mRNA_P-wetherbeei_contig6410.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A6H5L3G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G2_9PHAE) HSP 1 Score: 143 bits (360), Expect = 3.560e-33 Identity = 68/116 (58.62%), Postives = 91/116 (78.45%), Query Frame = 3
Query: 234 VLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPWPTPIVPRGVMPTSIGLRSATAAPTG 581
+++DSRMRAM++ EP+ PFIYRV++L ELG+SSV+ VGGCG++FDV DT +L+++Y +DAT +A S+SRRF GRVQ+AGRGLVHRLPWP PR V+P S+ +R A A G
Sbjct: 483 MIRDSRMRAMVSHEPITPFIYRVSSLWLELGVSSVIVVGGCGDYFDVHDTALLVDNYVVSDATERAHSISRRFCVGRVQYAGRGLVHRLPWPGDPQPRAVVPESVLIRLAAAVGAG 598
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A7S3LAA5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LAA5_9STRA) HSP 1 Score: 120 bits (301), Expect = 9.590e-28 Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 3
Query: 189 CSMVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPW 506
C +L D SA + +D RMRA++ E + P +YRVN L G+SS+V VGG G+W DV +L+ Y+CTDATAKA SVS++FS+G VQ+AGRG VHRLPW
Sbjct: 139 CKAMLVDEDVSAANFMARDGRMRALVMDESITPLLYRVNGLYATHGVSSIVVVGGVGDWLDVPHHVVLMNKYKCTDATAKAKSVSKQFSHGHVQYAGRGTVHRLPW 244
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A7S2AK97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AK97_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.670e-26 Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 3
Query: 207 DTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPWP 509
D SA + +D RMRA++ EP+ P +YRV L LG+SS+V +GG G+W DV D +LL+DY+ +DAT +AA +S+ FS+G VQ+AGRG HRLPWP
Sbjct: 197 DEDTSAANFMSRDGRMRALVTHEPITPLLYRVTGLWESLGVSSIVVIGGNGDWLDVADCVVLLDDYKASDATRQAAFISKTFSSGLVQYAGRGSAHRLPWP 297
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A7S4NA55_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NA55_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.350e-25 Identity = 66/135 (48.89%), Postives = 83/135 (61.48%), Query Frame = 3
Query: 150 SSISPSSPSFLNSCSMVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPWPTPIVPRGVMPTSIGL 554
S S +S + S +L D SA + +D RMRA++ E + PF+YRVN + N LGISSVV VGG G+W DV I L+ Y TDAT KA S+SR+FS+G VQ+AGRG+VHRL W P PTS L
Sbjct: 283 SQASNTSEAIEMGASAMLVDEDVSAANFMARDGRMRALVMDESITPFLYRVNGIYNSLGISSVVVVGGVGDWLDVPQHVIKLDRYVATDATKKAESISRQFSHGHVQYAGRGVVHRLQWDGDRTPLQRRPTSESL 417
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A1Z5JZJ3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZJ3_FISSO) HSP 1 Score: 118 bits (296), Expect = 5.480e-25 Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 3
Query: 189 CSMVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPW 506
CS +L D SA + +D RMR+++ E + P +YRVN L GISS+V VGG G+W DV D IL++ Y C DAT KA SVSR+FS+G VQ+ GRG+VHRL W
Sbjct: 382 CSALLVDEDVSAANFMARDGRMRSLVMDESITPLLYRVNGLYASRGISSIVVVGGVGDWLDVPDAVILMDKYTCRDATEKARSVSRQFSHGHVQYGGRGVVHRLSW 487
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: B7FPW7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPW7_PHATC) HSP 1 Score: 116 bits (291), Expect = 2.490e-24 Identity = 60/117 (51.28%), Postives = 75/117 (64.10%), Query Frame = 3
Query: 192 SMVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPWPTPIVPRGVMPT 542
S L D SA + +D RMRA++ E + P +YRVN L + GISSVV VGG G+W DV D IL++ Y C DAT KA SVSR+FS+G VQ+ GRG+VHRL W + P PT
Sbjct: 395 SAFLVDEDVSAANFMARDGRMRALVMDESITPLLYRVNGLYQKHGISSVVVVGGVGDWLDVPDAVILMDKYVCHDATQKARSVSRQFSHGHVQYGGRGVVHRLNWESTGTPNPRRPT 511
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A7S0BY61_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY61_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.390e-23 Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 3
Query: 186 SCSMVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPW 506
S ++L D SA + +D RMRA+I E + P +YR+N + +LG+SSVV VGG G+W DV I+L+ Y D T KA SVS++FS+G VQ+AGRG+VHRL W
Sbjct: 35 SSPLLLIDEDVSAANFMARDGRMRALIQNESITPLLYRINGIYTKLGVSSVVVVGGVGDWLDVPHQVIMLDHYNVQDVTKKARSVSKQFSHGHVQYAGRGVVHRLQW 141
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A448ZCG8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCG8_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.130e-22 Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 3
Query: 198 VLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPW 506
+L D SA + +D RMRA++ E + P +YRVN L N GISSVV VGG G+W DV + +LL+ Y DATAKA S+SR+FS G V++AGRG+VHRL W
Sbjct: 394 LLVDEDISAANFMARDGRMRALVMDESITPLLYRVNGLYNAHGISSVVVVGGVGDWLDVPNNVVLLDKYVVFDATAKAQSISRQFSYGHVEYAGRGVVHRLQW 496
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A1E7FER5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FER5_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.380e-22 Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 3
Query: 198 VLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPWP---TPIVPR 527
+L D SA + +D RMR+++ E + P +YRVN L N ISS+V VGG G+W DV ILL+ Y DAT KAAS+SR+FS+G VQ+AGRG+VHRL W TP++ R
Sbjct: 229 LLVDEDISAANFMARDGRMRSLVMDESITPLLYRVNGLYNSHKISSIVVVGGVGDWLDVPQNVILLDKYIVHDATKKAASISRQFSHGHVQYAGRGVVHRLQWERKGTPLLRR 341
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Match: A0A7S4S9D9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9D9_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.740e-22 Identity = 55/105 (52.38%), Postives = 69/105 (65.71%), Query Frame = 3
Query: 192 SMVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAVGGCGEWFDVQDTTILLEDYRCTDATAKAASVSRRFSNGRVQFAGRGLVHRLPW 506
S +L D SA + +D RMRA++ E + P +YRVN L GISSVV VGG G+W DV D IL+ Y DA KA S+SR+FS G V++AGRG+VHRLPW
Sbjct: 388 SAMLIDEDVSAANFMARDGRMRALVMDESITPLLYRVNGLYISKGISSVVVVGGVGDWLDVPDNVILMNRYMPNDALKKAQSISRQFSYGHVEYAGRGVVHRLPW 492 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6410.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6410.1.2 >prot_P-wetherbeei_contig6410.1.2 ID=prot_P-wetherbeei_contig6410.1.2|Name=mRNA_P-wetherbeei_contig6410.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=375bp MVLPDTPPSAIPCVLQDSRMRAMIAKEPLVPFIYRVNALCNELGISSVVAback to top mRNA from alignment at P-wetherbeei_contig6410:125..1811+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6410.1.2 ID=mRNA_P-wetherbeei_contig6410.1.2|Name=mRNA_P-wetherbeei_contig6410.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1687bp|location=Sequence derived from alignment at P-wetherbeei_contig6410:125..1811+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6410:125..1811+ >mRNA_P-wetherbeei_contig6410.1.2 ID=mRNA_P-wetherbeei_contig6410.1.2|Name=mRNA_P-wetherbeei_contig6410.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig6410:125..1811+ (Phaeothamnion wetherbeei SAG_119_79)back to top |