mRNA_P-wetherbeei_contig6477.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A6H5JG07_9PHAE (Rubredoxin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JG07_9PHAE) HSP 1 Score: 149 bits (377), Expect = 5.200e-43 Identity = 77/127 (60.63%), Postives = 92/127 (72.44%), Query Frame = 1
Query: 1 KVMSPAEAERAAKLAEVERLRAAEKFIVKSTGEYECTQCSFVY-------AANQPRPFDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
K ++ AE + AK+ E+ERLRA EKF TG++EC QC FVY A FDDLPSTW CPVC++PKDTF A+T TIAGFE+N +YG G NQMTG QKNLLIFG L AFF+LF+AGYAL+
Sbjct: 104 KPLTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGFGANQMTGSQKNLLIFGGLFAFFVLFLAGYALD 230
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A6S9ELN9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ELN9_HETAK) HSP 1 Score: 132 bits (332), Expect = 1.670e-36 Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 31 AAKLAEVERLRAAEKFIVKSTGEYECTQCSFVYAANQPR-------PFDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
A K AE++RLR AEKFI K TGE++C+QC++VY ++ F DLP+ ++CP C +PK F+A TVTIAGFE+NQ YG GTN MTG QKN LIFG LA FF LF++GY L+
Sbjct: 90 AEKQAEIQRLRDAEKFITKMTGEFQCSQCNYVYKPDEGERNILPGTSFADLPTGYQCPECGAPKSFFDALTVTIAGFEDNQGYGFGTNSMTGDQKNTLIFGGLAFFFALFLSGYLLD 206
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A7S0GMA1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GMA1_9EUKA) HSP 1 Score: 132 bits (331), Expect = 5.020e-36 Identity = 66/121 (54.55%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 25 ERAAKLAEVERLRAAEKFIVKSTGEYECTQCSFVYAANQPRP---------FDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
E+ AK E+ RLRAAEKF K TG++EC +C FVY A P F+DLP W CPVC PKDTFE + +AGF ENQ YG GTN +T GQK+ LI+GSLAAFF LF+ GY +
Sbjct: 114 EQEAKAKEIARLRAAEKFFRKGTGDFECVECQFVYKAENGDPESLIAKGTAFEDLPEDWLCPVCGQPKDTFEEQGKIVAGFAENQGYGFGTNSLTEGQKSALIYGSLAAFFALFLLGYKMN 234
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A7S2DCL4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCL4_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.780e-35 Identity = 63/106 (59.43%), Postives = 80/106 (75.47%), Query Frame = 1
Query: 46 EVERLRAAEKFIVKSTGEYECTQCSFVYAAN-QPRPFDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
E++RLRAAEKFIV++TG+Y C C +VY N Q F LP++W+CP C S K F+++T TIAGF+ENQ YG GTN+MTG KN LIFGSLA F +LF++GY LE
Sbjct: 77 EIQRLRAAEKFIVEATGKYSCKVCKYVYDENAQGTAFVSLPNSWRCPQCLSQKGVFKSQTQTIAGFQENQEYGFGTNKMTGESKNGLIFGSLAFFAVLFLSGYLLE 182
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A7S2RF64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RF64_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.720e-35 Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 46 EVERLRAAEKFIVKSTGEYECTQCSFVY-AANQPRPFDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
E +RLR AEKF+V++TG EC C +VY A + F +LPS+W+CP C S K FE +T T+AGFEEN YG GTN MT G+KN LIFGSLAAFF+LF+ GY LE
Sbjct: 35 ENQRLRDAEKFVVETTGRAECKTCGYVYDEATEGTQFVELPSSWRCPQCLSQKGFFEVQTRTLAGFEENLQYGFGTNTMTAGEKNNLIFGSLAAFFVLFLGGYLLE 140
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A7S1HWH9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HWH9_9EUGL) HSP 1 Score: 128 bits (322), Expect = 4.900e-34 Identity = 63/128 (49.22%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 4 VMSPAEAERAAKLAEVERLRAAEKFIVKSTGEYECTQCSFVYAANQPRP---------FDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
++ P E ER K +++ L+A EKF+ TG++EC C++ Y A + P F+DLP+ W+CP C +PK F+ V +AGFE NQSYGLGTN MTGGQK++LI+G+L AFF LFI+GYAL+
Sbjct: 168 ILDPLEEERLEKQRKIQELKAQEKFMRLGTGKWECQDCTYQYNAAKGDPNYPIAAGTQFEDLPADWQCPTCGAPKSKFKTDGVEVAGFEANQSYGLGTNSMTGGQKSILIYGALIAFFALFISGYALD 295
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A8J9WIW6_9CHLO (Probable rubredoxin at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WIW6_9CHLO) HSP 1 Score: 125 bits (313), Expect = 1.200e-33 Identity = 65/123 (52.85%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 19 EAERAAKLAEVERLRAAEKFIVKSTGEYECTQCSFVYAANQPRP---------FDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
E+E A K AE +RLRAAEKF+V TGE C C + Y P F DLP W CP+C + K TF+++ IAGF ENQ YGLGTN +TGGQK+LLIFGSL FF LF+ GY +E
Sbjct: 83 ESEAAQKKAEADRLRAAEKFMVVGTGEAVCAGCGYEYMPKNGDPEYPITPGTLFTDLPDDWNCPICGAEKQTFKSKAREIAGFAENQKYGLGTNSLTGGQKSLLIFGSLLLFFFLFLGGYFIE 205
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: I0Z237_COCSC (Rubredoxin-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z237_COCSC) HSP 1 Score: 121 bits (304), Expect = 3.940e-33 Identity = 64/123 (52.03%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 19 EAERAAKLAEVERLRAAEKFIVKSTGEYECTQCSFVYAANQP---------RPFDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
E+E A K AE +RLRAAEKF+V TGE C C + Y PF LP W CP+C + K TF+++ IAGF ENQ YGLGTN +T GQK+LLIFGSL AFF LF+ GY +E
Sbjct: 14 ESEAAQKKAEADRLRAAEKFMVVGTGEAICAGCGYEYLPKNGDPEYPITPGTPFTQLPDDWNCPICGADKVTFQSKAKEIAGFAENQRYGLGTNSLTSGQKSLLIFGSLIAFFFLFLGGYFIE 136
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A7S3K377_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K377_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.440e-33 Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 46 EVERLRAAEKFIVKSTGEYECTQCSFVY--AANQP-------RPFDDLPSTWKCPVCRSPKDTFEARTVTIAGFEENQSYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
E+ RLRAAEKFI + TG Y C CS+ Y QP PF LP++W+CP CR+ KD FE +T+TIAGF ENQ YGLG N MT K+ LIFGSLAAFF+LF+ GY L
Sbjct: 77 EIARLRAAEKFIEQETGIYICKVCSYKYDPEVGQPIGGIQPGTPFSQLPASWRCPTCRAQKDAFEPQTLTIAGFAENQGYGLGGNAMTEESKSTLIFGSLAAFFVLFMGGYLLN 190
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Match: A0A835Z7Q6_9STRA (Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q6_9STRA) HSP 1 Score: 130 bits (328), Expect = 7.200e-33 Identity = 77/159 (48.43%), Postives = 85/159 (53.46%), Query Frame = 1
Query: 55 RLRAAEKFIVKSTGEYECTQCSFVYAANQ-PRPFDDLPSTWKCP---------------VCRSPKDTFEARTVTIAGFEENQ-----------------------------------------SYGLGTNQMTGGQKNLLIFGSLAAFFLLFIAGYALE 360
RLRAAEKFIV+STG+YEC C++VY A Q R F+DLP TWKCP VCR+PKDTF A+TVTIAGFEENQ YG GTN MTGGQKNLLIFG L F LF+ GYALE
Sbjct: 743 RLRAAEKFIVRSTGDYECRSCAYVYMAKQNERNFEDLPGTWKCPXXXXXXXXXXXXXXXVCRAPKDTFMAQTVTIAGFEENQRTINLKPLVNAPIRGYGFGASLEYERGQCRALGAFAAMDGLGYGFGTNSMTGGQKNLLIFGGLGVFLALFLLGYALE 901 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6477.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6477.1.1 >prot_P-wetherbeei_contig6477.1.1 ID=prot_P-wetherbeei_contig6477.1.1|Name=mRNA_P-wetherbeei_contig6477.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp MSPAEAERAAKLAEVERLRAAEKFIVKSTGEYECTQCSFVYAANQPRPFDback to top mRNA from alignment at P-wetherbeei_contig6477:830..1672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6477.1.1 ID=mRNA_P-wetherbeei_contig6477.1.1|Name=mRNA_P-wetherbeei_contig6477.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig6477:830..1672+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6477:830..1672+ >mRNA_P-wetherbeei_contig6477.1.1 ID=mRNA_P-wetherbeei_contig6477.1.1|Name=mRNA_P-wetherbeei_contig6477.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig6477:830..1672+ (Phaeothamnion wetherbeei SAG_119_79)back to top |