mRNA_P-wetherbeei_contig6454.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: A0A2R5GGQ9_9STRA (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ9_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.370e-62 Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = 2
Query: 125 EGMSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
E ++ RLQQELM LM ATAFPDGDNLF W+ I G+ +TVYEGLSYKL + FP NYPY APTI F TPCFHPNVD G ICLDILK+KWSA YSVST+L SLRSLL+DPNNDSPLN AA++W+N E+++++LKK
Sbjct: 10 ESVTKRLQQELMQLMRDGDSNATAFPDGDNLFSWSGNINGAPETVYEGLSYKLHIDFPSNYPYTAPTIRFVTPCFHPNVDAHGNICLDILKEKWSATYSVSTILTSLRSLLSDPNNDSPLNGVAAQLWDNQEEYKRVLLKK 150
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: A0A1Y1VHG7_9FUNG (UBC core domain-containing protein n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1VHG7_9FUNG) HSP 1 Score: 202 bits (514), Expect = 9.340e-62 Identity = 92/138 (66.67%), Postives = 109/138 (78.99%), Query Frame = 2
Query: 131 MSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLK 544
++ RLQ ELM LMM+ I G +AFP+ DNL W TI+G+ TVY GLSYK+ + FP NYPY APTI FTTPCFHPNVD G ICLDILKDKWSA Y+V T+LLSL+SLL +PNNDSPLNT AA+MW+ P EF+K V+K
Sbjct: 9 VTKRLQNELMQLMMAGIPGVSAFPESDNLLSWVGTIEGAPGTVYHGLSYKISLKFPVNYPYSAPTIKFTTPCFHPNVDSEGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNDSPLNTYAAQMWDKPEEFKKHVIK 146
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI) HSP 1 Score: 202 bits (514), Expect = 9.970e-62 Identity = 91/139 (65.47%), Postives = 119/139 (85.61%), Query Frame = 2
Query: 131 MSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
++ RLQQELM +MM + GA+AFP+ DNLF+WTAT+ GS+ T YEGL+YKL++VFP+ YPYKAP ITF TPCFHPNVD+ G ICLDILK+KWS+A+SVST+L SLRSLLADPNN+SPLNT+AA++W + ++R++ +K
Sbjct: 8 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQVCKQK 146
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: A0A0L0D7X5_THETB (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D7X5_THETB) HSP 1 Score: 202 bits (513), Expect = 2.090e-61 Identity = 90/139 (64.75%), Postives = 111/139 (79.86%), Query Frame = 2
Query: 131 MSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
++ RLQ ELM+LMMS +G +AFPDGDNLF W T++G+D TVYEGL YKL + FP +YPY APT+ F TPCFHPNVD G ICLDILKDKWSA Y+VST+L+S+RSLL +PNNDSPLN AA +W+N E+R + +KK
Sbjct: 22 VAKRLQSELMSLMMSGDEGVSAFPDGDNLFHWVGTVKGADGTVYEGLEYKLSLTFPTSYPYSAPTVKFVTPCFHPNVDQYGNICLDILKDKWSAIYNVSTILISIRSLLGEPNNDSPLNGYAAALWDNQTEYRAVNVKK 160
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: UPI0006B0F894 (ubiquitin-conjugating enzyme E2 C-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0F894) HSP 1 Score: 200 bits (509), Expect = 1.500e-60 Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 2
Query: 131 MSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
+S RLQQELM LMMS G +AFPDGDNLF+W TI G+D TVYEGL YKL + FP +YPY AP I F TPCFHPNVD G ICLDILK+KW+A Y V TVLLSL+SLL +PN DSPLNT AAE+WENP +++K++L+K
Sbjct: 35 VSKRLQQELMKLMMSGDKGISAFPDGDNLFRWIGTIVGADGTVYEGLIYKLVLEFPSSYPYTAPIIRFDTPCFHPNVDTQGNICLDILKEKWTALYDVRTVLLSLQSLLGEPNIDSPLNTHAAELWENPTQYKKVLLEK 173
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: A0A1S3J2X1_LINUN (ubiquitin-conjugating enzyme E2 C-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J2X1_LINUN) HSP 1 Score: 199 bits (506), Expect = 3.730e-60 Identity = 90/144 (62.50%), Postives = 114/144 (79.17%), Query Frame = 2
Query: 116 KQAEGMSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
K +S RLQQELM+LMMS G +AFPDGDNLF+W T+QG++ TVYEGL YKL + FP +YPY AP + F TP FHPNVD G ICLDILK++WSA Y+V T+L+S+RSLL +PNN+SPLNT AAE+WEN V ++K++L+K
Sbjct: 26 KDTHSVSKRLQQELMSLMMSGETGVSAFPDGDNLFKWVGTLQGAEGTVYEGLKYKLTLDFPSSYPYTAPVVKFDTPIFHPNVDTNGNICLDILKEEWSALYTVKTILISIRSLLGEPNNNSPLNTHAAELWENQVAYKKLLLEK 169
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: UPI001E1D6D80 (ubiquitin-conjugating enzyme E2 C-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6D80) HSP 1 Score: 198 bits (504), Expect = 7.240e-60 Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 2
Query: 98 RLLSVEKQAEGMSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
R S K +S RLQQEL L+MS G +AFPDGDNLF+W AT+ G+ T YEGLSYKL + FP YPY+APT+ F TPC+HPNVD +G ICLDILK+KWSA Y V T+LLSL+SLL +PNN+SPLN QAAE W N E++K+V++K
Sbjct: 20 RSTSSAKDTHSVSKRLQQELRTLLMSGDPGVSAFPDGDNLFRWVATLIGAKGTAYEGLSYKLSLEFPSGYPYQAPTVKFETPCWHPNVDQSGNICLDILKEKWSALYDVRTILLSLQSLLGEPNNESPLNAQAAEQWNNQTEYKKIVVEK 169
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: A0A5J4Y1P3_9CHLO (Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1P3_9CHLO) HSP 1 Score: 197 bits (502), Expect = 1.230e-59 Identity = 89/146 (60.96%), Postives = 118/146 (80.82%), Query Frame = 2
Query: 122 AEGMSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKKAAAA 559
+ ++ RLQ ELM+LM ++ G +AFPDGD+LF W TIQG+ TVYEG+SYKL + FP +YP+KAPT+ F TPCFHPN+D G ICLDILKDKWSAAYSV TVLLS++SLL +PNNDSPLN+ AA++WE+ +++++++KK A A
Sbjct: 27 SHAVTKRLQSELMSLMSATDPGVSAFPDGDSLFSWVGTIQGAADTVYEGMSYKLSLKFPTDYPFKAPTVKFETPCFHPNIDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNSYAAKLWESQEDYKRVLIKKYAEA 172
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: A0A0L0HNL0_SPIPD (UBC core domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HNL0_SPIPD) HSP 1 Score: 197 bits (501), Expect = 1.440e-59 Identity = 92/137 (67.15%), Postives = 108/137 (78.83%), Query Frame = 2
Query: 131 MSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVL 541
++ RLQ ELM+LMM+ I G +AFPD D+L WTATI G+ TVYEGL YKL M FP YPY APT+TF TPCFHPNVD G ICLDILKDKWSA Y+V T+L+SL+SLL +PNNDSPLN +AAE+W+ P FRK VL
Sbjct: 24 VAKRLQNELMSLMMAGIPGISAFPDADDLTCWTATIHGAPGTVYEGLKYKLSMKFPATYPYNAPTVTFKTPCFHPNVDMNGGICLDILKDKWSAVYTVQTILVSLQSLLGEPNNDSPLNNEAAELWDQPDLFRKQVL 160
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Match: C1MIV7_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MIV7_MICPC) HSP 1 Score: 196 bits (497), Expect = 7.210e-59 Identity = 87/142 (61.27%), Postives = 113/142 (79.58%), Query Frame = 2
Query: 122 AEGMSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKLRMVFPENYPYKAPTITFTTPCFHPNVDDAGAICLDILKDKWSAAYSVSTVLLSLRSLLADPNNDSPLNTQAAEMWENPVEFRKMVLKK 547
++ ++ RLQ ELM+LM S+ G +AFPDGDN+F W TI+G+ T YEGL+YKL + FP +YP+KAPT+ F TPCFHPNVD G ICLDILK+KWSA Y+V T+LLS++SLL +PNN SPLN QAA+MWEN E++K++ KK
Sbjct: 28 SQAVARRLQSELMSLMTSADAGISAFPDGDNIFNWVGTIEGAVGTAYEGLTYKLSLAFPNDYPFKAPTVKFETPCFHPNVDQFGNICLDILKEKWSAVYNVRTILLSIQSLLGEPNNASPLNAQAAQMWENQTEYKKVLHKK 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6454.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6454.1.1 >prot_P-wetherbeei_contig6454.1.1 ID=prot_P-wetherbeei_contig6454.1.1|Name=mRNA_P-wetherbeei_contig6454.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp MSNRLQQELMNLMMSSIDGATAFPDGDNLFQWTATIQGSDKTVYEGLSYKback to top mRNA from alignment at P-wetherbeei_contig6454:2137..3309+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6454.1.1 ID=mRNA_P-wetherbeei_contig6454.1.1|Name=mRNA_P-wetherbeei_contig6454.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1173bp|location=Sequence derived from alignment at P-wetherbeei_contig6454:2137..3309+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6454:2137..3309+ >mRNA_P-wetherbeei_contig6454.1.1 ID=mRNA_P-wetherbeei_contig6454.1.1|Name=mRNA_P-wetherbeei_contig6454.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig6454:2137..3309+ (Phaeothamnion wetherbeei SAG_119_79)back to top |