880e-19 Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 208 IKAQSQAPDPQLCTTLVTLAETQPEALRDPAALRVICEILKDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAWKLP 570
+ A Q PD LC+ L +AE +P+ R+P L + E+L G K +Q + GQ+ P A AA A + AAL+ + EWP+ALL++YM DALGGRQW H C+ FV+N++TAW P
Sbjct: 20 VPANIQNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKT--AIQSSGGQEA--PCVAQAAACAMLTAALKALPEWPIALLDIYMHDALGGRQWASHSACKPFVDNVRTAWAPP 136
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: UPI0010BD8DB9 (integrator complex subunit 1 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD8DB9) HSP 1 Score: 67.8 bits (164), Expect = 1.050e-8 Identity = 42/126 (33.33%), Postives = 63/126 (50.00%), Query Frame = 1
Query: 196 ICDRIKA---QSQAPDPQLCTTLVTLAETQPEALRDPAALRVICEILKDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAWK 564
+C +K Q PD L +L+ LA+T+P + L C +LK K L G+ + + AA ++A + V WP + VY+ D+LG R WVDH +CR FVEN+ TA++
Sbjct: 128 LCGAVKLLRMQKPKPDAVLYLSLMFLAKTRPAIFQSEVVLEAFCHLLK----KETPPLPTIKGKSANA---VSILAANLLLAVFQDVENWPEIFVRVYVDDSLGDRLWVDHEECRCFVENILTAFR 246
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A8J5JZP3_HOMAM (Integrator complex subunit 1-like n=3 Tax=Astacidea TaxID=6712 RepID=A0A8J5JZP3_HOMAM) HSP 1 Score: 66.2 bits (160), Expect = 3.350e-8 Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 1
Query: 172 STLSRLRDICDRIKAQSQAPDPQLCTTLVTLAETQPEAL-RDPAALRVICEILKDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVV-AALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAW--KLPETAIPLPPL 597
ST L +++Q PD LC +L+ L + +P R + C +LK R H + K + A + AA ++ AA + + WP + VYM D+LG R WVDH DC+ FV+N+ TA+ KLP ++ P L
Sbjct: 128 STEMYLCGAVKSLRSQRTKPDNLLCFSLMYLVKVKPHLFSRSKMVVEAFCSLLK-----RDHSMT-----YKSKGNAAVSVLAANILLAAFQEEKSWPQIFVRVYMEDSLGERVWVDHEDCKGFVDNIATAFRTKLPPKSLLYPDL 263
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A553N6T5_TIGCA (DUF3677 domain-containing protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N6T5_TIGCA) HSP 1 Score: 63.9 bits (154), Expect = 1.880e-7 Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 205 RIKAQSQAPDPQLCTTLVTLAETQPEALRDPAAL-RVICEILK-DSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAW--KLPETAIPLPP 594
+++ Q PD L +L+ LA+ QPE L +C +LK D + K + G AA ++AA + R WP + V++ DA+G R WVDHPDC+ FV+N+ TA +LP ++ L P
Sbjct: 22 QLRVQRAKPDQVLYLSLLYLAKHQPELFSGSDHLVEALCSLLKRDVKESYKSKGNALVG----------VLAANVLLAAFQKERNWPEIFVRVFIDDAMGERIWVDHPDCKGFVDNVMTALGTRLPPHSVFLKP 145
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A0P4W537_SCYOL (DUF3677 domain-containing protein n=3 Tax=Portunidae TaxID=6757 RepID=A0A0P4W537_SCYOL) HSP 1 Score: 63.9 bits (154), Expect = 1.890e-7 Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 1
Query: 196 ICDRIK---AQSQAPDPQLCTTLVTLAETQPEAL-RDPAALRVICEILKDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVV-AALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAWK 564
+C +K + PD LC +L+ LA+ +P + + C +LK R H + K + A + AA ++ AA + R WP + VY+ D+LG R WVDH DCR FV+N+ TA+K
Sbjct: 131 LCGAVKTLRSHRTKPDNLLCFSLMYLAKVKPHLFSKSEMVVEAFCSLLK-----RDHSMT-----YKSKGNAAVSVLAANILLAAFQDERAWPDIFVRVYIEDSLGERLWVDHDDCRGFVDNIATAFK 248
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A7M7MJP7_VARDE (DUF3677 domain-containing protein n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7MJP7_VARDE) HSP 1 Score: 63.9 bits (154), Expect = 1.890e-7 Identity = 38/127 (29.92%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 196 ICDRIK---AQSQAPDPQLCTTLVTLAETQPEALRDPAALRVICEIL-KDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAWK 564
+C +K +Q PD L +L+ LA+T+P+A ++ + C +L K++ + +G + A AA ++A + +WP A + ++ D+LG R WVDH +C+ FV+N+ TA+K
Sbjct: 132 LCGAVKLLRSQRPKPDAVLYLSLMFLAKTRPQAFQNDTVIEAFCHLLRKETPPSPALKGKGASA--------VAILAANLLLAVFQDSDQWPDAFVRAFVEDSLGDRLWVDHEECKCFVDNILTAFK 250
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A3R7PEN4_PENVA (Integrator complex subunit 1 n=7 Tax=Penaeus TaxID=133894 RepID=A0A3R7PEN4_PENVA) HSP 1 Score: 63.5 bits (153), Expect = 2.500e-7 Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 1
Query: 196 ICDRIK---AQSQAPDPQLCTTLVTLAETQPEAL-RDPAALRVICEILKDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVV-AALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAW--KLPETAIPLPPL 597
+C +K AQ PD LC +L+ LA+ +P R C +LK R H + K + A + AA ++ AA + + WP + VY+ D+LG R WVDH DC+ FV+N+ TA+ K+P ++ P L
Sbjct: 133 LCGAVKTLRAQRTKPDNLLCFSLMYLAKVKPHLFSRSEMVTEAFCSLLK-----RDHSMT-----YKGKGNAAISVLAANILLAAYQDEKSWPDIFVRVYIEDSLGERIWVDHEDCKGFVDNIATAFRTKMPPKSLLYPDL 263
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A1V9XCV1_9ACAR (Integrator complex subunit 1-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XCV1_9ACAR) HSP 1 Score: 62.4 bits (150), Expect = 5.950e-7 Identity = 41/140 (29.29%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 196 ICDRIKA---QSQAPDPQLCTTLVTLAETQPEALRDPAALRVICEIL-KDSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAWK--LPETAIPLPPL 597
+C +K Q PD L +L+ LA+T+P++ ++ + C +L K++ +++G + A AA ++A + +WP A + V++ D+L R WVDH +C+ FV+N+ TA+K LP ++ P L
Sbjct: 91 LCGAVKLLRMQRPKPDAVLYLSLMFLAKTRPQSFQNDVVVEAFCHLLRKETPPPPALKVKGASA--------VAILAANLLLAVYQDSDQWPEAFVRVFVDDSLAERLWVDHEECKCFVDNILTAFKTRLPPKSMMAPEL 222
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Match: A0A6J1W1P2_9SAUR (integrator complex subunit 1-like n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1W1P2_9SAUR) HSP 1 Score: 61.2 bits (147), Expect = 7.410e-7 Identity = 41/129 (31.78%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 205 RIKAQSQAPDPQLCTTLVTLAETQPEALRDPAALRVICEILK-DSGDKRKHQLQGTTGQQKHEPRPAATAAAAAVVAALRGVREWPLALLEVYMSDALGGRQWVDHPDCRTFVENLQTAW--KLPETAI 582
++K PD L TL+ LA+ +P + +C +L+ D+ K + A ++AA WP ++VYM D+LG R WVD P C+TFVEN+QTA+ K+P +I
Sbjct: 146 QLKMNRAKPDITLYLTLMYLAKIKPNIFATEGVIEALCSLLRRDASINFKAKGNSLVS----------VLACNLLMAAYEEDENWPEIFVKVYMEDSLGERIWVDSPHCKTFVENIQTAFGTKMPPKSI 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6497.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6497.1.1 >prot_P-wetherbeei_contig6497.1.1 ID=prot_P-wetherbeei_contig6497.1.1|Name=mRNA_P-wetherbeei_contig6497.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp SGCNEVKERKGKGNGEIRRNMKLSTRRGSKRPRDEALPSSPRPDSSPHGLback to top mRNA from alignment at P-wetherbeei_contig6497:394..1648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6497.1.1 ID=mRNA_P-wetherbeei_contig6497.1.1|Name=mRNA_P-wetherbeei_contig6497.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1255bp|location=Sequence derived from alignment at P-wetherbeei_contig6497:394..1648+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6497:394..1648+ >mRNA_P-wetherbeei_contig6497.1.1 ID=mRNA_P-wetherbeei_contig6497.1.1|Name=mRNA_P-wetherbeei_contig6497.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig6497:394..1648+ (Phaeothamnion wetherbeei SAG_119_79)back to top |