mRNA_P-wetherbeei_contig6435.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6435.1.1
Unique NamemRNA_P-wetherbeei_contig6435.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: D7FPD4_ECTSI (Protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD4_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 8.120e-63
Identity = 117/239 (48.95%), Postives = 145/239 (60.67%), Query Frame = 1
Query:    1 FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMA-----------------------------------------------------GADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            F +  FLRFP+D   RI ++ FFKHVY S+ LQKT++TLH+YD+EG G+LREQDLENYVYD IPTMP L+++HDNF+PFYVFTAVRRFMFFLDPKRTGKI+ID LVRSR+M+E L++ +A                                                     G   +             D   +  P QDLSKNWFSA++ LRVY EYLELD DQNGMLS++EL+N+
Sbjct:  278 FRSRTFLRFPRDIRARIPSRVFFKHVYESVTLQKTRLTLHFYDSEGLGFLREQDLENYVYDHIPTMPALRAIHDNFYPFYVFTAVRRFMFFLDPKRTGKISIDTLVRSRVMEEFLQVRIAPGEQEEPGYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAATVGGVGTTPSREGAPQGEGGRDDGNNHSPLQDLSKNWFSAESTLRVYGEYLELDEDQNGMLSKQELVNF 516          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A835YRV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV6_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.740e-57
Identity = 100/163 (61.35%), Postives = 122/163 (74.85%), Query Frame = 1
Query:   46 RISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGML 534
            R+S    FKHVYG++CLQKT++TLHYYD EGRG LRE D+ENYVYDLIPT+P L+++ ++F PFYVFTAVRRFMFFLDP+R G+I +  L+RSR+MD+LLELGMA                    S   +PA D+S NWFSA+NALRVY+EYLELD DQNG L
Sbjct:  334 RVSGPLLFKHVYGALCLQKTRVTLHYYDAEGRGALRETDVENYVYDLIPTVPALRAVPESFHPFYVFTAVRRFMFFLDPRRMGRIPVARLIRSRVMDDLLELGMA---------------VGGGGSEGEEPAGDMSGNWFSAENALRVYTEYLELDTDQNGAL 481          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A7R9UCK0_9STRA (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCK0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.180e-50
Identity = 88/185 (47.57%), Postives = 119/185 (64.32%), Query Frame = 1
Query:    7 AAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLEL-GMAGADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            A  FLR P+D  GR+S+Q  F+ ++ + C  +T+  L YYD EG+G+LREQDLENY+YD I  +P+L SM D+F PFYV+TAVRRF+FFLDP+RTG+I++  L  S +M+E  E+  + G DE                       +  ++NWFS +N LRVY+ YLELD DQNGMLS+ E   Y
Sbjct:   99 AREFLRLPRDSKGRVSSQEVFRRIHNTTCSMRTRTQLKYYDAEGKGYLREQDLENYLYDFIDNIPSLASMIDSFLPFYVYTAVRRFVFFLDPRRTGRISVAKLANSAVMEEFYEIVSLDGEDE----------------------VEGAARNWFSLENTLRVYNSYLELDVDQNGMLSKSEFSKY 261          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A7S1UEY0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEY0_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.350e-47
Identity = 89/183 (48.63%), Postives = 120/183 (65.57%), Query Frame = 1
Query:    7 AAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLEL---GMAGADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRE 546
            A  FLR P+D  GR+S+   F+ ++ + C  +T+  L YYD+EGR +LREQDLENY+YD I  +P+L +M ++F PFYV+TAVRRFMFFLDP+RTG+I++  L  S +M+E  E+     AG  ++             DS         L KNWFS +NALRVY+ YLELD DQ+GMLS+RE
Sbjct:  310 AREFLRLPRDAKGRVSSAEVFRRIHNTTCSMRTRTQLRYYDSEGRDFLREQDLENYLYDFIDNIPSLSTMIESFLPFYVYTAVRRFMFFLDPRRTGQISVKRLASSAVMEEFYEIVAVNGAGGSQAPGTGAGGTGASDYDSR--------LYKNWFSLENALRVYNSYLELDEDQSGMLSKRE 484          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A7S4R799_9DINO (Calmodulin n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R799_9DINO)

HSP 1 Score: 167 bits (422), Expect = 2.980e-46
Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQP--AQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            F+ + FL+FP+DR G I+   FF  V   + +++T++ L YYD  G G+LRE+D+EN++++LIPT+P L S+ + F+PFYVFTAVR+F FFLDPKRTGK+ I  L+ S I+ EL EL                           QP   QD   NWFS  +ALRVY  YLELDADQNGMLS+ EL  +
Sbjct:  148 FIPSIFLKFPRDRNGCIAIGPFFMFVVRKVNIRQTRVQLSYYDALGCGYLREKDMENFIFELIPTLPQLDSLQEGFYPFYVFTAVRKFFFFLDPKRTGKLRIRDLLSSSILPELYELRQE------------------------QPLGGQDAENNWFSMQSALRVYGAYLELDADQNGMLSKSELSRF 311          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A7S3W6R9_9SPIT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W6R9_9SPIT)

HSP 1 Score: 159 bits (403), Expect = 3.810e-46
Identity = 85/188 (45.21%), Postives = 117/188 (62.23%), Query Frame = 1
Query:    1 FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQP--AQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            F+ + FL+FP+D+ G I+   FF  V   + +++T++ L +YD  G G+LRE+D+EN++Y+LIPT+P L  + + F+PFYVFTAVR+F FFLDPKRTG+++I  L+ S I+ EL EL                           QP  A +   NWFS  +ALRVY  YLELD DQNGMLS+ EL  Y
Sbjct:   36 FIPSTFLKFPRDQNGCIAIDPFFTFVVRKVNIKQTRVYLSHYDVLGCGYLREKDMENFIYELIPTLPQLNLLQEAFYPFYVFTAVRKFFFFLDPKRTGRVSIRDLLSSPIIIELYELRQE------------------------QPLDASEAESNWFSMQSALRVYGAYLELDVDQNGMLSKNELSRY 199          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A2R5GJ48_9STRA (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ48_9STRA)

HSP 1 Score: 171 bits (432), Expect = 8.810e-46
Identity = 92/186 (49.46%), Postives = 118/186 (63.44%), Query Frame = 1
Query:    1 FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            F A  F +F +D +GRISTQ FF++V   I LQ+T+  L  YD+ G G LREQDLENY+Y+LIP++  L+ + +NF+PFYVFTAVR+F FFLDP++ G+I +  L+ S I+ ELL L  A  DE                        D+  NWFSA N LRVYS+YLELD D NGMLSR E+  Y
Sbjct: 1065 FQADTFCKFRRDDWGRISTQLFFQYVCRHITLQQTRAHLALYDSHGDGCLREQDLENYIYELIPSLEALEDLQENFYPFYVFTAVRKFFFFLDPRKMGRIPLRELITSPILHELLHLQNAPNDE------------------------DIEFNWFSAHNTLRVYSQYLELDIDHNGMLSRAEIQGY 1226          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: W7TMA7_9STRA (Serine threonine-protein phosphatase 2a regulatory subunit b subunit gamma n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMA7_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.300e-45
Identity = 91/189 (48.15%), Postives = 122/189 (64.55%), Query Frame = 1
Query:   16 FLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQP--------AQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            FL+  +D+ GRI+T  FF+H Y  +CL KTKITL +Y+   RG L E DLE YVYDL+ ++P LQ + DNF  FYVFTAVRRFMFFLD KRTG++ +  L+ S++M+EL+ L M  +    XX           ++ +            +  SKNWFS +NALRVY+ YL+LD DQNG+L++ ELL Y
Sbjct:  193 FLQCTRDQHGRINTAEFFRHTYNLMCLLKTKITLLFYNESDRGSLGESDLEGYVYDLVLSLPALQHLPDNFASFYVFTAVRRFMFFLDVKRTGRVDVRHLISSQVMEELMALAMMNSXXXXXXQSPFPAAHGARAASEEASFASECSRWQERASKNWFSTENALRVYNMYLDLDRDQNGLLNKIELLRY 381          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A7S2R8D6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R8D6_9STRA)

HSP 1 Score: 164 bits (415), Expect = 5.350e-45
Identity = 91/186 (48.92%), Postives = 115/186 (61.83%), Query Frame = 1
Query:    1 FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            F    F +F +D +GRIS Q FF++V   + LQ+ +I L+ YDT G G LREQDLENY+Y+LIP++  L  + +NF+PFYVFTAVR+F FFLDPK T KI I  LV S I+ ELL L                     +   D + A     NWFS+ N LRVYS+YLELD D+NGMLSR E+  Y
Sbjct:  176 FTPRVFSKFRRDEWGRISVQFFFQYVCRIVNLQRNRIQLYVYDTHGDGCLREQDLENYIYELIPSLHALVDLQENFYPFYVFTAVRKFFFFLDPKHTCKIPIRDLVTSSILHELLHL------------------QTYNDEMDREEADQF--NWFSSHNTLRVYSQYLELDVDRNGMLSRSEIAGY 341          
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Match: A0A813A215_SYMMI (Calmodulin (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813A215_SYMMI)

HSP 1 Score: 160 bits (406), Expect = 7.850e-45
Identity = 83/186 (44.62%), Postives = 116/186 (62.37%), Query Frame = 1
Query:    1 FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWLREQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKIAIDVLVRSRIMDELLELGMAGADESGXXXXXXXXXXXXDSSPDVQPAQDLSKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY 558
            FL + +L+FP+D+ G I+   FF  V   + L++T++ L YYD  G G+LRE+D+EN+++++IPT+P L S+ + F+PFYVFTAVR+F FFLDPKRTG++ I  L+ S+I+ EL EL                           QP  D   NWFS  +AL+VY  YL LD DQNGMLS+ EL  +
Sbjct:   43 FLPSTYLKFPRDQSGCIAIVPFFTFVVRKVNLRQTRVQLSYYDALGCGFLREKDMENFIFEMIPTLPQLNSLTEEFYPFYVFTAVRKFFFFLDPKRTGRVRIRDLLSSQILPELYELRQE------------------------QPLADAELNWFSTQSALKVYGAYLFLDVDQNGMLSKTELSRF 204          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6435.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPD4_ECTSI8.120e-6348.95Protein phosphatase 2A regulatory subunit n=1 Tax=... [more]
A0A835YRV6_9STRA3.740e-5761.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UCK0_9STRA4.180e-5047.57Serine/threonine-protein phosphatase 2A regulatory... [more]
A0A7S1UEY0_9STRA4.350e-4748.63Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4R799_9DINO2.980e-4647.34Calmodulin n=3 Tax=Alexandrium monilatum TaxID=311... [more]
A0A7S3W6R9_9SPIT3.810e-4645.21Serine/threonine-protein phosphatase 2A regulatory... [more]
A0A2R5GJ48_9STRA8.810e-4649.46Serine/threonine-protein phosphatase 2A regulatory... [more]
W7TMA7_9STRA1.300e-4548.15Serine threonine-protein phosphatase 2a regulatory... [more]
A0A7S2R8D6_9STRA5.350e-4548.92Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A813A215_SYMMI7.850e-4544.62Calmodulin (Fragment) n=2 Tax=Symbiodinium TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6435contigP-wetherbeei_contig6435:1319..3140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FPD4
Preferred namePPP2R3C
PFAMsEF-hand_7
Model size558
Max annot lvl2759|Eukaryota
KEGG koko:K11583
KEGG Pathwayko03015,ko04071,ko04151,ko04152,ko04261,ko04728,ko05165,map03015,map04071,map04151,map04152,map04261,map04728,map05165
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0000911,GO:0000913,GO:0001776,GO:0001782,GO:0001932,GO:0001934,GO:0002260,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002759,GO:0002831,GO:0002920,GO:0003254,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007275,GO:0008104,GO:0008150,GO:0009524,GO:0009653,GO:0009790,GO:0009792,GO:0009826,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0015630,GO:0016043,GO:0016049,GO:0019220,GO:0019222,GO:0019899,GO:0019902,GO:0019903,GO:0022402,GO:0022607,GO:0030865,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032101,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032506,GO:0032989,GO:0033036,GO:0033365,GO:0033674,GO:0034613,GO:0040007,GO:0042325,GO:0042327,GO:0042391,GO:0042592,GO:0043029,GO:0043085,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043549,GO:0043900,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045577,GO:0045579,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045859,GO:0045860,GO:0045937,GO:0048285,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048536,GO:0048583,GO:0048589,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050776,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0051094,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051301,GO:0051338,GO:0051347,GO:0051641,GO:0051721,GO:0051881,GO:0051900,GO:0060255,GO:0060560,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070925,GO:0071840,GO:0080090,GO:0090307,GO:0140014,GO:1902105,GO:1902107,GO:1902410,GO:1902850,GO:1903047,GO:1903706,GO:1903708,GO:2000026
Exons4
Evalue1.33e-63
EggNOG OGsKOG2562@1|root,KOG2562@2759|Eukaryota
Descriptionpositive regulation of B cell differentiation
Cds size558
COG categoryL
BRITEko00000,ko00001,ko01009,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186913.4137514-CDS-P-wetherbeei_contig6435:1318..14371683186913.4137514-CDS-P-wetherbeei_contig6435:1318..1437Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6435 1319..1437 +
1683186913.4258242-CDS-P-wetherbeei_contig6435:1910..20831683186913.4258242-CDS-P-wetherbeei_contig6435:1910..2083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6435 1911..2083 +
1683186913.435719-CDS-P-wetherbeei_contig6435:2627..28331683186913.435719-CDS-P-wetherbeei_contig6435:2627..2833Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6435 2628..2833 +
1683186913.445421-CDS-P-wetherbeei_contig6435:3080..31401683186913.445421-CDS-P-wetherbeei_contig6435:3080..3140Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6435 3081..3140 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6435.1.1prot_P-wetherbeei_contig6435.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6435 1319..3140 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6435.1.1

>prot_P-wetherbeei_contig6435.1.1 ID=prot_P-wetherbeei_contig6435.1.1|Name=mRNA_P-wetherbeei_contig6435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp
FLAAAFLRFPQDRFGRISTQNFFKHVYGSICLQKTKITLHYYDTEGRGWL
REQDLENYVYDLIPTMPTLQSMHDNFFPFYVFTAVRRFMFFLDPKRTGKI
AIDVLVRSRIMDELLELGMAGADESGGGGNGGGGGGGSDSSPDVQPAQDL
SKNWFSADNALRVYSEYLELDADQNGMLSRRELLNY
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mRNA from alignment at P-wetherbeei_contig6435:1319..3140+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6435.1.1 ID=mRNA_P-wetherbeei_contig6435.1.1|Name=mRNA_P-wetherbeei_contig6435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1822bp|location=Sequence derived from alignment at P-wetherbeei_contig6435:1319..3140+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTTGGCGGCGGCGTTCCTGCGTTTCCCGCAGGACCGCTTCGGCCGCAT CTCCACGCAGAACTTCTTCAAGCACGTCTACGGCAGCATCTGCCTGCAGA AAACTAAGATCACCCTCCAGTGAGTAGGATTCTTTTGCTTCAAGAAGAAA ACTTTGATTACATTCGTAGAAATCACCCGTCGCTCCGCCGCCTGTGTAGT CTTACTTAAAGTTTGATATGCATGACAGGACGCGAGCACTGACTTCCTTC CGCAATTGCTCATGGCCTGAAAATGATGACCGTCGGCGACGGACCGAACG ACGGCTGGCTGGCGGCGACGGTGATGTGACTGGCTCTGTTGCGATGGCTG TTCTGGGCGGTGGTTGACTTGTGACGGGCGCATTTGGCTCCTCGGCTGGA CTTCGTTCGACCCTGGGATGACCTGAATTGTGCGCTGGCGGCCTGCTCTC GACGTTCCGTGGGTTCTCCGAATGTACGGCGCTACGTTGTACTGCGATGT GCTCCGGACGCCCCGCGGCGCTCCTCTGAATGCCTGGCGCTGTGCTGCAC TGCGCTGTGCTGTGATGTGCGGGCTGCTCTACCCTGCGGCAGCTACTACG ACACAGAGGGCAGGGGGTGGCTGCGGGAGCAGGACCTCGAGAACTACGTC TACGACCTAATCCCCACCATGCCCACCCTGCAGAGCATGCACGACAATTT CTTCCCGTTTTACGTCTTCACCGCCGTCCGACGATTCATGTTCTTCCTCG ACCCCAAACGCACCGGTGAGGCAAGGGGAACGGGCGGGAAATGGTAGAGA AGAGGGAAGAGAGAGGGAAGAGAGAAGGAAGGGAATACAGAGGAAAGAGA GGGCAGGGATGGGGAGGAAGGAAGCCCAGGCCGGTGAGAGGAACTGGCTG GCAACCAGCCTGCCCCCGCCGCCTGCTTACTTGTTCTAAGGCGGTGTATC ATGTCGCTTGCATCCAAAGTAGAAAGCCGGTGGATACATCGAAAAGGTCG CATGGCATCGTTCTTTGCCGCCGCGTCTGCTGCCGCTGCGGTAGACGACG CCTCGCGGCCCTTCTGACGCGGCCGCTGGCTTTTAACATCCACAGCAGCG GGGAGGTCGTAAACCCAAGACGTTTGGCCGAGACCATGTGCGAGGACGCT AGGCGATTGAGAAAATAGCATCGTTGGGTTCTGCTTTCTCGCTATGCAGC GGCGCAACCAAAGAAGTTTGGAGGCGGCAGCGTTGCAACGCACCTACCAT TGCACCATCTTTCCCCAAACATGGCGGCACGTCTATCTCCTTCCCCGGGA AATTTCCAGGCAAGATCGCGATCGATGTGCTGGTCCGCAGTCGTATCATG GACGAGCTTTTGGAGCTCGGCATGGCGGGTGCAGACGAAAGCGGCGGCGG CGGTAATGGCGGCGGCGGCGGCGGCGGCAGCGACTCGTCCCCCGATGTCC AGCCGGCACAGGACCTTAGCAAGAACTGGTTCTCCGCGGATAACGCACTC CGGGTGTACAGCGAGGTACGTGCGAATAAGACGCCTCTCTATGTCTGTGT TTTGGCGGCTGTGGTTTCATCAAGGCTTTGCATACGCCCCACTTTGAACC CGAGGGCCGTCCCGCCGCTTCTGCCGGCTTTCCACACCTTACGTTTGTTT AAAAATGTAAACCGTGTCAGCCTTCCGCTTACCCAATCTGCGTTCCGTCG CTGCCGCCCCGGTGTCTTCCACTGCACACTGTCCCGCTGCCGTTGCCGTC CACCCGCCGCAGTACCTGGAGCTGGACGCGGACCAGAACGGCATGCTGAG CCGCCGCGAGCTCCTCAACTAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6435:1319..3140+

>mRNA_P-wetherbeei_contig6435.1.1 ID=mRNA_P-wetherbeei_contig6435.1.1|Name=mRNA_P-wetherbeei_contig6435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=558bp|location=Sequence derived from alignment at P-wetherbeei_contig6435:1319..3140+ (Phaeothamnion wetherbeei SAG_119_79)
TTCTTGGCGGCGGCGTTCCTGCGTTTCCCGCAGGACCGCTTCGGCCGCAT
CTCCACGCAGAACTTCTTCAAGCACGTCTACGGCAGCATCTGCCTGCAGA
AAACTAAGATCACCCTCCACTACTACGACACAGAGGGCAGGGGGTGGCTG
CGGGAGCAGGACCTCGAGAACTACGTCTACGACCTAATCCCCACCATGCC
CACCCTGCAGAGCATGCACGACAATTTCTTCCCGTTTTACGTCTTCACCG
CCGTCCGACGATTCATGTTCTTCCTCGACCCCAAACGCACCGGCAAGATC
GCGATCGATGTGCTGGTCCGCAGTCGTATCATGGACGAGCTTTTGGAGCT
CGGCATGGCGGGTGCAGACGAAAGCGGCGGCGGCGGTAATGGCGGCGGCG
GCGGCGGCGGCAGCGACTCGTCCCCCGATGTCCAGCCGGCACAGGACCTT
AGCAAGAACTGGTTCTCCGCGGATAACGCACTCCGGGTGTACAGCGAGTA
CCTGGAGCTGGACGCGGACCAGAACGGCATGCTGAGCCGCCGCGAGCTCC
TCAACTAC
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