mRNA_P-wetherbeei_contig641.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.680e-84 Identity = 138/247 (55.87%), Postives = 175/247 (70.85%), Query Frame = 3
Query: 186 RWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSA-GHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
RW L GQ ALVTGGTKGIG AI ELA LGA V CARS+ L++ EW++ GL++H ADV +E+R+ALL K + F G+L ILVNNVG +++R TVDYT E ++ +NF S + + + HPLLK A G SVVNI SVAGV +I S + YAA+KA+++ +T CEWA DGIRVN + PW+TNTPL +PV D A +L RTP+ RIA+ EEVSAL AFLCM+ ASY+T QV+CVDG
Sbjct: 4 RWRLDGQKALVTGGTKGIGNAIVVELAHLGAEVYTCARSDADLQQCLAEWRAQGLKVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSEEAEHVLRVNFHSCFAMMQLCHPLLKEAQGGGSVVNIGSVAGVTSIKSGTPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPVFEDKIKYAEILSRTPMKRIAEAEEVSALVAFLCMRGASYITGQVVCVDG 250
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: UPI0002C34EFE (tropinone reductase homolog n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C34EFE) HSP 1 Score: 256 bits (653), Expect = 2.190e-79 Identity = 129/251 (51.39%), Postives = 171/251 (68.13%), Query Frame = 3
Query: 171 DMAAERWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
++A RW LTG TALVTGGT+GIG A+ ELA+LGA V C+R+ E LE +EW + G I + DV + ER L+ + FAG L+I VNNVG N+++ T +YT E+ ++M+ N S Y L + AHPLLK +G SVV ISSVAG+ ++ S + YAA+KA++N +T L CEWAKD IR NA+ PW+T T LV +L D + V RTPL R+A+PEEVS+L AFLC+ ASY+T Q+ICVDG
Sbjct: 7 NLATPRWSLTGTTALVTGGTRGIGYAVVEELASLGAYVFTCSRNAEELERCLKEWSAKGFRITGIVCDVSVKSEREKLMEQVGVSFAGRLNIFVNNVGTNIRKPTTEYTFEEYSKVMSTNLESTYHLCQIAHPLLKGSGAGSVVFISSVAGLVSLGSGTIYAASKAAINQLTKNLACEWAKDNIRSNAVAPWYTRTSLVEHMLEDKKFLEEVTSRTPLNRVAEPEEVSSLVAFLCLPAASYITGQIICVDG 257
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: A0A2I0B5Q5_9ASPA (Tropinone reductase like n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B5Q5_9ASPA) HSP 1 Score: 254 bits (648), Expect = 1.310e-78 Identity = 125/248 (50.40%), Postives = 173/248 (69.76%), Query Frame = 3
Query: 180 AERWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
A RW L G TALVTGGT+GIG A+ ELA LGA V C+R E L + ++W+ G + +D+ + E+R L+ K + F G L+IL+NNVG+N+++ T+DY++ ++ +MN NF S + +++ AHPLLK++G S+V ISSVAGV AI S + YAA KA+LN +T L CEWAKD IRVN++ PW+ T LV +L + + GVL RTPL R+ +PEEVS+L AFLC+ ASY+TAQ+I VDG
Sbjct: 12 AGRWSLDGMTALVTGGTRGIGNAVVEELAALGATVYTCSRKESELNDCLKKWEGLGYRVSGSVSDLSVREQREDLIQKVSSTFCGKLNILINNVGSNIRKHTIDYSEEDYSFIMNTNFESAFHISQLAHPLLKASGKGSIVFISSVAGVVAIGSGTIYAATKAALNQITKNLACEWAKDNIRVNSVSPWYIKTSLVDQLLENQNFIEGVLSRTPLNRVGEPEEVSSLVAFLCLPSASYITAQIISVDG 259
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: A0A0C9S3L1_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_28761_1323 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9S3L1_9SPER) HSP 1 Score: 251 bits (642), Expect = 8.890e-78 Identity = 128/247 (51.82%), Postives = 167/247 (67.61%), Query Frame = 3
Query: 183 ERWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
+RW L G TALVTGGTKGIGKA+ ELA GA V CAR+E+ L E WK+AGL + D+ + R L+ K + G L+IL+NNVG N +R T++YT +F M+ NF S Y L + +HPLLK++G S+V ISSVAGV AI S + YAA+K ++N + L CEWA+D IRVN++ PW+T TPLV +L D + VL RTPL R+A+P+EVS+L AFLC+ ASY+T QVI VDG
Sbjct: 12 QRWSLQGMTALVTGGTKGIGKAVVEELAGFGATVYTCARNEKDLNECLTAWKAAGLNVEGSNCDLSLRSAREELIEKVSSFCNGKLNILINNVGTNKRRPTLEYTAEDFSFYMSTNFESAYHLCQLSHPLLKASGSGSIVFISSVAGVVAIQSGTLYAASKGAMNQIAKNLACEWARDNIRVNSVAPWYTKTPLVKKLLEDEEFVKNVLERTPLDRLAEPQEVSSLVAFLCLPAASYITGQVISVDG 258
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: UPI0018AE84AF (tropinone reductase homolog At5g06060-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE84AF) HSP 1 Score: 249 bits (635), Expect = 1.210e-76 Identity = 128/248 (51.61%), Postives = 168/248 (67.74%), Query Frame = 3
Query: 180 AERWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
+ERW L G TALVTGGT+GIG A+ ELA LGA V C+R+E L + +EW++ GL + D+ E+R L+ K + +F G L+IL+NN G N+++ T DYT EF +MN NF SVY L + AHPLLK++G S+V ISSVAGV AISS S YAA KA++N + L CEWAKD IR NAI PW+ T L PVL T ++ RTPL R+ +P+EVS++ AFLC+ ASY++ Q+I VDG
Sbjct: 16 SERWSLRGMTALVTGGTRGIGHAVVEELAGLGATVYTCSRNEAELNDRLKEWEALGLRVTGSVCDLASREQRVELIQKVSSVFDGKLNILINNAGTNIRKPTSDYTSEEFSFLMNTNFESVYHLCQLAHPLLKASGAGSIVLISSVAGVVAISSGSVYAATKAAMNQLARNLACEWAKDNIRTNAIAPWYIKTSLTEPVLNQELTQK-IVARTPLRRVGEPDEVSSIVAFLCLPSASYISGQIISVDG 262
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: I0Z9N4_COCSC (NAD(P)-binding protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z9N4_COCSC) HSP 1 Score: 247 bits (631), Expect = 3.380e-76 Identity = 129/247 (52.23%), Postives = 170/247 (68.83%), Query Frame = 3
Query: 186 RWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAG-VAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
R+GL GQ ALVTGGTKGIGKAI ELA+LGA VL CAR+ +E+A R W+ G + V+AD+ ++ R L+ N+LF G+L ILVNNVG NV++ TV+Y+ +F + N S Y LT+ AHPLLK+AG SSV+ +SSVAG + S + YA KA+++ ++ L CEWA DGIR+N++ PW+ +TPL APV+ D +A V RTP+ R+ QPEEVS L AFLC ASY+T Q I VDG
Sbjct: 11 RFGLQGQKALVTGGTKGIGKAIVEELASLGAEVLTCARNASDIEQATRAWQDKGWKAQGVQADLSSADGRQKLIEDVNNLFGGSLHILVNNVGCNVRKPTVEYSSDDFSYITKTNLESAYNLTQLAHPLLKAAGRSSVIMMSSVAGGPTTVQSGTIYAMTKAAMDQLSRNLSCEWASDGIRINSVKPWYIDTPLAAPVINDPVKLAEVESRTPMKRVGQPEEVSGLVAFLCSPAASYITGQCIAVDG 257
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI) HSP 1 Score: 247 bits (630), Expect = 1.930e-75 Identity = 132/255 (51.76%), Postives = 170/255 (66.67%), Query Frame = 3
Query: 186 RWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSA---------GHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
RW L G+TA+VTGGTKGIGKAI ELA LGA+V+ C+R+ + EWKS GL + ADV +E R +L+ A + F G L ILVNNVG N+++ TVDYT E +M+ NF S++ LT+ HPLLK+A G SSV+NISSVAG+ I S S YAA+KA++N +T GCEWA DGIRVNA+ PW+T TPL PV D + + +RTP+ R A +EVS + AFLCM+ A Y+T+QVI DG
Sbjct: 44 RWSLEGKTAVVTGGTKGIGKAIVEELACLGAKVITCSRNPADVAACLEEWKSKGLLVEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGSPYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADPVRVNEITQRTPMKRWADADEVSGMVAFLCMKGAGYITSQVIATDG 298
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: A0A059AFL7_EUCGR (Uncharacterized protein n=9 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AFL7_EUCGR) HSP 1 Score: 245 bits (626), Expect = 3.170e-75 Identity = 126/246 (51.22%), Postives = 161/246 (65.45%), Query Frame = 3
Query: 186 RWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
RW L G TALVTGGTKGIG AI ELA LGA V C+R+E + E ++WKS G + DV ER L+ + +F G L+IL+NNVG N + T+DYT +F +M NF S Y L++ AHPLLK++G S+V +SSV GV +I+ S Y+A K ++N +T L CEWAKD IR N++ PWF TPL P+L D V+ RTPLGR +PEEVS+L AFLC+ ASY+T Q ICVDG
Sbjct: 22 RWSLHGMTALVTGGTKGIGHAIVEELARLGATVHTCSRNEAEINECLKDWKSKGFRVSGSTCDVSSRSEREKLMLTVSSVFDGKLNILINNVGTNTLKSTMDYTAEDFSFIMTTNFESAYHLSQLAHPLLKASGAGSIVFLSSVCGVVSINVGSIYSATKGAMNQLTKNLACEWAKDNIRSNSVAPWFILTPLAEPLLSDKKFHEEVIARTPLGRTGEPEEVSSLVAFLCLPAASYITGQTICVDG 267
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI) HSP 1 Score: 245 bits (625), Expect = 3.360e-75 Identity = 135/256 (52.73%), Postives = 173/256 (67.58%), Query Frame = 3
Query: 186 RWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRK-TVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSA---------GHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
+W L G+TALVTGGTKGIGKAI ELA LGA+VL C+R+E+G+ EW++ GLE+H + DV +E R L + A + F G L ILVNNVG ++++ T D+T EF ++N NF +V LT+ HPLLK+A G SSVVNISS+AGV A+ + +AYAA+KA++N +T GCEWAKDGIRVNA+ P TNTP V R M R P+GR A P E+S AFLCM+ ASY+T+QVICVDG
Sbjct: 11 QWSLEGRTALVTGGTKGIGKAIVEELACLGAKVLTCSRTEDGVIACITEWRAKGLEVHGIAVDVTTAEGRQELFSAAEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFHPLLKAAAAAEGARDKGGSSVVNISSIAGVTAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVPRSTELMD----RIPMGRWADPHEISGQVAFLCMKGASYITSQVICVDG 262
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Match: W1NZZ4_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1NZZ4_AMBTC) HSP 1 Score: 244 bits (624), Expect = 4.740e-75 Identity = 123/247 (49.80%), Postives = 162/247 (65.59%), Query Frame = 3
Query: 183 ERWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAQREWKSAGLEIHAVKADVGISEERSALLAKANDLFAGNLSILVNNVGNNVKRKTVDYTDGEFHEMMNINFGSVYQLTRAAHPLLKSAGHSSVVNISSVAGVAAISSESAYAAAKASLNHMTSYLGCEWAKDGIRVNAICPWFTNTPLVAPVLRDAATMAGVLRRTPLGRIAQPEEVSALAAFLCMQPASYVTAQVICVDG 923
ERW L G TALVTGGTKGIG A E+A+LGA V C+R+E+ L + EWK GL+ H D+ +R L+ + F G L+ILVNNVG N+++ T+ YT EF +M N S Y + + HPLLK++G S+V ISSVAGV A+ + + YAA K +LN +T L CEWAKD IR N++ PWF TPLV L+ G++ RTP+ R+ +PEEVS+L AFLC+ ASY+T Q+ICVDG
Sbjct: 15 ERWSLNGMTALVTGGTKGIGHATVEEIASLGASVYTCSRNEDDLNKCLNEWKGMGLDAHGSVCDLSSRPDREKLIDAVSSHFKGKLNILVNNVGTNIRKPTMQYTAAEFSFLMATNLESAYHMCQLTHPLLKASGVGSIVFISSVAGVVALHTGTIYAATKGALNQITKNLACEWAKDNIRTNSVAPWFIKTPLVEDFLQVKGITEGIIARTPMRRMGEPEEVSSLVAFLCLPAASYITGQIICVDG 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig641.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig641.2.2 >prot_P-wetherbeei_contig641.2.2 ID=prot_P-wetherbeei_contig641.2.2|Name=mRNA_P-wetherbeei_contig641.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp MAAERWGLTGQTALVTGGTKGIGKAITTELATLGARVLICARSEEGLEEAback to top mRNA from alignment at P-wetherbeei_contig641:1301..3115- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig641.2.2 ID=mRNA_P-wetherbeei_contig641.2.2|Name=mRNA_P-wetherbeei_contig641.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1815bp|location=Sequence derived from alignment at P-wetherbeei_contig641:1301..3115- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig641:1301..3115- >mRNA_P-wetherbeei_contig641.2.2 ID=mRNA_P-wetherbeei_contig641.2.2|Name=mRNA_P-wetherbeei_contig641.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=936bp|location=Sequence derived from alignment at P-wetherbeei_contig641:1301..3115- (Phaeothamnion wetherbeei SAG_119_79)back to top |