mRNA_P-wetherbeei_contig6496.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6496.1.1
Unique NamemRNA_P-wetherbeei_contig6496.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: D7FM01_ECTSI (Sedoheptulose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM01_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 7.820e-64
Identity = 96/131 (73.28%), Postives = 110/131 (83.97%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            ++FAPGNLRAT+D P YK LFDHWV  RYTLRYTGGMVPDV H+ IK KG+FSNVSS  AKAKLRLLYECAP+ALL+EAAGGASV+AP  G  +G  P+SVLD+ IDNLD+RLG+C GG  EVD+F RFMF
Sbjct:  160 KVFAPGNLRATADQPAYKRLFDHWVDNRYTLRYTGGMVPDVYHILIKNKGVFSNVSSAAAKAKLRLLYECAPIALLIEAAGGASVMAPSPGAASGGTPLSVLDVEIDNLDKRLGLCLGGKEEVDVFNRFMF 290          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A7S3US16_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US16_HETAK)

HSP 1 Score: 184 bits (467), Expect = 1.120e-57
Identity = 92/137 (67.15%), Postives = 107/137 (78.10%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAP------DVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            + FAPGNLRATSDNPRY  L  HW+ ERYTLRYTGG+VPD+ H+  KGKG+F+NVSSP+A AKLRLLYECAP+ALLVEAAGGAS +AP      D G  AG +  SVLD  + +LDRR+GVCYGG  EV  F+RFMF
Sbjct:    3 RTFAPGNLRATSDNPRYSQLVQHWIKERYTLRYTGGLVPDIYHILTKGKGVFANVSSPSAIAKLRLLYECAPIALLVEAAGGASCLAPPPDYNPDEGPGAGVS--SVLDAAVSDLDRRVGVCYGGAEEVAAFRRFMF 137          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A835YXX8_9STRA (Sedoheptulose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.920e-57
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGE---------APMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            ++FAPGNLRATSD+P+YKALFDHWV +RYTLRYTGGMVPDV +  +KGKG+F+NV SP+A AKLRLLYECAP+ALLVEAAGG SVVAP  G              AP SVLD++ D +D RLGVCYGG  EV  F RFMF
Sbjct:  200 KVFAPGNLRATSDHPQYKALFDHWVGQRYTLRYTGGMVPDVYYSLVKGKGVFANVPSPSAPAKLRLLYECAPIALLVEAAGGRSVVAPAPGXXXXXXXXXXXXXXAPQSVLDVVADGMDVRLGVCYGGVDEVATFNRFMF 339          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A7S2UUN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUN7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.520e-52
Identity = 88/144 (61.11%), Postives = 107/144 (74.31%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGE-------------APMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            + FAPGNLRATSD P+Y+ L D W+ ERYTLRY+GG+VPDV H+FIK KGI +NVSS TA+AKLRLLYECAP+ LLVEAAGGA+ + P       E              P+S+LD+ IDNLD+R+GVCYG T EVDI+KRF+F
Sbjct:  210 KTFAPGNLRATSDFPKYRELVDFWIKERYTLRYSGGLVPDVYHIFIKSKGILTNVSSATAQAKLRLLYECAPVGLLVEAAGGATCIQPPFPPLPSEDXXXXXXXXXXPITPISILDVPIDNLDKRVGVCYGSTEEVDIYKRFLF 353          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A8J1ZBM4_9DINO (Fructose-bisphosphatase n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZBM4_9DINO)

HSP 1 Score: 167 bits (422), Expect = 1.520e-48
Identity = 80/131 (61.07%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            ++FAPGNLRAT+D P Y AL   W+ +RYTLRYTGGMVPDV H+  KGKG+FSN SS  AKAKLRLLYECAP+A +VEAAGG S+V P        AP SVLD+ +  LD+R+GV YG +AE+++F+  MF
Sbjct:  191 KVFAPGNLRATADAPAYMALVQEWIAQRYTLRYTGGMVPDVYHILFKGKGVFSNCSSAGAKAKLRLLYECAPIAFIVEAAGGKSLVDPMFAS----APQSVLDVAVAALDQRIGVAYGSSAEIELFQTHMF 317          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A8J1VZP9_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1VZP9_9DINO)

HSP 1 Score: 166 bits (420), Expect = 3.120e-48
Identity = 80/131 (61.07%), Postives = 97/131 (74.05%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            ++FAPGNLRAT+DN  Y  L  HW+ E+YTLRYTGGMVPDV H+  KGKGIF+N SSP AKAKLRLLYECAP+A LVE AGGAS+V P         P SVL++    LD+R+GV YGG  EVD+ ++ +F
Sbjct:  193 KVFAPGNLRATADNALYSNLVQHWIKEKYTLRYTGGMVPDVYHILFKGKGIFTNCSSPGAKAKLRLLYECAPIAFLVERAGGASLVDPAFSA----VPQSVLEIAAQELDQRIGVVYGGKEEVDLCQKHLF 319          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: B8BY12_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY12_THAPS)

HSP 1 Score: 165 bits (417), Expect = 3.070e-47
Identity = 80/131 (61.07%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            ++FAPGNLRAT+DNP+Y AL  HW+++RYTLRYTGGMVPDV HMF K  G+FSNVSS  A+AKLRLLYE A + LLVE AGG +    +         +SVLDL +D+LDRRLGVC+G   EV ++K+FMF
Sbjct:  251 KVFAPGNLRATNDNPKYDALVKHWISDRYTLRYTGGMVPDVYHMFAKSGGVFSNVSSDKARAKLRLLYEVAAMGLLVECAGGVTTHESE--------DISVLDLEVDDLDRRLGVCFGSKDEVALYKKFMF 373          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: K8YYP4_NANGC (Sedoheptulose-bisphosphatase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YYP4_NANGC)

HSP 1 Score: 162 bits (410), Expect = 1.200e-46
Identity = 83/133 (62.41%), Postives = 99/133 (74.44%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGE--APMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            +IFAPGNLRAT+DN  YK L D W+ ERYTLRYTGG+VPDV H+ IKGKG+ +NV S  AKAKLRLLYE AP+AL++E AG AS  AP   GP GE   P+S+LDL I  L+ + GV YGG  EV IFK+ M+
Sbjct:  198 KIFAPGNLRATADNAAYKQLVDFWIAERYTLRYTGGLVPDVYHVLIKGKGVVTNVVSAAAKAKLRLLYEAAPIALVMECAGAASCTAP---GPNGEHPEPISILDLPIMGLEFKCGVAYGGVEEVAIFKKLMY 327          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A7R9VKH4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKH4_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.490e-46
Identity = 80/130 (61.54%), Postives = 98/130 (75.38%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFM 390
            ++FAPGNLRA++DN +Y AL +HW+ ERYTLRY+GGMVPDV HMF K KG+FSNVSS  A+AKLRLLYE AP+ L+VE AGG +      G        SVLD +ID+LDRRLGVC+G   EV+ +KRFM
Sbjct:  245 KVFAPGNLRASNDNAKYAALINHWIEERYTLRYSGGMVPDVYHMFAKSKGVFSNVSSEKARAKLRLLYEVAPIGLIVECAGGMTTHEAHDG--------SVLDEVIDDLDRRLGVCFGSREEVEKYKRFM 366          
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Match: A0A482S7V3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7V3_9ARCH)

HSP 1 Score: 160 bits (406), Expect = 3.920e-46
Identity = 78/131 (59.54%), Postives = 98/131 (74.81%), Query Frame = 1
Query:    1 QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKGIFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMSVLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF 393
            + FAPGNLRAT+DNPRY+ L   W+  +YTLRY+GG+VPDV H+FIK  GI SN SS  AKAKLRLLYECAP+AL+VEAAGG S V         E P+S+LD+ + +LD+R+GVCYG   EV+ FK ++F
Sbjct:  191 KTFAPGNLRATADNPRYRDLVSFWIDNKYTLRYSGGLVPDVYHIFIKQGGILSNASSKAAKAKLRLLYECAPIALIVEAAGGMSCVCSSEANEHCE-PVSLLDVAVTDLDKRVGVCYGSKEEVERFKSYIF 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6496.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM01_ECTSI7.820e-6473.28Sedoheptulose-bisphosphatase n=2 Tax=Ectocarpus Ta... [more]
A0A7S3US16_HETAK1.120e-5767.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YXX8_9STRA4.920e-5767.14Sedoheptulose-bisphosphatase n=1 Tax=Tribonema min... [more]
A0A7S2UUN7_9STRA1.520e-5261.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J1ZBM4_9DINO1.520e-4861.07Fructose-bisphosphatase n=1 Tax=Amoebophrya sp. A2... [more]
A0A8J1VZP9_9DINO3.120e-4861.07Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
B8BY12_THAPS3.070e-4761.07Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K8YYP4_NANGC1.200e-4662.41Sedoheptulose-bisphosphatase n=3 Tax=Monodopsidace... [more]
A0A7R9VKH4_9STRA1.490e-4661.54Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A482S7V3_9ARCH3.920e-4659.54Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6496contigP-wetherbeei_contig6496:29..721 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog35128.Thaps261823
PFAMsFBPase
Model size396
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00017
KEGG koko:K01100
KEGG ReactionR01845
KEGG Pathwayko00710,ko01100,ko01120,ko01200,map00710,map01100,map01120,map01200
KEGG ModuleM00165,M00167
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.68e-49
EggNOG OGsCOG0158@1|root,KOG1458@2759|Eukaryota,2XCFQ@2836|Bacillariophyta
EC3.1.3.37
DescriptionFructose-1-6-bisphosphatase, N-terminal domain
Cds size396
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186917.6296542-CDS-P-wetherbeei_contig6496:28..2791683186917.6296542-CDS-P-wetherbeei_contig6496:28..279Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6496 29..279 +
1683186917.6420717-CDS-P-wetherbeei_contig6496:576..7211683186917.6420717-CDS-P-wetherbeei_contig6496:576..721Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6496 577..721 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6496.1.1prot_P-wetherbeei_contig6496.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6496 29..721 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6496.1.1

>prot_P-wetherbeei_contig6496.1.1 ID=prot_P-wetherbeei_contig6496.1.1|Name=mRNA_P-wetherbeei_contig6496.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp
QIFAPGNLRATSDNPRYKALFDHWVTERYTLRYTGGMVPDVVHMFIKGKG
IFSNVSSPTAKAKLRLLYECAPLALLVEAAGGASVVAPDVGGPAGEAPMS
VLDLLIDNLDRRLGVCYGGTAEVDIFKRFMF*
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mRNA from alignment at P-wetherbeei_contig6496:29..721+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6496.1.1 ID=mRNA_P-wetherbeei_contig6496.1.1|Name=mRNA_P-wetherbeei_contig6496.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig6496:29..721+ (Phaeothamnion wetherbeei SAG_119_79)
CAGATATTCGCGCCGGGAAACCTGCGCGCCACGTCGGACAACCCGCGCTA CAAGGCGCTCTTCGACCACTGGGTCACCGAGCGCTACACGCTCCGCTACA CGGGCGGCATGGTGCCGGACGTGGTGCACATGTTCATCAAAGGGAAGGGA ATATTCAGCAACGTGTCGTCGCCGACGGCTAAGGCCAAGCTGCGGCTACT GTACGAATGCGCCCCGCTGGCGCTGCTCGTCGAGGCGGCCGGCGGCGCCA GGTCAGTCTCATCCTTGACGGCCTACGGATGCCGGGCTCAGTCAGTTGGT TGGGTCAGGTCAAATATGTCTCGAGTCATCCTGTTGCCGCTGCGTTGAGG GTTGATGCCGGCCTTGGGAAGGAGAGGATCTTCGATGCGGCAGGCAGCGC ACGAGTGTGCTTCAGAACCAGCGTTACTGAAGCAGAATTGGGATATTTTC GCCATATCGAAAGCCAATCTTCTTTCTCGTCCCTCATCACTCCCGGCTGG CGCCACAATACCCACGCTCTCCCCCGCCTCTTGAAAATCCCGCCGCAGCG TCGTTGCGCCGGACGTTGGCGGACCTGCTGGGGAGGCGCCGATGTCGGTG CTCGATCTGCTCATCGACAACCTCGACCGCCGGTTGGGAGTCTGCTACGG CGGCACCGCGGAGGTGGACATCTTCAAGCGGTTCATGTTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6496:29..721+

>mRNA_P-wetherbeei_contig6496.1.1 ID=mRNA_P-wetherbeei_contig6496.1.1|Name=mRNA_P-wetherbeei_contig6496.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig6496:29..721+ (Phaeothamnion wetherbeei SAG_119_79)
CAGATATTCGCGCCGGGAAACCTGCGCGCCACGTCGGACAACCCGCGCTA
CAAGGCGCTCTTCGACCACTGGGTCACCGAGCGCTACACGCTCCGCTACA
CGGGCGGCATGGTGCCGGACGTGGTGCACATGTTCATCAAAGGGAAGGGA
ATATTCAGCAACGTGTCGTCGCCGACGGCTAAGGCCAAGCTGCGGCTACT
GTACGAATGCGCCCCGCTGGCGCTGCTCGTCGAGGCGGCCGGCGGCGCCA
GCGTCGTTGCGCCGGACGTTGGCGGACCTGCTGGGGAGGCGCCGATGTCG
GTGCTCGATCTGCTCATCGACAACCTCGACCGCCGGTTGGGAGTCTGCTA
CGGCGGCACCGCGGAGGTGGACATCTTCAAGCGGTTCATGTTCTGA
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