mRNA_P-wetherbeei_contig6433.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI) HSP 1 Score: 204 bits (519), Expect = 6.320e-53 Identity = 128/295 (43.39%), Postives = 175/295 (59.32%), Query Frame = 1
Query: 817 PVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGL--DA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVKRHFEQIKKLSE 1686
PVDTAPALEDC+P+ INE TRWKP ++ +A VL +A ILNKMTLEKF+ LS F+ +V ++ + VS V+ +V KAQME HFSSMYA+LC R+AR+P+ GL DA D++KG+KKFRKMLL Q EFE+D AV+ + +L DE+ E E ++++YTGHMRF+GELYK ELL+ KHV AA+ ++ G E DEERLEC ++L+ T GK ++ T D VK +KR F+++ K+++
Sbjct: 264 PVDTAPALEDCKPIEINEATRWKPKSLETTGKAEDKLPTEK----------------------------------VLMKANAILNKMTLEKFDKLSVTFM-DVGLRDPKVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQSDSTLADDEKAEKEFGLKRKYTGHMRFVGELYKVELLKEKHVHAAIHDMF--------GNADEPDEERLECMVKLLQTCGKKLDHTGSP-DIVKDMKRLFKRVGKVAD 514
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE) HSP 1 Score: 203 bits (516), Expect = 1.290e-52 Identity = 130/298 (43.62%), Postives = 176/298 (59.06%), Query Frame = 1
Query: 817 PVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNK---MTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGL--DA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVKRHFEQIKKLSE 1686
PVDTAPALEDC+P+ INE TRWKP ++ K +A VL +A ILNK MTLEKF+ LS F+ +V ++ E VS V+ +V KAQME HFSSMYA+LC R+AR+P+ GL DA D++KG+KKFRKMLL Q EFE+D AV+ + +L DE+ E E ++++YTGHMRF+GELYK ELL+ KHV AA+ ++ G E DEERLEC ++L+ T GK ++ T D VK +KR F+++ K+++
Sbjct: 231 PVDTAPALEDCKPIEINEATRWKPKSLKAKDKAEDELPTEE----------------------------------VLMKANAILNKARMMTLEKFDKLSVTFM-DVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQSDSTLAEDEKAEKEFGLKRKYTGHMRFVGELYKVELLKEKHVHAAIHDMF--------GNADEPDEERLECMVKLLQTCGKKLDQTGSP-DIVKDMKRLFKRVGKVAD 484
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A836CBQ1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ1_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.200e-47 Identity = 117/275 (42.55%), Postives = 162/275 (58.91%), Query Frame = 1
Query: 862 INEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVKRHFEQIKKLSE 1686
+NE TRWK ++L++ EA A L A AE +++RRA +LNKMTLEKF+ LS +F T+V E V +++++V KAQME HF+ MYA+LCLRL+ + +P D+ G K FRKMLLE CQ EF +D +Q +K + SL +E+ E EL +++RYTGHMRF+GELYK LL+ K+V +++ L G DEE+LEC ++LM+TVG ME D VK KR+F++IKKLSE
Sbjct: 31 VNEGTRWKAKHMLEEEEA--------------------------AKLEAA----AEDPEIIMRRAIALLNKMTLEKFDKLSAQF-TDVGFTTVELVDRIISSLVEKAQMEAHFAPMYAKLCLRLSEAQLPAF-RDAKNGPKMFRKMLLEHCQEEFGKDTADIIQGIKSDSSLTPEEQAERELIVKRRYTGHMRFVGELYKVGLLKEKYVHLSIEELLGMEEDGNVMP----DEEKLECMVKLMSTVGAQMEQHPSSPDFVKNFKRYFKRIKKLSE 269
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: B8BXR3_THAPS (Eukaryotic translation initiation factor eIF4G (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXR3_THAPS) HSP 1 Score: 175 bits (444), Expect = 8.630e-47 Identity = 107/281 (38.08%), Postives = 164/281 (58.36%), Query Frame = 1
Query: 811 RKPVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQD-KDTVKVV 1650
+ P DTAP LEDC+P+ +NEETRWK + V + E A A G +++ V+R+A ILNK++L KF+ LS EF+ ++ E ++E V+ +V KAQ E+HFSSMYA LCL+LA +P G+D DS K KKF+K+LL+ CQ EFE + A+++A ++ + D +E +++ Y GHMRFIGELYK +++ +K + L L G A +DEE++EC+ +LMT +G ++E ++ K TV+++
Sbjct: 10 KNPNDTAPLLEDCKPIEVNEETRWK-AKVFEGKEGE----------------------------AAAVTEGEDSKEEVIRKALLILNKLSLTKFDKLSDEFINCGIGRDVECLTEAVSLIVNKAQEEQHFSSMYAGLCLKLAGTPFEGIDDDSGKKGKKFKKILLQRCQDEFETETSAKIEAATKDIT-DEEEIAYHANLLKKHYLGHMRFIGELYKGDMISIKIMLFCLPQLLMGE------APKTVDEEKIECFAKLMTVIGSSLEQQSEAMKSTVEIM 254
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S2KXG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KXG3_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.510e-42 Identity = 102/271 (37.64%), Postives = 157/271 (57.93%), Query Frame = 1
Query: 817 PVDTAPALEDCEPLTINEETRWKPSNVL-KKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQ 1626
P DTAPALEDC+PL +NEETRWK + K+ EA E++ +LRRA ILNK++L KF+ LS F+ ++ + ++ V +V KAQ E+HF+SMYA LCL+++++PM G+D + KG KKF+K+LLE CQ EFE D +++ + G DA+E I++ Y GHMRFIGELY +L+ ++ + L TL +G + +G ++DEE++EC+ +L+T +G ++E ++
Sbjct: 283 PNDTAPALEDCKPLQVNEETRWKAKVFVGKEGEADEDE-------------------------------AVESKEEILRRALLILNKLSLTKFDKLSDAFINCGIGRDIDCLTGAVGMIVNKAQEEQHFASMYAGLCLKMSKTPMEGIDEGTKKG-KKFKKILLERCQSEFETDAATKVKEATK-GITDAEEIEYHTNLIKKHYLGHMRFIGELYNGDLISIRIMLFCLPTLLKGESDDSSG---DVDEEKIECFAKLITVIGSSLEQQSE 517
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: K0RPP6_THAOC (MI domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RPP6_THAOC) HSP 1 Score: 170 bits (430), Expect = 2.920e-41 Identity = 104/268 (38.81%), Postives = 151/268 (56.34%), Query Frame = 1
Query: 823 DTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQ 1626
DTAPALEDC+PL +N++TRWK + K E G + + +LR+A ILNK++L KF+ LS F+ ++ + ++ V +VTKAQ E+HF+SMYA LCL+LA +PM G+D S KG KKF+K+LLE CQ EFE+D ++ E G D D I++ Y GHMRFIGELYK +LL +K + L +L +G + E+DEE++EC+ +LMT +G ++E ++
Sbjct: 278 DTAPALEDCKPLEVNDDTRWKAK--VFKGEGGAESGE-----------------------------GDDGKDEILRKAMLILNKLSLTKFDKLSNAFIDCGIGRDIDCLTGAVEMIVTKAQEEQHFASMYASLCLKLASTPMEGMDEGSKKG-KKFKKILLERCQTEFEKDAATKIAEATE-GITDKDLIEYHSTLIKKHYLGHMRFIGELYKCDLLSIKIILFCLPSLLKGDSEHS----DEVDEEKVECFSKLMTVIGSSLEQQSE 508
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S4VDN4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDN4_9STRA) HSP 1 Score: 166 bits (421), Expect = 5.320e-41 Identity = 104/285 (36.49%), Postives = 157/285 (55.09%), Query Frame = 1
Query: 811 RKPVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMEL-KIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEE------------RLECYIRLMTTVGKTMES 1617
++ V+TAP LE+C+PL +N++TRWK +NV K + ++ ALVL++A ILNK++L KF+ LS +F+ +N+E + ++ +V KAQ E HFS+MYA LCL+LAR+P G++ S+K KKF+KMLL CQ EFE+D ++Q E +D DE E E K+++ Y GHMRFIGELYK +L+ +K + L L EG T E D+ ++EC+ +LMT +G+++E+
Sbjct: 264 KRVVETAPPLEECKPLEVNDDTRWK-ANVFDKEKKTEEDE--------------------------------QSDALVLKKAFVILNKLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGIEEPSKSSSKKGKKFKKMLLSRCQEEFEQDTATKVQKATEG--IDDDEEKEYEANKVKKHYLGHMRFIGELYKGDLISIKIMLLCLPALLEGETTPQKPKEEGDDQXXXXXXXXXXXXXKVECFAKLMTVIGQSLEA 513
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S4S9Z9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9Z9_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.490e-40 Identity = 104/285 (36.49%), Postives = 157/285 (55.09%), Query Frame = 1
Query: 811 RKPVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMEL-KIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEE------------RLECYIRLMTTVGKTMES 1617
++ V+TAP LE+C+PL +N++TRWK +NV K + ++ ALVL++A ILNK++L KF+ LS +F+ +N+E + ++ +V KAQ E HFS+MYA LCL+LAR+P G++ S+K KKF+KMLL CQ EFE+D ++Q E +D DE E E K+++ Y GHMRFIGELYK +L+ +K + L L EG T E D+ ++EC+ +LMT +G+++E+
Sbjct: 264 KRVVETAPPLEECKPLEVNDDTRWK-ANVFDKEKKTEEDE--------------------------------QSDALVLKKAFVILNKLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGIEEPSKSSSKKGKKFKKMLLSRCQEEFEQDTATKVQKATEG--IDDDEEKEYEANKVKKHYLGHMRFIGELYKGDLISIKIMLLCLPALLEGETTPQKPKEEGDDQXXXXXXXXXXXXXKVECFAKLMTVIGQSLEA 513
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S1ZM64_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM64_TRICV) HSP 1 Score: 155 bits (393), Expect = 9.710e-39 Identity = 90/210 (42.86%), Postives = 129/210 (61.43%), Query Frame = 1
Query: 1042 VLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGT-------------GAES--ELDEERLECYIRLMTTVGKTMESTTQ 1626
+L++A ILNK++L KF+ LS F+ + T+ V +V KAQ E HFS+MYA LCL+LAR+P+P L+ S K KKF+KMLLE CQ EFE+D ++Q E G D +ER + +++ Y HMRFIGELYK +L+ +K + L L EG T T GA+S E+DEE++EC+ +LMTT+G ++E ++
Sbjct: 19 ILKKALLILNKLSLTKFDKLSDAFIDTGIGLRESTLHGAVGLIVKKAQDEPHFSAMYAGLCLKLARTPLP-LEEGSTKKGKKFKKMLLERCQEEFEQDTATKIQLAIE-GVEDKEEREQKAALVKKHYLSHMRFIGELYKGDLISIKIILFCLPALLEGETFSATEEKKDAEAEEEDDGADSDDEVDEEKVECFAKLMTTIGSSLEQQSE 226
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S2KBC3_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBC3_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.770e-38 Identity = 104/277 (37.55%), Postives = 158/277 (57.04%), Query Frame = 1
Query: 823 DTAPALEDCEPLTINEETRWKPSNVLK---KAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSA-KGAKKFRKMLLESCQLEFERDVGAEL-QAVKENGSLDADERTEMELK---IRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAE-SELDEERLECYIRLMTTVGKTMESTTQ 1626
DTAP LE+C PL N+ETRWK + V K K E E ++++RA LNK+TL KF+++S +F+ +NQE ++E ++ +V+KAQ E HF++MYA LCL+LA +PM ++A K KKF+K+LLE CQ+EFE+D + +AVK D ++ E E + I++ Y GHM+FIGELYK +LL +K + L L +G +G E + +DEE++EC+ +LMTT+G+ +E ++
Sbjct: 212 DTAPPLEECVPLEKNDETRWK-AKVFKGEFKEE--------------------------------------ETDEVIMKRALFCLNKLTLTKFDVVSDKFIETGIGRNQECLTEAISLIVSKAQGEPHFAAMYASLCLKLAITPMEATGEEAANKRGKKFKKLLLERCQVEFEKDTNEVIAEAVK-----DVEDEAEKEYQAGIIKKNYLGHMQFIGELYKGDLLSIKIMLVCLPELLQG-----SGDEKNSVDEEKVECFTKLMTTIGERLEHQSE 439 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6433.1.2 >prot_P-wetherbeei_contig6433.1.2 ID=prot_P-wetherbeei_contig6433.1.2|Name=mRNA_P-wetherbeei_contig6433.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=511bp MSTAHLNPEAPAWVPKEPIPLARAADAGAAKDAVITFGDVDTAPATWESIback to top mRNA from alignment at P-wetherbeei_contig6433:3..3020- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6433.1.2 ID=mRNA_P-wetherbeei_contig6433.1.2|Name=mRNA_P-wetherbeei_contig6433.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3018bp|location=Sequence derived from alignment at P-wetherbeei_contig6433:3..3020- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6433:3..3020- >mRNA_P-wetherbeei_contig6433.1.2 ID=mRNA_P-wetherbeei_contig6433.1.2|Name=mRNA_P-wetherbeei_contig6433.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1533bp|location=Sequence derived from alignment at P-wetherbeei_contig6433:3..3020- (Phaeothamnion wetherbeei SAG_119_79)back to top |