mRNA_P-wetherbeei_contig6458.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6458.3.2
Unique NamemRNA_P-wetherbeei_contig6458.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: A0A835ZFW5_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW5_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.850e-116
Identity = 189/325 (58.15%), Postives = 217/325 (66.77%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAAHPR--PHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRLT 975
            CYTSYE FR GAA  PDA CLGHR VDS G  TPY+FQ+Y EV  RVD  AAGLE   LTP NADGMKLLGLYSRNRPEW+I EQAAF HG VTVPMYDTLGPETVE++ AQ G+ AV+CGG  EL RLA  A  G C +LA A+ MDP+   A                                  GLRV   SE+E  GAAH    PHRPP++ D ATFCYTSGTTG PKGA+I H N++SDAA   + G    T ++VYFSYLPLPHIFER +QV +FC    VGF+R +P  LV D+ ALRP +MPAVPR+LNR HD++T
Sbjct:   57 CYTSYETFRRGAAQAPDAPCLGHRAVDSAGQPTPYIFQSYREVLARVDRLAAGLEQERLTPPNADGMKLLGLYSRNRPEWVIGEQAAFAHGGVTVPMYDTLGPETVEFVVAQTGLVAVLCGGEAELRRLAAAARGGACATLAAAVTMDPVGPAARSAAEVA---------------------------GLRVYLMSELEEIGAAHLEAWPHRPPSANDIATFCYTSGTTGNPKGALIRHVNMVSDAAGCYAMGLAHCTPDEVYFSYLPLPHIFERQVQVAVFCGGAPVGFWRNNPLELVADMAALRPVLMPAVPRVLNRLHDKIT 354          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 6.970e-90
Identity = 158/301 (52.49%), Postives = 186/301 (61.79%), Query Frame = 1
Query:  130 EVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQ------------------AAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAAHPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRLTQ 978
            EVEERVD+FA+GLE  GLTP N DGMKLL LYSRNRPEWIIAEQ                  AAF H A+TVP+YDTLGPETVE++  Q  +  VVC G  EL +L  +A  GRCPSL   +VMD +                                      GLRV  F+EVE  GA+H  PHRPP   D ATFCYTSGTTG PKGA++TH+N I+D+AAA         + DVY SYLPLPHIFER +QV +     +VG FRGDPTLLVED++ALRPT+M AVPR+LNR HD++ Q
Sbjct:   39 EVEERVDNFASGLEQEGLTPPNPDGMKLLALYSRNRPEWIIAEQGGISYPSDSGTPIRILMKAAFAHSALTVPLYDTLGPETVEFVITQTSLTTVVCSGVAELRKLVAIADGGRCPSLKTVVVMDGI---------------------------SERERREAVRAGLRVYAFAEVEGIGASHAHPHRPPGPNDLATFCYTSGTTGNPKGALLTHRNFIADSAAAELMETFNADSTDVYLSYLPLPHIFERMVQVAILNVGAAVGIFRGDPTLLVEDMQALRPTVMAAVPRVLNRLHDKIVQ 312          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: A0A7S2SDD9_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDD9_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.170e-83
Identity = 150/326 (46.01%), Postives = 194/326 (59.51%), Query Frame = 1
Query:    1 ERCYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAAHPR--PHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            E C T YE FR GA   P   CLG R +D  G A PYVF TY+EV  R+D     L      P N DG++LL +YSRNRPEWI+AEQA F  G  TVP+YDTLG +TVEYI  Q G   VVCG   E+A +  VAA+  CP L + + ++P                                       G+ ++ F E+E+ G    R  PH PP+    ATFCYTSGTTG PKGA++THQ+LI+  A+   AG +   +ED++FSYLPLPH+FER +QV +F    +VGF++G+P  LVEDL+ALRPTI P+VPR+LNR +D++
Sbjct:   34 EGCRTVYESFRNGAMVSPGGACLGWRPLDPNGDAGPYVFMTYNEVLSRIDAVHNALVTRNALPPNEDGLRLLAIYSRNRPEWIVAEQACFASGGATVPLYDTLGADTVEYILLQTGAPTVVCGTPAEVASVLAVAAA--CPRLGLVVCVEPF---------------------------TEELVGTARSKGVALVSFDELESEGRRMLRRLPHSPPSPGCVATFCYTSGTTGSPKGALLTHQSLIASVASVEQAGILELDSEDIHFSYLPLPHVFERLVQVNIFASGAAVGFYQGNPLKLVEDLQALRPTIFPSVPRVLNRIYDKI 330          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: W7TAS6_9STRA (Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAS6_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.070e-79
Identity = 146/325 (44.92%), Postives = 192/325 (59.08%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAAHPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTA---EDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            CYT YE+FR   A +P    LGHR +DS G A PYVF++Y E   R+D+ A+ LEH GL P   DG++LLGLY +N PEWIIA+QAAF     TVP+YDTLGP+ V Y+  Q  +AAVVCG   EL  L  VAA+  CPSL  A++                                          GL++    ++E  G  +P+PH PP   D ATF YTSGTTG PKGA++TH+N ++       AG  L      +D++FSYLPLPH+FER M + +  +  ++GF++G P  LVEDL+ALRPT MPAVPR+LNR +D++
Sbjct:   43 CYTIYELFRRSVAIYPHRPFLGHRPIDSEGHAAPYVFESYEEAARRIDNLASALEHEGLCPPTPDGLRLLGLYMKNCPEWIIADQAAFTLHGATVPLYDTLGPDAVGYVIKQTELAAVVCG-PQELENL--VAAAPECPSLKAAVLT--------------------------CSVLSDHHRALARKGGLKLYSLMDLEKLGFRYPQPHFPPDPDDVATFSYTSGTTGGPKGALLTHRNFLT----VYCAGKALEVENFPDDIHFSYLPLPHVFERVMLLAVLGNGAAMGFWQGSPERLVEDLQALRPTCMPAVPRVLNRMYDKV 334          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: B8CBL9_THAPS (Long-chain-fatty-acid--CoA ligase n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBL9_THAPS)

HSP 1 Score: 253 bits (646), Expect = 3.950e-75
Identity = 148/328 (45.12%), Postives = 186/328 (56.71%), Query Frame = 1
Query:   13 TSYEVFRAGAAAHPDAGCLGHREVDSR-GAATPYVFQTYHEVEERVDHFAAGLEHGG---LTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGA----AHPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            T YE  R G   +P   CLG R   S  G ATPYV+ +Y E   R+D  A GLE GG   L  RN DGM LLG+Y +N  EWI+AEQA +C G  TVP YDTLGP+TV +I    G++ VVC    EL RL E   SG CP     I++D +   A                                  GL+V+ F+++EA GA         H PP   D ATFCYTSGTTG+PKGA+ITH+N++S A   L+   +LPT  D + SYLPLPHIFER +   M     S+ FFRGDP LL+ED+ A RPT++P VPR+LN+ HD++
Sbjct:   40 TLYEAIRRGRDVNPLGPCLGFRATSSNSGYATPYVYGSYGECVARIDAVACGLERGGGERLLDRNEDGMLLLGIYMKNCMEWILAEQAVYCIGGATVPFYDTLGPDTVRFILEHTGMSCVVCS-RKELERLCEAKKSGTCPKFHSVILVDGVTAQATDMANGA---------------------------GLKVVSFAKIEALGAQIVPTEGHKHTPPDPKDIATFCYTSGTTGDPKGALITHENIMS-AVGGLNEIPILPT--DRHISYLPLPHIFERVVVAQMLTSGASIAFFRGDPLLLIEDIVACRPTMVPMVPRVLNKIHDKI 336          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: A0A7S2UI66_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI66_9STRA)

HSP 1 Score: 252 bits (644), Expect = 8.230e-75
Identity = 141/326 (43.25%), Postives = 188/326 (57.67%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAAHP----RPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            C T YE  R G   +P   CLG R + + G ATPYV+ +Y E   RVD FAAGL+   L   N D + LLG+Y +N  EWI+AE   +  G  TVP+YDTLGPETV+++  Q G++AVVC  A ELA L E  A+G+CP     I++D +   A                                  GL ++ F++VEA GA         H+PP+  D ATFCYTSGTTG PKGA+ITH+N++S+ A         P   D + SYLPLPHIFER +   +    +S+ F+RGDP LL+ED++A RPT+MPA PR+LN+ HD++
Sbjct:   41 CRTLYEALRRGGDVNPLGPCLGFRAISTSGFATPYVYSSYTESIARVDAFAAGLDRLELVQPNDDNLLLLGIYMKNCMEWILAEHGVYTIGGATVPLYDTLGPETVQFVLEQTGMSAVVCTRA-ELAHLCEAKATGQCPKFQHVILVDGVIPEAARQAKLV---------------------------GLHLVSFAKVEAVGAQSTAISKHKHKPPSGKDLATFCYTSGTTGNPKGALITHENIVSNIAGMHQL--FQPQPLDRHLSYLPLPHIFERMVVSQILLAGSSIAFYRGDPLLLIEDIQACRPTLMPAAPRVLNKIHDKI 336          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: A0A7S1VYZ7_9STRA (Long-chain-fatty-acid--CoA ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYZ7_9STRA)

HSP 1 Score: 248 bits (633), Expect = 3.500e-73
Identity = 145/326 (44.48%), Postives = 182/326 (55.83%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGA----AHPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            C T YE  R G    P   CLG R V + G ATP+V+ +Y E   R+D+FAAGLE   L  +N DGM LLG+Y RN  EWIIAEQ  +  G +TVP YDTLGPETV+++     +A VVC  A EL RL     +G+CP     I++D +   A                                  GL V+ F++VEA GA         H PP+  D ATFCYTSGTTG PKGA+ITH+N++S  A       V P   D + SYLPLPHIFER +   MF +  SV F+RG P  LVED+ A RPT+M A PR+LN+ HD++
Sbjct:   50 CRTLYEAVRRGRDISPLGPCLGFRAVSTSGFATPFVYSSYVESVARMDNFAAGLERLSLVEKNDDGMLLLGIYMRNCMEWIIAEQGTYALGGITVPFYDTLGPETVQFMLTHTDMACVVCTRA-ELPRLCSAKKTGKCPKFRAVILVDGVTPDATSMAKEA---------------------------GLDVVSFAKVEAVGAQLVATEGHKHNPPSGHDVATFCYTSGTTGNPKGALITHENVMSTIAGMPDGVDVEPF--DRHISYLPLPHIFERVVINQMFLNGASVAFYRGKPEYLVEDIIACRPTMMIAAPRVLNKIHDKI 345          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: B7FQ93_PHATC (Precursor of ligase long chain acyl-coa ligase n=5 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ93_PHATC)

HSP 1 Score: 248 bits (632), Expect = 4.810e-73
Identity = 144/327 (44.04%), Postives = 184/327 (56.27%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAA----HPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAE-DVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            C T YE FR GA  +P   C+G R V + G ATP+++ +Y E   R+D FAAGL+   L   N DG+ +L LY +N  E  I E  AF  G  +V MYDTLGP+TV +I  Q    +VVC  A EL +L E   SG+CP+   AI++D +   A                                  GL VL F++VEA GA         HRPPA  D A FCYTSGTTG PKGA++TH+N++S  A    A G L     D + SYLPL HIFER +   MFC   SV FFRGDPTLL+ED++A RPT+MP  PR+LN+ +D++
Sbjct:   39 CRTMYEGFRRGAKVNPLGPCMGFRAVSTTGFATPFIYSSYTECLARIDAFAAGLDTLKLIQPNEDGLAVLALYMKNCMEGAIGEHGAFAIGGSSVLMYDTLGPDTVTFILDQTSARSVVCTRA-ELPKLCESKVSGKCPAFTAAILVDGVTEDAAKMALEA---------------------------GLEVLSFAKVEAVGAVCIAEKGHHHRPPAPTDVAAFCYTSGTTGNPKGALLTHENIMSAIAGFYGAVGDLEAQPFDRHLSYLPLAHIFERIVSSQMFCAGASVAFFRGDPTLLIEDMQACRPTVMPVAPRVLNKIYDKI 337          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: A0A7S2LAK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAK4_9STRA)

HSP 1 Score: 243 bits (619), Expect = 8.520e-73
Identity = 143/327 (43.73%), Postives = 183/327 (55.96%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGAAHPR-----PHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            C T YE  R GA   P   CLG R + + G ATP+V+ +Y E   RVD FA GLE   L  RN++GM LLG+Y +N  EW++AE A +  G  TVP+YDTLGP+TV+++  Q  +  VVC    EL RL     SG+CP+  V I+++ +                                       L V+ F++VEA GA         PH PP   D ATFCYTSGTTG PKGA+ITH+NL S  +  +S  GV   A D + SYLPLPHIFER +         SVGF RGDP LLVED+ ALRPTI+P  PR+LN+ +D++
Sbjct:   42 CQTLYECLRRGAETSPLGPCLGRRAISNNGFATPFVYSSYTECVARVDSFACGLERLNLLQRNSNGMLLLGIYMKNCMEWVLAEHAIYTLGGATVPLYDTLGPDTVQFVLHQTDMPCVVCTRG-ELPRLCAAKKSGQCPAFRVVILINGV---------------------------IPDSVRLAREANLEVISFAKVEAVGAQVAATEGFTPH-PPNGKDVATFCYTSGTTGNPKGALITHENLTSSIS-GVSNLGVAMEATDRHLSYLPLPHIFERVVLSSTLQAGGSVGFSRGDPLLLVEDIVALRPTILPVAPRVLNKIYDKI 338          
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Match: A0A448Z6J4_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6J4_9STRA)

HSP 1 Score: 245 bits (626), Expect = 3.630e-72
Identity = 147/328 (44.82%), Postives = 183/328 (55.79%), Query Frame = 1
Query:    7 CYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVDHFAAGLEHGGLTPRNADG-MKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMYDTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMDPLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRVLHFSEVEAAGA----AHPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAALSAGGVLP-TAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVEDLRALRPTIMPAVPRILNRFHDRL 972
            C T YE FR G   +P   CLG R +   G ATPY++ +Y EV  RV+ FAAGLE   L P   D  M LLGLY +N  EW IAEQA FC    TVP YDTLGPE+VE+I  Q     VV   A EL RL  V  +G CP   V ++++ +   A                                  GL VL F++VEA GA         HRPP+  D  TFCYTSGTTG+PKGA++TH+NLIS   A      V      D + SYLPL HIFER +Q  ++ +  S+ FFRGDPTLL+EDL+A RPT+ PA PR+LN+ +D++
Sbjct:   39 CRTLYEGFRRGHEVNPLGPCLGFRAMSVNGLATPYIYSSYTEVLARVNAFAAGLETLDLVPPTRDDKMVLLGLYMKNCMEWFIAEQAIFCVAGATVPFYDTLGPESVEFILKQTSTKTVVSTRA-ELERLCAVKKNGLCPDFKVVVLVNGVTAEAAEMAREA---------------------------GLEVLSFAKVEAVGAHRIDTEGFQHRPPSGNDVFTFCYTSGTTGDPKGALLTHENLIS---AVAGVDXVFQFEGNDRHLSYLPLAHIFERIVQCQVYMNGASIAFFRGDPTLLIEDLQACRPTVFPAAPRVLNKIYDKI 335          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6458.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFW5_9STRA1.850e-11658.15Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
D8LCY7_ECTSI6.970e-9052.49Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarp... [more]
A0A7S2SDD9_9STRA1.170e-8346.01Long-chain-fatty-acid--CoA ligase n=1 Tax=Rhizochr... [more]
W7TAS6_9STRA1.070e-7944.92Long-chain-fatty-acid--CoA ligase n=2 Tax=Monodops... [more]
B8CBL9_THAPS3.950e-7545.12Long-chain-fatty-acid--CoA ligase n=2 Tax=Thalassi... [more]
A0A7S2UI66_9STRA8.230e-7543.25Long-chain-fatty-acid--CoA ligase n=1 Tax=Attheya ... [more]
A0A7S1VYZ7_9STRA3.500e-7344.48Long-chain-fatty-acid--CoA ligase (Fragment) n=1 T... [more]
B7FQ93_PHATC4.810e-7344.04Precursor of ligase long chain acyl-coa ligase n=5... [more]
A0A7S2LAK4_9STRA8.520e-7343.73Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A448Z6J4_9STRA3.630e-7244.82Long-chain-fatty-acid--CoA ligase n=1 Tax=Pseudo-n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6458contigP-wetherbeei_contig6458:1569..3402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog35128.Thaps29867
PFAMsAMP-binding
Model size1008
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.47e-76
EggNOG OGsCOG1022@1|root,KOG1256@2759|Eukaryota,2XERM@2836|Bacillariophyta
EC6.2.1.3
DescriptionAMP-binding enzyme
Cds size1008
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186914.8561761-CDS-P-wetherbeei_contig6458:1568..18291683186914.8561761-CDS-P-wetherbeei_contig6458:1568..1829Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6458 1569..1829 +
1683186914.8718784-CDS-P-wetherbeei_contig6458:2238..28111683186914.8718784-CDS-P-wetherbeei_contig6458:2238..2811Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6458 2239..2811 +
1683186914.8841631-CDS-P-wetherbeei_contig6458:3228..34021683186914.8841631-CDS-P-wetherbeei_contig6458:3228..3402Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6458 3229..3402 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6458.3.2prot_P-wetherbeei_contig6458.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6458 1569..3402 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6458.3.2

>prot_P-wetherbeei_contig6458.3.2 ID=prot_P-wetherbeei_contig6458.3.2|Name=mRNA_P-wetherbeei_contig6458.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=336bp
ERCYTSYEVFRAGAAAHPDAGCLGHREVDSRGAATPYVFQTYHEVEERVD
HFAAGLEHGGLTPRNADGMKLLGLYSRNRPEWIIAEQAAFCHGAVTVPMY
DTLGPETVEYIAAQCGVAAVVCGGATELARLAEVAASGRCPSLAVAIVMD
PLPTTAAAAVTATAVAAAVGGSVGMTAAAAAVAVAAAAAAGLRVLHFSEV
EAAGAAHPRPHRPPASVDAATFCYTSGTTGEPKGAVITHQNLISDAAAAL
SAGGVLPTAEDVYFSYLPLPHIFERAMQVVMFCHATSVGFFRGDPTLLVE
DLRALRPTIMPAVPRILNRFHDRLTQVWCRRRTSG*
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mRNA from alignment at P-wetherbeei_contig6458:1569..3402+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6458.3.2 ID=mRNA_P-wetherbeei_contig6458.3.2|Name=mRNA_P-wetherbeei_contig6458.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1834bp|location=Sequence derived from alignment at P-wetherbeei_contig6458:1569..3402+ (Phaeothamnion wetherbeei SAG_119_79)
GAAAGGTGCTATACGTCCTACGAGGTCTTCCGCGCGGGCGCCGCCGCGCA CCCGGACGCGGGCTGCCTCGGCCACCGGGAGGTGGACTCGCGCGGCGCGG CGACGCCGTACGTTTTCCAAACGTACCACGAAGTTGAAGAGCGCGTCGAC CATTTCGCGGCGGGGCTCGAGCACGGCGGGCTGACGCCGCGCAACGCCGA CGGCATGAAGCTGCTGGGGCTCTATTCGCGCAACCGCCCGGAGTGGATCA TTGCCGAGCAGGTGAACTAAGAACAAACGAGCTTGAGAGAGCGGGACGGG GAAATTCGTCGAACGAACAGGAGATTTCTTTTGGACTGGAGAATTCTTGA ACTGAAAAGCTCTTATTGAGGGGTTGGAAACTGACGGCGAAAAAGGGCCA ACATGGGAGACTTTTGAAAGAAAGTTTTTCGGGCATGGTCCTCCACGTTC GCTTCGACGCATCGTAATCTGTTGCCACCAAGGCGTCTCCATCCCTTCTC TCCTTTCGTCCGACCCTGTTCTTGTGTGAAGTCGGTTTCCTGAAGCTGGA ACGCGAACGTTTGGCAGTTTTCCCTCGTCTCAAAGAAAGACTGCCCTTCT TTTCCCGTCATTACAACTCACGTTCTCTCCGGCCTAGACCTAACCACGCC CTCAAAACATCGCCGAACAGGCCGCCTTCTGCCACGGCGCCGTGACGGTC CCGATGTACGACACGCTCGGCCCTGAGACGGTCGAGTACATTGCCGCGCA GTGCGGTGTCGCCGCCGTGGTCTGCGGCGGCGCCACCGAGCTCGCCCGCC TCGCCGAGGTGGCGGCGTCGGGCCGCTGCCCGTCTCTCGCCGTTGCCATC GTCATGGACCCACTACCGACAACAGCGGCAGCGGCGGTGACGGCGACGGC GGTGGCCGCGGCGGTAGGGGGGTCGGTGGGAATGACGGCGGCAGCGGCGG CGGTGGCGGTGGCGGCGGCGGCGGCAGCGGGGCTGCGGGTGCTGCACTTT TCCGAGGTGGAGGCGGCAGGCGCGGCGCACCCGCGTCCGCACCGCCCGCC GGCGTCGGTCGACGCGGCGACGTTCTGCTACACGAGCGGCACGACGGGGG AGCCGAAGGGCGCCGTCATCACCCACCAGAACCTTATCAGCGACGCGGCA GCGGCGTTGTCGGCCGGTGGCGTGCTGCCGACGGCCGAGGACGTTTACTT TAGCTACCTGCCGCTGCCGCACATCTTCGAGCGGGCCATGCAGGTGCGAG GATAGGATCGAGAGAGTGGGTGAGCAAGCACCGCAGGGCAGATCAGGGGG ACGAGTGAGTAGGAGGGGAAGGAAGTGTCTCTTTGTGGACTCAAATGAGC TTCTTGGCCCCGTTTAGTACGCTGCTGCCGCTTGGGTGCTTTTGGCGGCG TGGCGCCGACTCGGGCTGCAGTCGACCATCGACCATTCGTGCCAGCGTTG GCAGAGGTAGTTTCCTTCAGGCGTTTTCTTTCGACGGCGGAATGAAATTC TAAGCGGATGAATCCAGCAGCGTTGGCGTTGCTCTGGCGTTTCAGCATCT GTTGTTAGCTCGACTGGTGTTCGGGAGCCCGAGGATGGTGACTAGGTTTG GCCCTCTGTCGCTTTCCGTCCCTTCCTCCGTGCTCCAAATCTCCAAACAC CTTCGTGCAGGTGGTGATGTTCTGCCACGCGACGTCGGTGGGATTCTTCC GCGGGGACCCGACGCTGCTGGTGGAGGACCTGCGGGCACTGCGGCCCACC ATCATGCCCGCGGTGCCGCGCATCCTCAATCGCTTCCACGACCGCCTGAC CCAGGTGTGGTGCAGGAGGAGAACTTCTGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6458:1569..3402+

>mRNA_P-wetherbeei_contig6458.3.2 ID=mRNA_P-wetherbeei_contig6458.3.2|Name=mRNA_P-wetherbeei_contig6458.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig6458:1569..3402+ (Phaeothamnion wetherbeei SAG_119_79)
GAAAGGTGCTATACGTCCTACGAGGTCTTCCGCGCGGGCGCCGCCGCGCA
CCCGGACGCGGGCTGCCTCGGCCACCGGGAGGTGGACTCGCGCGGCGCGG
CGACGCCGTACGTTTTCCAAACGTACCACGAAGTTGAAGAGCGCGTCGAC
CATTTCGCGGCGGGGCTCGAGCACGGCGGGCTGACGCCGCGCAACGCCGA
CGGCATGAAGCTGCTGGGGCTCTATTCGCGCAACCGCCCGGAGTGGATCA
TTGCCGAGCAGGCCGCCTTCTGCCACGGCGCCGTGACGGTCCCGATGTAC
GACACGCTCGGCCCTGAGACGGTCGAGTACATTGCCGCGCAGTGCGGTGT
CGCCGCCGTGGTCTGCGGCGGCGCCACCGAGCTCGCCCGCCTCGCCGAGG
TGGCGGCGTCGGGCCGCTGCCCGTCTCTCGCCGTTGCCATCGTCATGGAC
CCACTACCGACAACAGCGGCAGCGGCGGTGACGGCGACGGCGGTGGCCGC
GGCGGTAGGGGGGTCGGTGGGAATGACGGCGGCAGCGGCGGCGGTGGCGG
TGGCGGCGGCGGCGGCAGCGGGGCTGCGGGTGCTGCACTTTTCCGAGGTG
GAGGCGGCAGGCGCGGCGCACCCGCGTCCGCACCGCCCGCCGGCGTCGGT
CGACGCGGCGACGTTCTGCTACACGAGCGGCACGACGGGGGAGCCGAAGG
GCGCCGTCATCACCCACCAGAACCTTATCAGCGACGCGGCAGCGGCGTTG
TCGGCCGGTGGCGTGCTGCCGACGGCCGAGGACGTTTACTTTAGCTACCT
GCCGCTGCCGCACATCTTCGAGCGGGCCATGCAGGTGGTGATGTTCTGCC
ACGCGACGTCGGTGGGATTCTTCCGCGGGGACCCGACGCTGCTGGTGGAG
GACCTGCGGGCACTGCGGCCCACCATCATGCCCGCGGTGCCGCGCATCCT
CAATCGCTTCCACGACCGCCTGACCCAGGTGTGGTGCAGGAGGAGAACTT
CTGGCTGA
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