mRNA_P-wetherbeei_contig644.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A2V3UJG5_9HYPH (ATP-binding protein Uup n=3 Tax=Chelatococcus TaxID=28209 RepID=A0A2V3UJG5_9HYPH) HSP 1 Score: 253 bits (646), Expect = 1.880e-78 Identity = 121/164 (73.78%), Postives = 140/164 (85.37%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL+QASLS+++G R+CLVGRNGSGKSTLLKIAAGLI PD+G+R L G TLRYLPQEPDL+G+ + A+ AGLAPGDD YR YLLE LGL G DP LSGGEARRAALA++LAP+PDILLLDEPTNHLDLP IEWLESEL +RSA+VL+SHDRRF++ L
Sbjct: 19 PLLEQASLSVSSGERLCLVGRNGSGKSTLLKIAAGLITPDRGQRFLQPGTTLRYLPQEPDLTGFSTTSAYVEAGLAPGDDTYRAQYLLEQLGLAGTEDPTRLSGGEARRAALARLLAPEPDILLLDEPTNHLDLPVIEWLESELRSLRSALVLISHDRRFMETL 182
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A2W4MRI5_9PROT (Elongation factor 3 (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MRI5_9PROT) HSP 1 Score: 242 bits (617), Expect = 2.470e-78 Identity = 120/164 (73.17%), Postives = 135/164 (82.32%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL A LS+ G R+CLVGRNGSGKSTLLKIAAGL+ D+GER + AT+RYLPQEPDLS + + A+ AGLAPGDD YR YLLE LGL GE P LSGGEARRAALA+VLAP+PDILLLDEPTNHLDLPAIEWLESEL MRSA+VL+SHDRRFL++L
Sbjct: 19 PLLTGAELSVGEGERLCLVGRNGSGKSTLLKIAAGLVEQDRGERFVQPTATIRYLPQEPDLSAFPTTLAYVEAGLAPGDDAYRARYLLEQLGLTGEEAPANLSGGEARRAALARVLAPEPDILLLDEPTNHLDLPAIEWLESELKAMRSALVLISHDRRFLESL 182
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A2U8W821_9HYPH (ATP-binding protein Uup n=3 Tax=Methylobacterium TaxID=407 RepID=A0A2U8W821_9HYPH) HSP 1 Score: 251 bits (641), Expect = 9.120e-78 Identity = 121/164 (73.78%), Postives = 140/164 (85.37%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PL+++A ++IA G R CLVGRNGSGKSTLL+IAAGL+ PD+G R + GAT+RYL QEPD +GYESV AFA AGLAPGDDP+R YLLE+LGL G+ DP+ LSGGE RRAALAQ LAP+PDILLLDEPTNHLDLPAIEWLE+EL G RSA+VL+SHDRRFL L
Sbjct: 20 PLIERAEIAIAPGERACLVGRNGSGKSTLLRIAAGLVEPDRGVRFVQPGATIRYLAQEPDFAGYESVLAFAEAGLAPGDDPHRARYLLESLGLTGDEDPRRLSGGEGRRAALAQALAPEPDILLLDEPTNHLDLPAIEWLEAELKGTRSALVLISHDRRFLSAL 183
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: UPI00136AA3D6 (ATP-binding cassette domain-containing protein n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI00136AA3D6) HSP 1 Score: 249 bits (635), Expect = 1.100e-77 Identity = 119/164 (72.56%), Postives = 137/164 (83.54%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL +L++ G R+CLVGRNGSGKSTLLKIAAGL+ PD GER++ +G T+RYLPQEPDLS + + A A AGLAPGDDPYR YLL+ LGL G DPK LSGGEARRAALAQ LAP+PD+LLLDEPTNHLDLPAIEWLE+ELA RSA+VL+SHDRRFL+ L
Sbjct: 22 PLLSDVALAVGPGERLCLVGRNGSGKSTLLKIAAGLVEPDAGERVVRQGVTIRYLPQEPDLSAFATTLAVAEAGLAPGDDPYRAAYLLQQLGLDGSEDPKRLSGGEARRAALAQALAPEPDVLLLDEPTNHLDLPAIEWLEAELAASRSALVLISHDRRFLERL 185
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: UPI001EE10E98 (ATP-binding cassette domain-containing protein n=1 Tax=unclassified Xanthobacter TaxID=2623496 RepID=UPI001EE10E98) HSP 1 Score: 251 bits (640), Expect = 1.260e-77 Identity = 120/164 (73.17%), Postives = 138/164 (84.15%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL A LS++AG RVCLVGRNGSGKSTLLK+AAGL+APD G R GAT+RYLPQEPD +G+ + A+ AGL PGDD YR YLLE LGL G+ DP LSGGEARRAALA+V+AP+PD+LLLDEPTNHLDLPAIEWLESEL G++SAIVL+SHDRRFL+NL
Sbjct: 19 PLLDGADLSVSAGDRVCLVGRNGSGKSTLLKVAAGLMAPDDGTRFFQPGATVRYLPQEPDFAGFATTLAYVEAGLGPGDDAYRAQYLLEQLGLSGQEDPAHLSGGEARRAALARVIAPEPDVLLLDEPTNHLDLPAIEWLESELRGLKSAIVLISHDRRFLENL 182
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A0U3P9T9_9HYPH (ATP-binding protein Uup n=7 Tax=Pannonibacter TaxID=227873 RepID=A0A0U3P9T9_9HYPH) HSP 1 Score: 250 bits (639), Expect = 1.730e-77 Identity = 122/164 (74.39%), Postives = 139/164 (84.76%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL A LS++ G R+CLVGRNGSGKSTLLKIAAG+I D+GE + G T+RYLPQEPDLS YE+V + AGLAPGDDPYR YLLE LGL G+ DPK+LSGGEARRAALA+ LAP+PDILLLDEPTNHLDLPAIEWLE+EL +RSAIVL+SHDRRFL+NL
Sbjct: 19 PLLTGAELSVSEGDRLCLVGRNGSGKSTLLKIAAGMIEADKGEIFVQPGRTIRYLPQEPDLSAYETVLDYVTAGLAPGDDPYRAPYLLEVLGLTGKEDPKSLSGGEARRAALARTLAPEPDILLLDEPTNHLDLPAIEWLETELKSLRSAIVLISHDRRFLENL 182
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A512IKN3_9HYPH (ATP-binding protein Uup n=3 Tax=Methylobacterium TaxID=407 RepID=A0A512IKN3_9HYPH) HSP 1 Score: 249 bits (635), Expect = 6.940e-77 Identity = 120/164 (73.17%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PL++ A L+I+ G R CLVGRNGSGKSTL+KIAAGL+ PD+GER L G TLRYL QEPDLSG+++V AF AGLAPGDDPYR YL+E+LGL GE DP LSGGEARRAALAQ LAP+PDILLLDEPTNHLDLP IEWLE EL R+A+VL+SHDRRFL L
Sbjct: 20 PLIESAELAISPGERACLVGRNGSGKSTLMKIAAGLVEPDRGERFLQPGTTLRYLAQEPDLSGFDTVLAFVEAGLAPGDDPYRARYLVESLGLTGEEDPSQLSGGEARRAALAQALAPEPDILLLDEPTNHLDLPVIEWLEGELGRTRAALVLISHDRRFLSGL 183
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A258D7L1_9HYPH (Elongation factor 3 (Fragment) n=1 Tax=Rhizobiales bacterium 32-66-8 TaxID=1970550 RepID=A0A258D7L1_9HYPH) HSP 1 Score: 237 bits (604), Expect = 8.510e-77 Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL A LS+ G R+CLVGRNGSGKSTLLK+AAGL+ PD G R GAT+RYLPQEPD G + A+ AG+ GDD YR YLLE LGL G+ +P TLSGGEARRAALA+V+AP+PD+LLLDEPTNHLDLPAIEWLESEL +RSA+V++SHDRRFLQNL
Sbjct: 19 PLLDGAELSVGPGERLCLVGRNGSGKSTLLKVAAGLMEPDSGSRFFQPGATVRYLPQEPDFGGAPTTLAYVEAGMGEGDDAYRALYLLEQLGLTGDENPATLSGGEARRAALARVIAPEPDVLLLDEPTNHLDLPAIEWLESELRSLRSALVVISHDRRFLQNL 182
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A2S6MUE9_9HYPH (ATP-binding protein Uup n=1 Tax=Rhodoblastus sphagnicola TaxID=333368 RepID=A0A2S6MUE9_9HYPH) HSP 1 Score: 248 bits (634), Expect = 9.140e-77 Identity = 121/164 (73.78%), Postives = 134/164 (81.71%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PL+ A LS+ G R+CLVGRNGSGKSTLLKIAAG I PD G R AT+RYLPQEPDLSG+ VH+F AGL P D YR YLL+ALGL G +PK LSGGEARRAALA+ LAPQPDILLLDEPTNHLDLPAIEWLESELAG+RSA+V++SHDRRFLQNL
Sbjct: 19 PLISSADLSVERGDRICLVGRNGSGKSTLLKIAAGEIEPDGGARFFQPDATVRYLPQEPDLSGFPDVHSFVVAGLGPSDADYRAHYLLDALGLTGSENPKNLSGGEARRAALARALAPQPDILLLDEPTNHLDLPAIEWLESELAGLRSALVIISHDRRFLQNL 182
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Match: A0A165YNI7_9HYPH (ATP-binding protein Uup n=23 Tax=Pseudovibrio TaxID=258255 RepID=A0A165YNI7_9HYPH) HSP 1 Score: 248 bits (634), Expect = 1.020e-76 Identity = 121/164 (73.78%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 1 PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGATLRYLPQEPDLSGYESVHAFAAAGLAPGDDPYRVDYLLEALGLRGESDPKTLSGGEARRAALAQVLAPQPDILLLDEPTNHLDLPAIEWLESELAGMRSAIVLVSHDRRFLQNL 492
PLL A L + G R+CLVGRNGSGKSTLLKIAAGL PD+G+ L G T+RYLPQEPDLSGY +V A+A GLAPGDD YR YLLE LGL GE DP+TLSGGEA+RAA+A+ LAP+PDILLLDEPTNHLDLP IEWLESEL M+SAIVL+SHDRRFL+NL
Sbjct: 19 PLLTGAELQVGEGERICLVGRNGSGKSTLLKIAAGLAEPDKGDYFLQPGRTIRYLPQEPDLSGYPTVLAYAEGGLAPGDDQYRAKYLLEILGLTGEEDPETLSGGEAKRAAIARALAPEPDILLLDEPTNHLDLPVIEWLESELKQMKSAIVLISHDRRFLENL 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig644.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig644.6.1 >prot_P-wetherbeei_contig644.6.1 ID=prot_P-wetherbeei_contig644.6.1|Name=mRNA_P-wetherbeei_contig644.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp PLLQQASLSIAAGTRVCLVGRNGSGKSTLLKIAAGLIAPDQGERILSRGAback to top mRNA from alignment at P-wetherbeei_contig644:8627..9118+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig644.6.1 ID=mRNA_P-wetherbeei_contig644.6.1|Name=mRNA_P-wetherbeei_contig644.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig644:8627..9118+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig644:8627..9118+ >mRNA_P-wetherbeei_contig644.6.1 ID=mRNA_P-wetherbeei_contig644.6.1|Name=mRNA_P-wetherbeei_contig644.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig644:8627..9118+ (Phaeothamnion wetherbeei SAG_119_79)back to top |