mRNA_P-wetherbeei_contig6410.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: A0A7S4DD39_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD39_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 2.570e-13 Identity = 62/200 (31.00%), Postives = 82/200 (41.00%), Query Frame = 1
Query: 34 WIWEYLSTPWLELTAGAEGDPGWGPVAAGS----------------GGQYWLAEA--ADFKPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRS 579
W+W YL G P GP AA + GG EA DF PPLY QH GHSRTIVGME+ +I G L++ DP+ G ++ LD ++ WQ+ KRGL+TL K +QIV + PG+M+ +EREASK +R+
Sbjct: 20 WVWRYLDPA---------GHPARGPAAAHAIYRDALAAXXXXXXXPGGCLPEDEAWPPDFLPPLYFQHQGHSRTIVGMEKLSI-------------------------------------------TKAGKTTEKEHLILLDPAMAGKDLKKVLDIQQD-WQKMFKRGLHTLNKSAYQIVYIQPGIMSESEREASKKLRA 166
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: E1ZPX6_CHLVA (ZZ-type domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZPX6_CHLVA) HSP 1 Score: 75.9 bits (185), Expect = 5.520e-11 Identity = 51/142 (35.92%), Postives = 67/142 (47.18%), Query Frame = 1
Query: 160 KPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRSTK 585
KPPLY QHDGHSRTIVG ER +G R +LLI DP + G ++AAAL + R WQR +KRG +TLR + +Q++ V PGL AAE+EA K + + +
Sbjct: 344 KPPLYFQHDGHSRTIVGCERRLVG----------------------QQRRAVY-----------------------TLLILDPGTPGGKLAAAL-AQRCGWQRMLKRGAHTLRHQQYQLLFVQPGLAAAAEKEALKLVAAVE 439
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: A0A1Y1HYU7_KLENI (ZZ-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYU7_KLENI) HSP 1 Score: 72.4 bits (176), Expect = 1.040e-9 Identity = 56/188 (29.79%), Postives = 79/188 (42.02%), Query Frame = 1
Query: 16 NVRMMDWIWEYLSTPWLELTAGAEGDPGWGPVAAGSGGQYWLAEAADFKPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRS 579
++R+++W+W+Y +T AGA D ++ +PPLY QH+GHSRTIVG+ER R LLI DPS R +E+ AL + WQR IKRG++TLRK ++Q+ V PG+ T E E K + S
Sbjct: 464 HMRLIEWVWKYFTTG-----AGAAEDSEAEEAPTNQRRHVIMSN----RPPLYFQHEGHSRTIVGIER----------------------------RRSRPDAP-----------------EEAFLLILDPSQRTAEVVEALRQKKG-WQRLIKRGVHTLRKPEYQLCFVEPGIATGEELEKLKVLDS 596
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: I0YK87_COCSC (DUF1671-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK87_COCSC) HSP 1 Score: 68.2 bits (165), Expect = 7.070e-9 Identity = 53/187 (28.34%), Postives = 74/187 (39.57%), Query Frame = 1
Query: 25 MMDWIWEYLSTPWLELTAGAEGDPGWGPVAAGSGGQYWLAEAADFKPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRSTK 585
++DW+W Y + A+G + G G KPPLY QH+GHSRTIVG+E+ GG LLI DPS + AL R WQR IKR + L+K+++Q++ L GL T AE E K +R+++
Sbjct: 169 LLDWVWHYF------IEEDAKGQK-----SQGEGNNKGNPVILSGKPPLYFQHEGHSRTIVGIEKAQDSGGQPPQVY---------------------------------------------LLILDPSLTTGALERALRQ-RKGWQRLIKRSMCMLQKREYQLLHCLNGLATGAELEELKIMRASQ 298
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: UPI000D62C4B8 (zinc finger with UFM1-specific peptidase domain protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62C4B8) HSP 1 Score: 68.9 bits (167), Expect = 7.370e-9 Identity = 54/187 (28.88%), Postives = 77/187 (41.18%), Query Frame = 1
Query: 25 MMDWIWEYLSTPWLELTAGAEGDPGWGPVAAGSGGQYWLAEAADFKPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRSTK 585
+ +W+W Y S L + S Q + E K PLY QHDGHSRTIVG++ ++ G H +LLI DP+ + + L S + WQRFIKRG++TL+K D+Q+ + PG+ T AE E K + ST+
Sbjct: 265 LANWVWSYFSDNMLGKS---------------SCNQVVVTE----KAPLYFQHDGHSRTIVGIQLKSLPNGM----------------------------------------------HQYNLLILDPAHKTQVLKNCL-SKKVGWQRFIKRGVHTLKKPDYQLCYMDPGIATGAEMEKLKILDSTR 385
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: UPI000D1C6536 (zinc finger with UFM1-specific peptidase domain protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6536) HSP 1 Score: 68.9 bits (167), Expect = 1.090e-8 Identity = 51/191 (26.70%), Postives = 77/191 (40.31%), Query Frame = 1
Query: 10 WNNVRMMDWIWEYLSTPWLELTAGAEGDPGWGPVAAGSGGQYWLAEAADFKPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRST 582
+N+ R++DW+W Y + + + P+ S +PPLY QH GHSRTIVG++R GG LL+FDPS R E+ AL + + WQ+ IKRG++TL++ +Q+ + PG+ E E K + ST
Sbjct: 373 YNHQRLVDWVWNYYTEEDRDHVENRQ------PLVIISR-----------RPPLYFQHQGHSRTIVGIQRRRKLGGPE----------------------------------------------EAFLLVFDPSQRTEELVKALRA-KTGWQKLIKRGVHTLKRAAYQVCHIDPGIAQGKELENLKNLSST 499
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: B4FB13_MAIZE (Peptidase C78 ubiquitin fold modifier-specific peptidase 1/ 2 n=6 Tax=Zea mays TaxID=4577 RepID=B4FB13_MAIZE) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-8 Identity = 46/144 (31.94%), Postives = 64/144 (44.44%), Query Frame = 1
Query: 160 KPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRSTKVR 591
K PLY QH GHSRTIVG+++ + G +LLI DP R +++ +L S +N WQR +KRG++TLRK +Q+ V PG+ ++ E E KTI S VR
Sbjct: 315 KTPLYFQHQGHSRTIVGIQKEMVHRGSQ---------------------------------------------EQYTLLILDPGHRTADLERSLRS-KNGWQRLVKRGVHTLRKPQYQLCYVDPGIASSEEMEQLKTIDSMLVR 412
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: D8LTI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI6_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 2.410e-8 Identity = 75/144 (52.08%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 163 PPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCS-LLIFDPSSRGSEIAAALDSGRN-IWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRSTKV 588
PPLY QHDGHSR+IVG+ + G G G XXXXXXXXXXXXX X XXXXXXXXXXX GGA + L +FDPS G I ALD +N W RF+KRG + L ++ Q+V V PGL+ A + +A K I S K+
Sbjct: 524 PPLYFQHDGHSRSIVGVLQPG-GAGQRGGRSGXXXXXXXXXXXXXIXXXXXXXXXXXXX--------GGAGSRQAACLFVFDPSHAGGPIRDALDDTQNGRWGRFLKRGGHALHRRQFQMVAVRPGLVDAGQADAWKRIVSEKI 658
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: A0A0G4FGA4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FGA4_9ALVE) HSP 1 Score: 63.5 bits (153), Expect = 3.710e-8 Identity = 57/148 (38.51%), Postives = 74/148 (50.00%), Query Frame = 1
Query: 160 KPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWG-HPCSLLIFDPSSRGSEIAAALDSGRNI--------WQRFIKRGLYTLRKKDHQIVRVLPG-LMTAAEREASKTI 573
KPPLY QH GHSRTIVG +R R XXXXXXXXX GG+W H LLIFDPS R +EI +A D R + W R+ KR L TLR+ + +++R P +++ ER+A+K +
Sbjct: 32 KPPLYFQHQGHSRTIVGAQR----------------------------RMRENSGGGRXXXXXXXXXRGGSWNDHERFLLIFDPSLRIAEIRSATDLTRILEAGNRAPPWCRYFKRSLGTLRQCEFELIRADPSSVLSELERQAAKDV 151
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Match: A0A0D3EZL1_9ORYZ (Uncharacterized protein n=1 Tax=Oryza barthii TaxID=65489 RepID=A0A0D3EZL1_9ORYZ) HSP 1 Score: 66.2 bits (160), Expect = 4.820e-8 Identity = 53/189 (28.04%), Postives = 75/189 (39.68%), Query Frame = 1
Query: 25 MMDWIWEYLSTPWLELTAGAEGDPGWGPVAAGSGGQYWLAEAADFKPPLYLQHDGHSRTIVGMERTAIGGGDSGXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXDGGAWGHPCSLLIFDPSSRGSEIAAALDSGRNIWQRFIKRGLYTLRKKDHQIVRVLPGLMTAAEREASKTIRSTKVR 591
++DWIW Y ++ + + + K PLY QH GHSRTIVG+++ G G +LLI DP R S++ AL S + WQR +KRG++TLRK +Q+ V PG+ ++ E E KTI S VR
Sbjct: 239 LVDWIWNYFASRHSDNSDSSR------------------RVLVSDKTPLYFQHQGHSRTIVGIQKQ---NGQRGNQDRF------------------------------------------TLLILDPGHRTSDLERALRS-KTGWQRLVKRGVHTLRKPQYQLCYVDPGIASSEEMEQLKTIDSILVR 363 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6410.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6410.2.1 >prot_P-wetherbeei_contig6410.2.1 ID=prot_P-wetherbeei_contig6410.2.1|Name=mRNA_P-wetherbeei_contig6410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp MMDWIWEYLSTPWLELTAGAEGDPGWGPVAAGSGGQYWLAEAADFKPPLYback to top mRNA from alignment at P-wetherbeei_contig6410:1819..3454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6410.2.1 ID=mRNA_P-wetherbeei_contig6410.2.1|Name=mRNA_P-wetherbeei_contig6410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1636bp|location=Sequence derived from alignment at P-wetherbeei_contig6410:1819..3454- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6410:1819..3454- >mRNA_P-wetherbeei_contig6410.2.1 ID=mRNA_P-wetherbeei_contig6410.2.1|Name=mRNA_P-wetherbeei_contig6410.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig6410:1819..3454- (Phaeothamnion wetherbeei SAG_119_79)back to top |