mRNA_P-wetherbeei_contig648.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.510e-16 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 2
Query: 617 YLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLN 892
YLA+ + D +DF+LL FW +G+ + T V + AE PYL+ +A L+L +E TSCQ+ERNFSALAH++ D R + V +L+RLN
Sbjct: 129 YLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 4.220e-16 Identity = 59/159 (37.11%), Postives = 87/159 (54.72%), Query Frame = 2
Query: 503 KVELSLMEKRRLERVKVV---------MEERQQKEASGAAVASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVK--DVLAVKARRA 946
K +LS +E+RR RV +E++ + EV YLA+ + D + F++L +W +G+ + T V + AE PYL+ +A LYL +E TSCQ+ERNFSALAH++ LR + P V + +RLNR V V+ D VKA+ A
Sbjct: 469 KKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAA 627
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 5.590e-16 Identity = 59/159 (37.11%), Postives = 87/159 (54.72%), Query Frame = 2
Query: 503 KVELSLMEKRRLERVKVV---------MEERQQKEASGAAVASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVK--DVLAVKARRA 946
K +LS +E+RR RV +E++ + EV YLA+ + D + F++L +W +G+ + T V + AE PYL+ +A LYL +E TSCQ+ERNFSALAH++ LR + P V + +RLNR V V+ D VKA+ A
Sbjct: 664 KKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLVAEVRELDAAVVKAKAA 822
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 6.660e-16 Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 2
Query: 596 VASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVKDVLAVKARRAANAACVIQQVATAHAKR*ENRKNKGV 1024
+ EV YLA+ + + +DF++L FW +G+ + T V + AE PYL+ +A L+L +E +SCQ+ERNFSAL+H++ LR + V +L+RLNR V V+++ A + A AA Q+ E R NK +
Sbjct: 127 IEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQ----EERANKSI 265
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 6.720e-16 Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 2
Query: 596 VASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVKDVLAVKARRAANAACVIQQVATAHAKR 997
+ EV YLA+ + D + F+L+ FW +G+ + P T V A AE PYL+ +A L+L +E TSCQ+ERNFSALAH++ LR + V +L+RLNR + V+ + A A+ A AA ++ A A R
Sbjct: 387 IEREVLVYLAEQPQVDVDGFNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLLAEVRALDAAVAQARAMAAKSARESGIAQADR 520
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 5.130e-15 Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query: 617 YLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVK 916
YLA+ + D + F+L+ FW +G+ + T V + A+ PYL+ +A L+L +E TSCQ+ERNFSALAH++ +LR + P V +L+RLNR + V+
Sbjct: 408 YLAEQPQLDVDGFNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRMLDEVR 507
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 6.810e-15 Identity = 51/127 (40.16%), Postives = 75/127 (59.06%), Query Frame = 2
Query: 617 YLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVKDVLAVKARRAANAACVIQQVATAHAKR 997
YLA+ + D +DF+LL FW +G+ + T V + AE PYL+ +A L+L +E TSCQ+ERNFSALAH++ DL + V +L+RLN+ + V+ A A A AA ++ A A +R
Sbjct: 512 YLAEQPQVDVDDFNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLLAEVRAYDAAVAWARAMAANSAEKSAVAQEER 638
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 1.530e-14 Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 2
Query: 596 VASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLNREHVKGVKDVLAVKARRAANAACVIQQVATAHAKR*ENRKNKGV 1024
+ EV YLA+ + + +DF++L FW +G+ + T V + AE PYL+ +A L+L +E +SCQ+ERNFSAL+H++ LR + V +L+RLNR V V+++ A + A AA Q+ E R NK +
Sbjct: 692 IEREVLVYLAETEQVEVDDFNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLVDEVRELDAAVSLARAKAAKSAQKSVACQ----EERANKSI 830
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 1.410e-13 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 2
Query: 596 VASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLN 892
V EV+ Y P +D+ +L FW++ GS ++DP VV+ A+FP LS LA +YL ++ TSCQSER FS L + ++LR + P V M + LR N
Sbjct: 156 VQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGN-VVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSN 253
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 2.490e-13 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 2
Query: 596 VASEVERYLAQPLESDTEDFSLLTFWKEKGSAKIDPKTQGVVAVAEFPYLSRLAALYLSVEGTSCQSERNFSALAHMLSDLRSRLSPFTVSMCVLLRLN 892
V EV+ Y P +D+ +L FW++ GS ++DP VV+ A+FP LS LA +YL ++ TSCQSER FS L + ++LR + P V M + LR N
Sbjct: 158 VQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGN-VVSAAQFPILSMLARVYLCIDSTSCQSEREFSGLGFVYNNLRQAMVPDRVEMVMFLRSN 255 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig648.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig648.3.1 >prot_P-wetherbeei_contig648.3.1 ID=prot_P-wetherbeei_contig648.3.1|Name=mRNA_P-wetherbeei_contig648.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp MSTTRSMATPYARRPRSCSSTWRSTKKSRYAKVELSLMEKRRLERVKVVMback to top mRNA from alignment at P-wetherbeei_contig648:1177..3785- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig648.3.1 ID=mRNA_P-wetherbeei_contig648.3.1|Name=mRNA_P-wetherbeei_contig648.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2609bp|location=Sequence derived from alignment at P-wetherbeei_contig648:1177..3785- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig648:1177..3785- >mRNA_P-wetherbeei_contig648.3.1 ID=mRNA_P-wetherbeei_contig648.3.1|Name=mRNA_P-wetherbeei_contig648.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig648:1177..3785- (Phaeothamnion wetherbeei SAG_119_79)back to top |