mRNA_P-wetherbeei_contig6422.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A836CAV3_9STRA (Leo1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV3_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.000e-36 Identity = 86/227 (37.89%), Postives = 125/227 (55.07%), Query Frame = 2
Query: 2024 LRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAEREAEDFAYAQNVIR----------WRHRCDGAGKVELGPDGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRSDAAASQRGRGVMTTDNLADPEALKRERIVAEEEARKHERRR 2674
+ IP L RP ++V+V ++P +G++ FDP TFD E E F + N+IR WRHR D +G +E G P+ ETNTRLVKW DG++QL++G + +DV+ D++++FV K +CLECQGRL K+ FKP G L SKAH+++A VR+ +Q+ +M+ DPEA+K +R+ EE RK E+RR
Sbjct: 89 IEIPELQRPTPASKVYVTRMPNVMGIKTAPFDPNTFDQVAEDETFKFTTNIIRQAYFNSLTLEWRHRKDASGALEYDEHGEPIRETNTRLVKWSDGSLQLMVGEEVFDVSEHALDKSYMFVRQKTTE----------------------GTSCLECQGRLDNKLTFKPSG-LHSKAHRSLALAVRTR---TQKASRIMSYSETMDPEAVKTQRVRTEEGTRKREKRR 289
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A448YW85_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW85_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.730e-16 Identity = 69/226 (30.53%), Postives = 107/226 (47.35%), Query Frame = 2
Query: 2030 IPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAEREAEDF-AYAQNVIRWRHRCDGAGKVELGPDGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLF------VHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRSDAAASQRGRGVMTTDNLADPEALKRERIVAEEEARKHERRRRCVG 2686
+PS +P+ G + + KLP + +Q AFD + +D + E E + Y N+IRWR++ D G G + E+NT+LVKW DG+ L IG +A+D+ + F V+ AT +T T LEC G + + KP L S++H+++ VR + MT + DPE LK+ERI E+A ++R+R G
Sbjct: 143 VPSAGKPQEGCSLHMTKLPNVVAIQPSAFDEVDYDEKEEEETYKGYVHNMIRWRYKKDDNGNPMRDERGL-IRESNTKLVKWSDGSFTLHIGKEAFDIQNVDSSTGSGFSGLNGYVYQSQKATFQTDENDSDNDDEDDLQN---GGTVLECIGPVGSRFVAKPSS-LQSESHKSLTVAVRQRTVKRAKIAQYMTEE---DPEKLKQERIKYNEDAXXXKQRKRATG 360
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A6G0WUF6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUF6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.080e-15 Identity = 56/180 (31.11%), Postives = 91/180 (50.56%), Query Frame = 2
Query: 2018 DRLRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAEREAE-DFAYAQNVIRWRHRCDGAGKVELGP-DGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRS 2551
D L+IP P+ G+E+F + P L AF + E+E D +N +RWR++ DG G++ + P G PV E+N+R+VKWDDG+ + +GG+A + Q +F+FV+ ++ T ET LEC GR+ K+ +P S +HQ++ +R+
Sbjct: 114 DELQIPKGPKAPRGSELFFTRPPNVLRFVPDAFTSESIKKEKEETGDEGIYRNYVRWRYKLDGNGRIMVDPKSGLPVRESNSRIVKWDDGSYTMFVGGEALTLTQQRVANSFVFVNEQS--TDETV---------------------LECHGRVQSKLTIRPIS-TQSSSHQSLKMSMRA 269
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A2R5G957_9STRA (RNA polymerase-associated protein LEO1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G957_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.440e-15 Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 2
Query: 2024 LRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAERE-------AEDFAYAQNVIRWRHRCDGAGKVELGPDGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRS 2551
+R+P + RP AE+ +A+LP + +++ A+D +D E+E + F + N+IRWR++ + ++E DG PVIE+N+R V+W DG++QL IG + +DV + FLF + GE A CLE G + ++ +P ++S AHQ++ V+S
Sbjct: 100 VRVPPIVRPADDAEIGLARLPNSMHVESTAYDGSLYDEEKEQVRLRRLGKGFVH-DNIIRWRYKMNDRREIEK-KDGKPVIESNSRFVEWSDGSVQLYIGDEVFDVVKKRPHNQFLFSMGIDERDGE-------------------AFNCLESCGLIDSSLSMRPTS-ISSAAHQDMELRVKS 260
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A1W0A835_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A835_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.310e-14 Identity = 53/180 (29.44%), Postives = 86/180 (47.78%), Query Frame = 2
Query: 2018 DRLRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAEREAE-DFAYAQNVIRWRHRCDGAGKVELGPD-GAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRS 2551
D L+IP P+ + E F + P L A+ + E+E D +N +RWR+ D G V++ + G P E+NTR+VKW+DGT + +G +A + Q +F+FV+ ++ T ET LEC GR+ K+ +P TS +HQ++ +R+
Sbjct: 76 DELQIPKAPKAKMNTEYFFTRPPNILRFVPEAYTKSSIQKEKEETGDEGLYRNYVRWRYATDANGNVQIDSNTGLPKRESNTRIVKWEDGTYTMFVGEEALTLTKQKVANSFIFVNEQS--TDETV---------------------LECHGRVAHKLTIRPNA-TTSSSHQSLTMSMRA 231
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: F0WET4_9STRA (Uncharacterized protein AlNc14C77G5134 n=2 Tax=Albugo TaxID=65356 RepID=F0WET4_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.960e-13 Identity = 53/180 (29.44%), Postives = 89/180 (49.44%), Query Frame = 2
Query: 2018 DRLRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAER-EAEDFAYAQNVIRWRHRCDGAGKVELGP-DGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRS 2551
++L +P P+P S A+ FV K+P L + + + E D +N +RWR+R D G + + P P+ ETN+++V+W+DGT+ L +G +A +A Q +FLFV+ E + T LEC GRL K+ +P +SK+H+++ +R+
Sbjct: 110 NQLWLPRTPKPSSTAKCFVTKMPNILRLIPEPYTEESIQEEMINPTDETLYRNYVRWRYRRDEKGALVMDPITHHPLRETNSKVVRWEDGTLTLFVGREALYLARQKIANSFLFVN-------EVSLNEKAFQNNKVEDNATGQKTVLECHGRLDEKLTIRPMT-TSSKSHKSLTMSMRA 281
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: E1Z4X2_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z4X2_CHLVA) HSP 1 Score: 82.4 bits (202), Expect = 1.160e-12 Identity = 70/225 (31.11%), Postives = 96/225 (42.67%), Query Frame = 2
Query: 2006 VQPRDRLRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDA--EREAEDFAYA------QNVIRWRHRCDGAGKVELGPDGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAV--QPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRSDAAASQRGRGVMTTDNLADPEALKRERIVAEEE 2650
VQP+D LR+ KLP LG++AR FDP TFDA E E ++ + QN IRWR D +G V E+N R V+W DG++QL++G + DV N+ ++ V + G QG+L RKM F+P L S H+ + +QR V T L DP+ LK E+ AE E
Sbjct: 97 VQPQDSLRL--------------VKLPNILGVEARPFDPDTFDAGAEEEVDERGFKRVRLRDQNCIRWRWGVD--------EEGNQVRESNARFVRWSDGSLQLVVGDEVMDVKEIDTTNEHTYMCVRLPGLIQG---------------------------QGQLTRKMVFQPAS-LQSNLHKQLRAAADKLHVKTQR---VRATTTLVDPKKLKAEQERAEAE 268
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A1V9YIV6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIV6_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.950e-12 Identity = 54/180 (30.00%), Postives = 82/180 (45.56%), Query Frame = 2
Query: 2018 DRLRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAEREAE-DFAYAQNVIRWRHRCDGAGKVELGP-DGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRS 2551
D LRIP + E F + P L A+ + E+E D +N +RWR+ D G V + G P E+NTRLVKW+DGT + +G +A + Q +F+FV+ ++ T E T LEC GR+ K+ +P TS +HQ++ +R+
Sbjct: 89 DELRIPKAAKAPKNTEFFFTRPPNILRFVPEAYTKASIAKEKEETGDEGLYRNYVRWRYAVDANGSVIVDQATGLPKRESNTRLVKWEDGTYTMFVGEEALTLTQQKVANSFIFVNEQS--TDEM-------------NQQSTDETVLECHGRVANKLTIRPIA-TTSSSHQSLKMSMRA 252
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A067BZN3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZN3_SAPPC) HSP 1 Score: 78.6 bits (192), Expect = 1.490e-11 Identity = 51/180 (28.33%), Postives = 83/180 (46.11%), Query Frame = 2
Query: 2018 DRLRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTFDAEREAE-DFAYAQNVIRWRHRCDGAGKVELGP-DGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQPNDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRS 2551
D L IP + + + F + P L A+ + E+E D +N +RWR+ D G V + P G P E+NTR+VKW+DGT + +G +A + Q +F+F + ++ T ET LEC GR+ +K+ +P TS +HQ++ +R+
Sbjct: 85 DELHIPKAAKAPTNTDYFFTRPPNILRFVPDAYTQASIQKEKEETGDEGLYRNYVRWRYATDADGNVLVDPATGRPKRESNTRIVKWEDGTYTMFVGDEALTLTQQKVANSFIFANEQS--TDETV---------------------LECHGRVSKKLTIRPIA-TTSSSHQSLKMSMRA 240
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Match: A0A540MMI8_MALBA (Uncharacterized protein n=13 Tax=Maleae TaxID=721813 RepID=A0A540MMI8_MALBA) HSP 1 Score: 79.3 bits (194), Expect = 2.010e-11 Identity = 65/232 (28.02%), Postives = 100/232 (43.10%), Query Frame = 2
Query: 2009 QPRDR-------LRIPSLPRPRSGAEVFVAKLPKFLGMQARAFDPMTF--------DAEREAEDFAYAQNVIRWRHRCDGAGKVELGPDGAPVIETNTRLVKWDDGTMQLIIGGDAWDVAVQP--NDRAFLFVHHKNIATGETAXXXXXXXXXXXXXXXXAANTCLECQGRLPRKMAFKPGGGLTSKAHQNVATLVRSDAAASQRGRGVMTTDNLA---DPEALKRERIVAE 2644
+PRD+ L IP P P ++ + K+ +G+ + FDP T+ D + N++RW+ PDG E+NTR V+W DG++QL+IG + D++VQ +D+A LF+ H+ L+ QG++ +KM F P LTS +H+ + LV S R + V N DPE K E+ AE
Sbjct: 223 KPRDKPVGPPLELEIPLRPPPARPEKMNMIKVSNIMGIDPKPFDPKTYVEEDTFVTDESGSKKRIRLENNIVRWKR--------VRNPDGTTTSESNTRFVRWSDGSLQLLIGNEVLDISVQEAQHDQAHLFLRHEK--------------------------GILQSQGKVLKKMRFMPSS-LTSNSHRLLTALVDS------RHKKVYKVKNCVTDIDPEREKEEKERAE 413 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6422.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6422.1.1 >prot_P-wetherbeei_contig6422.1.1 ID=prot_P-wetherbeei_contig6422.1.1|Name=mRNA_P-wetherbeei_contig6422.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=503bp MSNSESDAGVSNTDAAPRRKTVQSDSDSESDRHSVKKPDESDGNDGDLSSback to top mRNA from alignment at P-wetherbeei_contig6422:93..3314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6422.1.1 ID=mRNA_P-wetherbeei_contig6422.1.1|Name=mRNA_P-wetherbeei_contig6422.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3222bp|location=Sequence derived from alignment at P-wetherbeei_contig6422:93..3314+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6422:93..3314+ >mRNA_P-wetherbeei_contig6422.1.1 ID=mRNA_P-wetherbeei_contig6422.1.1|Name=mRNA_P-wetherbeei_contig6422.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1509bp|location=Sequence derived from alignment at P-wetherbeei_contig6422:93..3314+ (Phaeothamnion wetherbeei SAG_119_79)back to top |