mRNA_P-wetherbeei_contig64.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig64.2.1
Unique NamemRNA_P-wetherbeei_contig64.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: D7G4R5_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R5_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.260e-117
Identity = 188/344 (54.65%), Postives = 232/344 (67.44%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWREASPHTWTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPLPVRAEGGRLARAARGEVDQGAAGDRNTY--HAFPTLEVLCG-ATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEE 1023
            WHDLC  PEELRP+ TL +GQCFNWR+A    W GVLG  V+AIRQTP TTL+  LS + +DG          ++ L   LR+YF L TPLAPL   W+  D RMAAVA  + GVRVVRQDP+EC+FSFICSSNNNI RIT ML +LRR YG  L    +GG  A  A G + +     +     H+FPT++ L   ATE +LR +GFGYRA+Y+V++A+L+ + GG  W L +R   R  V+  L    GVG KVADC ALFSLDQ + IPVD HVWRIACRD+DP L   KS+TP +Y RVG+LFR R+  RAGWAHS LFAAELP F+A+L   +  +M+E
Sbjct:   38 WHDLCVPPEELRPDSTLTVGQCFNWRQAGADCWVGVLGREVIAIRQTPCTTLFRSLSAVTTDGDAKV------AAALATTLREYFFLRTPLAPLYQRWSEGDPRMAAVACSISGVRVVRQDPVECIFSFICSSNNNIPRITGMLGKLRRTYGDLLLNVGKGGLAATGALGNITECEEWAKLPLELHSFPTVDALATRATEADLRAMGFGYRAKYIVDSAKLMHSNGGAGWALDMRNKDRDEVRSQLVTLCGVGPKVADCIALFSLDQASTIPVDVHVWRIACRDYDPTLVECKSLTPTVYARVGNLFRDRFGDRAGWAHSLLFAAELPGFKAKLSPEMQRQMDE 375          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A4D9CXL3_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXL3_9STRA)

HSP 1 Score: 334 bits (857), Expect = 1.860e-104
Identity = 193/382 (50.52%), Postives = 218/382 (57.07%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWREASPHT------------------------------WTGVLGSRVLAIRQTPETTLYSCLSGLRSDGST-GTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPLPVRAEGGRLARAARGEVDQGAAGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAKA 1053
            W DL   P ELRPEF+L MGQCFNWR     T                              W GVL   VL IRQTP TTL   +     +G   G   G      L   L+ YFQ++T L PL   WA  D RM  VAE LPGVRV+RQDP+ECLFSFICSSNNNI RI LML RLR+ YG+PL                           YHAFP L  L  A+EEELRGLG GYRAR++  TA  L   GGR+WL+ LR   R   Q+AL  F GVGRKVADC ALFSLDQ  AIPVD HVWRIACRD+ P L+  KS+TP +YE VGD+FR ++   AGWAHS LFAAELP +RARL   L  EM  F+  E   KA
Sbjct:   24 WMDLDVPPHELRPEFSLTMGQCFNWRRQGLETQAKVAVGEGEEGGREXXXXXXXXGGGCDKVWIGVLDRHVLEIRQTPTTTLVRRVGASVDEGRVEGGREGEVEDKVLMARLQDYFQVNTSLRPLYHCWAEGDVRMKTVAEHLPGVRVLRQDPVECLFSFICSSNNNIPRIALMLDRLRKTYGEPLG------------------------KGYHAFPPLSSLASASEEELRGLGLGYRARFIKLTASQLLDLGGREWLMSLREKSREEAQQALCTFPGVGRKVADCVALFSLDQHGAIPVDVHVWRIACRDYSPVLKEHKSLTPAVYEAVGDIFRNKFGSHAGWAHSLLFAAELPDYRARLPLILQNEMLAFKKEEGIEKA 381          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A8J5XJ63_DIALT (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ63_DIALT)

HSP 1 Score: 318 bits (816), Expect = 2.370e-102
Identity = 180/355 (50.70%), Postives = 215/355 (60.56%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWREASPHT---WTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPLPVRAEGGRLARAARGEVDQGAAGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAKAE 1056
            WH L A+  ELR   TL  GQ F W          W GV+G RV+ +++      + C S                   L +AL  YFQL+TPL  L   W +AD R  AV   LPG+R++RQ+P+ECLFSFICSSNNNI RIT +L+RLR  YG  +P+R     +  AA G+       D  ++ AFPT+E L    E ELR LG GYRAR++ ETA LL  RGG DWL+  RG  R  VQ AL   SGVGRKVADC ALFSLDQ A IPVD HVW+IACRD+DP+L  AKS+TP +Y RVGDLFRAR+   AGWAHS LFAAELP FRA L   L   M  FR  E+   A+
Sbjct:   19 WHRLGAARAELRLHATLANGQAFTWSRVGSDAKSPWVGVVGGRVIVLKEEDSHVEFCCPSAPEES-----------PDALREALTAYFQLETPLVELYERWRSADERTCAVLNALPGLRILRQEPVECLFSFICSSNNNIGRITGILARLRAAYGTRIPIRDAS--IFGAASGD-----GADVPSFFAFPTIERLAQVPEAELRELGLGYRARFIRETASLLLERGGADWLVEQRGRPREDVQAALVELSGVGRKVADCVALFSLDQPATIPVDVHVWQIACRDYDPSLHEAKSLTPAVYGRVGDLFRARFGAHAGWAHSVLFAAELPVFRALLPDVLQERMVAFRLVEREKSAQ 355          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A7S2DRB9_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRB9_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.450e-101
Identity = 184/387 (47.55%), Postives = 237/387 (61.24%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWR---------EASPHT--------------------WTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPL---PVRAEGGRLARAARGEVDQGAAGDR--NTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGG---GRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAK 1050
            W+DL   PEELR   +L  GQCFNWR         E  P T                    W GV+G RV+A+R+T  +  ++CL+   +     T        +L   L   FQL+ PL  L   W+ AD R+A VAE +PG+RV+RQDP+ECLF+FICSSNNNI RITLM++R+R  YG  L    V ++GG    ++  +  + A  D   + +++FP +EV+  A EEE R LG GYRAR+V E+A  L + GGR WL+GLR      R AV E L  F+GVG KVADC ALFSLDQ   IPVDTHVW+IACRD+D  L   KS+TP IY+R+GDLFR R+  +AGWAHS LFAAEL  F+++L + +  EM+ FRA EKAAK
Sbjct:   47 WYDLSTPPEELRVTASLATGQCFNWRPIKLPLVSTEKRPTTCASSPPANAIGLEKSDIDFDWVGVVGDRVVALRETGGSVHFACLNNKNAKKDQET--------ELRSELEDMFQLEVPLKGLYHSWSRADDRLARVAEAIPGLRVLRQDPVECLFAFICSSNNNIPRITLMMNRIRAAYGTHLMDIAVVSDGGSTKSSSTDDPTRIAQPDTVVHRFYSFPDVEVMARAREEEYRHLGLGYRARFVRESAGSLLSLGGRPWLVGLRDRDAYSREAVLEELKKFTGVGSKVADCVALFSLDQSDLIPVDTHVWQIACRDYDSTLSEVKSLTPKIYDRIGDLFRTRFGDKAGWAHSLLFAAELAAFKSQLPEDMREEMDVFRAQEKAAK 425          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A7S1CUH0_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUH0_9STRA)

HSP 1 Score: 300 bits (769), Expect = 8.860e-97
Identity = 174/356 (48.88%), Postives = 221/356 (62.08%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWR----EASPHT----------------WTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQ---PLPVRAEGGRLARAARGEVDQGAAGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRL-AVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPN-LQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARL 993
            W DL   P+ELRP  TL  GQCFNW     E SP                  W G LG RVL+I++TP TTL+  L G     + GT          ++ L+QYF+L+TPL+PL   W+ AD R+  +A  +PGVR++RQ PLEC+FSFICSSNNNI RIT MLS  R  YG     +P+ +       AA  +       D  +  +FPTL+ L  A+E +LR +G GYRA++++ T +LL+  GG ++LL LR      AVQ+ L  FSG+GRKVADC ALFSLDQD +IPVD HV  IA RD+DP  L +AKS+TP IY+RVGDLFR+R+  RAGWAHS LF AELP FR+ L
Sbjct:    9 WIDLDVPPQELRPSSTLTNGQCFNWMVVETEESPDAINSPRQSAWGTHDGKEWVGPLGDRVLSIKETPTTTLFRVLHGP----TEGT----------KEYLQQYFRLETPLSPLYEEWSKADTRLKKIAAAIPGVRILRQAPLECMFSFICSSNNNIPRITKMLSSFRETYGSFMMDIPISSS------AANDD-------DSLSIFSFPTLDSLANASEGDLRAMGLGYRAKFIIGTRDLLQTSGGEEFLLNLRSNDDCQAVQDELIKFSGIGRKVADCVALFSLDQDDSIPVDIHVQHIASRDYDPTVLGQAKSLTPTIYKRVGDLFRSRFPNRAGWAHSLLFVAELPSFRSVL 337          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A6U6FTQ8_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FTQ8_9STRA)

HSP 1 Score: 308 bits (789), Expect = 9.260e-97
Identity = 185/382 (48.43%), Postives = 225/382 (58.90%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNW------REASPH---------------------TWTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPL---PVRA-EGGRLARAARGEVDQGAAGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAKA 1053
            W DL  SP+ELRP  TL  GQCFNW      R   P                       W G L   V  IR+T  TTL+  L G        T  GA      E+ LR+YFQL+T L PL   W+ +D+R++ +A  +PGVRVVRQDP ECLFSFICSSNNNI RITLMLSRLR KYG  L   P R  + G + R+          G++   ++FPTL  L  AT+ +LR +G GYRA+Y+ ET +LL   GG D+L  LR      VQE L  FSG+GRKVADC ALFSLDQ  AIPVD HV  IA R++DP L   KS+TP +Y+RVG++FR R++  AGWAHS LF AELP FR  L   +V EM+ +R  E A KA
Sbjct:  201 WTDLRISPDELRPSATLTTGQCFNWIVVQSDRNGLPSGDDGGVANMAQKSAWGTHDATEWVGPLRDWVFCIRETSTTTLFRVLHG--------TPKGA------EEYLRRYFQLETQLVPLYNLWSESDSRLSKIAAAIPGVRVVRQDPKECLFSFICSSNNNIPRITLMLSRLREKYGVHLMEVPARTLDSGGVLRS----------GEKLKIYSFPTLAALAPATDIDLRAMGLGYRAKYIAETTKLLNEVGGEDFLFSLRKSNASFVQEELIKFSGIGRKVADCVALFSLDQIEAIPVDVHVEHIARRNYDPTLVEVKSLTPTVYKRVGNIFRRRFSSHAGWAHSLLFVAELPSFRPALPGDIVEEMDLWRQQELARKA 558          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A7S2WTD5_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTD5_9STRA)

HSP 1 Score: 301 bits (771), Expect = 6.970e-96
Identity = 174/320 (54.37%), Postives = 217/320 (67.81%), Query Frame = 1
Query:  118 RVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPLPV----RAEGGRLARAARGEVDQGA---AGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGG--GRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAK 1050
            RV+++R+T  TTL++CL+  R D   G         +LE  LR YFQL  PL PL + W++AD R+A +A+ LPG+RV+RQ+P+ECLFSFI SSNNNIARI L+L+RLR++YG PL V    +A G  L   +     + A   AG +  Y AFP++    GA+E+ELR LG GYR+RY++ETA+ L+  GG  WL  LR     R   Q+ L  FSGVG+KVADC ALFSLD+   IPVDTHVW+IA RD D +L+ AKSITP IYERVGDLFR RY  RAGWAHS LFAAELP  R  L + L  EMEEFR +EK  K
Sbjct:    2 RVVSLRETTSTTLFACLN--RPDEDPG---------ELEGELRDYFQLAEPLVPLYSAWSSADERLAVIADRLPGLRVLRQEPVECLFSFIISSNNNIARIQLILNRLRQRYGDPLMVLESSQAPGRSLDSPSAKPTTKTALVAAGSQPLY-AFPSIAAFAGASEQELRDLGLGYRSRYIIETAKKLQELGGEPWLSALRRQEISRAEAQQELVQFSGVGQKVADCVALFSLDKADVIPVDTHVWQIAVRDMDASLKDAKSITPAIYERVGDLFRERYGARAGWAHSLLFAAELPSLRKYLPENLQQEMEEFRLAEKERK 309          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A0G4ECR9_VITBC (DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECR9_VITBC)

HSP 1 Score: 301 bits (772), Expect = 7.740e-96
Identity = 182/401 (45.39%), Postives = 228/401 (56.86%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWREASPHT-------------------WTGVLGSRVLAIRQTPETTLYSCLSGLR--SDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQPL-----PVRAEGGRLARAARGEVDQGA-----------------------AGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGG--RLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAK 1050
            W DL   P EL+PEF L  GQCF+++                         W GV+G  V  IRQT +TTL+ CL   R  SDGS           +    +R++F+L T +APL   W  ADARM  +   L G RV++QD  ECLF+FICSSNNNI+RITLM+ RL+R YG  +     P     G   +  +  + +                         AG   ++++FPT++ L  A+E+ LR +G GYRA+ VVETA+ L+  GG  +L  L+     R  VQ+ L  F GVGRKVADC  LFSLD+  AIPVDTHVWRIACRD D +LQ AKS+TP +Y+RVGDLFR RY  RAGWAHS LF AELP FRARL  +L  EM EF  SEK AK
Sbjct:   17 WTDLQVPPPELQPEFCLVSGQCFSFKPCEAEAGAVEAPSDGAGDGVSDSKEWVGVIGRGVYHIRQTEQTTLFRCLHHSRYSSDGS-----------ECVAEVREFFRLHTEMAPLYRRWEGADARMRQIVPALRGARVIQQDATECLFTFICSSNNNISRITLMIDRLKRHYGDLIATITSPTPTLTGAALQEHQDSISRDGSGGGLRXXXXXXXXXXXXXXXEHAGSGYSWYSFPTIDRLAAASEQGLRSIGLGYRAKSVVETAKALKELGGEAFLQKLKSPTMTRQEVQKELLQFRGVGRKVADCVGLFSLDRFDAIPVDTHVWRIACRDLDRSLQSAKSLTPAVYDRVGDLFRDRYGSRAGWAHSLLFTAELPAFRARLPASLQQEMSEFAVSEKEAK 406          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: B5YNS8_THAPS (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNS8_THAPS)

HSP 1 Score: 278 bits (712), Expect = 5.930e-89
Identity = 158/310 (50.97%), Postives = 204/310 (65.81%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWREA-SPHTWTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQ-PLPVRAEGGRLARAARGEVDQGAAGDRNTYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRG-GGRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPN-LQRAKSITPVIYERVGDLFRA 918
            W DL  +PEELRP  TL  GQCFNW        W G LG+RVL+I++TP TTL+  + G  ++GST             + L+QYF+L+T L+PL   W+ AD R++ +A  +PGVR++RQ+P+EC+FSFICSSNNNI RIT ML+  R KYG   + V ++ G           +G A      + FPT+E L  ATE+ELRG+G GYR++Y+ ET +LL   GG ++L+GLR       VQ+ LT FSG+GRKVADC ALFSLDQD AIPVD HV  IA RD+DP  L  AKS+TP IY+RVGDLFR+
Sbjct:    5 WVDLKVAPEELRPSSTLTNGQCFNWMSHHDAKEWIGPLGNRVLSIKETPTTTLFRIVHG-PTEGST-------------EYLQQYFRLETALSPLYKEWSKADDRLSKIATAIPGVRILRQEPVECMFSFICSSNNNIPRITKMLAAFREKYGTFMIDVPSQNG-----------EGIA-----LYTFPTIESLSEATEDELRGMGLGYRSKYITETRDLLVKSGGEEYLIGLRSLTDAQVVQDELTKFSGIGRKVADCVALFSLDQDDAIPVDVHVQHIASRDYDPTVLGGAKSLTPTIYKRVGDLFRS 284          
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Match: A0A0G4HDJ4_9ALVE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HDJ4_9ALVE)

HSP 1 Score: 290 bits (742), Expect = 5.940e-89
Identity = 193/473 (40.80%), Postives = 234/473 (49.47%), Query Frame = 1
Query:    1 WHDLCASPEELRPEFTLNMGQCFNWR------------------EASPH-----------TWTGVLGSRVLAIRQTPETTLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAAADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRKYGQ---------PL-------------------------------------------------------------PVRAEGGR-LARAARGEVDQG-------AAGDRN--------------TYHAFPTLEVLCGATEEELRGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRLAVQEALTAFSGVGRKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERVGDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAKAE 1056
            W+DL  +PE+LR +  L  GQ F W+                  +ASP            +W GVLG  ++  +QT +T  + CL        +    G      L   LR YFQL  PLAPL   W+AAD RM  V+  LPG+RV+ QDP ECL SFICSSNNNIARI+L+L RLR  +G          PL                                                             P+  +GG  LAR+     D G       A  DR               T++ FP++E LC   E++LR +G GYRAR V ETA  ++ARGGR+WL  LRG  R  V EAL  F GVGRKVADC  LFSL Q  AIPVDTHVWR ACRD DP+L   KS+TP +YERVG+LFR R++  AGWAH+ +FAAEL  FR  L   L  EMEEFR SEK  KAE
Sbjct:   17 WYDLETTPEDLRLDHCLVTGQTFQWKPSLEEGMKRDSPVVEKNKKASPEEEENAATLRPTSWIGVLGENLMQFQQTEQTVRFRCL-------GSSAVTGPPSEEDLRSELRSYFQLGEPLAPLYDRWSAADKRMECVSGVLPGLRVIEQDPWECLISFICSSNNNIARISLILDRLRENFGPLICKRGDVLPLLSGAAARDWRESLGGLTAREEEGGDNSPDHRREVPPSASLSPMEWAQEGTRETEAAVCPTAPLHTQGGSPLARSENRNGDSGPLQPPYTALEDRGGASSMPLSQCVQTYTWYGFPSVEALCEVDEQKLREIGLGYRARSVRETALEVKARGGREWLESLRGAPREEVLEALLKFRGVGRKVADCVGLFSLRQTEAIPVDTHVWRFACRDLDPSLASCKSLTPTVYERVGNLFRNRFSPCAGWAHALIFAAELRAFRPLLPVDLQKEMEEFRESEKEWKAE 482          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig64.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R5_ECTSI1.260e-11754.65DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A4D9CXL3_9STRA1.860e-10450.52DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A8J5XJ63_DIALT2.370e-10250.70DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S2DRB9_9STRA1.450e-10147.55DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A7S1CUH0_9STRA8.860e-9748.88DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A6U6FTQ8_9STRA9.260e-9748.43DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S2WTD5_9STRA6.970e-9654.38DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A0G4ECR9_VITBC7.740e-9645.39DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=... [more]
B5YNS8_THAPS5.930e-8950.97DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A0G4HDJ4_9ALVE5.940e-8940.80DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig64contigP-wetherbeei_contig64:10886..12888 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G4R5
Preferred nameOGG1
PFAMsHhH-GPD,OGG_N
Model size1128
Max annot lvl2759|Eukaryota
KEGG rclassRC00376
KEGG koko:K01809,ko:K03660,ko:K08193,ko:K11348,ko:K18081,ko:K20315
KEGG TC2.A.1.14
KEGG ReactionR01819
KEGG Pathwayko00051,ko00520,ko00562,ko01100,ko01110,ko01130,ko03410,ko04070,map00051,map00520,map00562,map01100,map01110,map01130,map03410,map04070
KEGG ModuleM00114
Hectar predicted targeting categoryother localisation
GOsGO:0000702,GO:0000723,GO:0000731,GO:0000775,GO:0001101,GO:0002526,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0006139,GO:0006220,GO:0006244,GO:0006259,GO:0006278,GO:0006281,GO:0006282,GO:0006284,GO:0006285,GO:0006289,GO:0006301,GO:0006304,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0006979,GO:0006996,GO:0007004,GO:0007568,GO:0007584,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008534,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009719,GO:0009725,GO:0009889,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010468,GO:0010556,GO:0010605,GO:0010833,GO:0010941,GO:0014070,GO:0015631,GO:0016043,GO:0016363,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019985,GO:0031323,GO:0031324,GO:0031326,GO:0031518,GO:0031667,GO:0031974,GO:0031981,GO:0032200,GO:0032355,GO:0032356,GO:0032357,GO:0032502,GO:0032991,GO:0033273,GO:0033554,GO:0033683,GO:0033993,GO:0034039,GO:0034399,GO:0034404,GO:0034599,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0042221,GO:0042493,GO:0042592,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045007,GO:0045008,GO:0045471,GO:0045738,GO:0045934,GO:0046386,GO:0046434,GO:0046483,GO:0046677,GO:0046686,GO:0046700,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0051276,GO:0051593,GO:0051716,GO:0055086,GO:0060249,GO:0060255,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0070887,GO:0070987,GO:0071241,GO:0071248,GO:0071276,GO:0071704,GO:0071840,GO:0071897,GO:0072527,GO:0072529,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0097159,GO:0097305,GO:0098687,GO:0140078,GO:0140097,GO:1901135,GO:1901136,GO:1901291,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001141
Exons7
Evalue2.07e-118
EggNOG OGsCOG0122@1|root,KOG2875@2759|Eukaryota
Ec32 ortholog descriptionendonuclease III/similar to 8-oxoguanine DNA glycosylase isoform 1b
Ec32 orthologEc-20_000660.1
EC3.1.3.64,3.1.3.95,4.2.99.18,5.3.1.8
Description8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
Cds size1128
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko02000,ko03036,ko03400,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig64.2.1prot_P-wetherbeei_contig64.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig64 10886..12888 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186910.2018356-CDS-P-wetherbeei_contig64:10885..110931683186910.2018356-CDS-P-wetherbeei_contig64:10885..11093Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 10886..11093 -
1683186910.2122407-CDS-P-wetherbeei_contig64:11252..113331683186910.2122407-CDS-P-wetherbeei_contig64:11252..11333Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 11253..11333 -
1683186910.220555-CDS-P-wetherbeei_contig64:11482..115651683186910.220555-CDS-P-wetherbeei_contig64:11482..11565Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 11483..11565 -
1683186910.2296512-CDS-P-wetherbeei_contig64:11780..120301683186910.2296512-CDS-P-wetherbeei_contig64:11780..12030Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 11781..12030 -
1683186910.2518744-CDS-P-wetherbeei_contig64:12257..122951683186910.2518744-CDS-P-wetherbeei_contig64:12257..12295Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 12258..12295 -
1683186910.2725835-CDS-P-wetherbeei_contig64:12336..125781683186910.2725835-CDS-P-wetherbeei_contig64:12336..12578Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 12337..12578 -
1683186910.2823617-CDS-P-wetherbeei_contig64:12662..128881683186910.2823617-CDS-P-wetherbeei_contig64:12662..12888Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig64 12663..12888 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig64.2.1

>prot_P-wetherbeei_contig64.2.1 ID=prot_P-wetherbeei_contig64.2.1|Name=mRNA_P-wetherbeei_contig64.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=376bp
WHDLCASPEELRPEFTLNMGQCFNWREASPHTWTGVLGSRVLAIRQTPET
TLYSCLSGLRSDGSTGTYLGAGGSSKLEQALRQYFQLDTPLAPLRAGWAA
ADARMAAVAEGLPGVRVVRQDPLECLFSFICSSNNNIARITLMLSRLRRK
YGQPLPVRAEGGRLARAARGEVDQGAAGDRNTYHAFPTLEVLCGATEEEL
RGLGFGYRARYVVETAELLRARGGRDWLLGLRGGGRLAVQEALTAFSGVG
RKVADCTALFSLDQDAAIPVDTHVWRIACRDFDPNLQRAKSITPVIYERV
GDLFRARYTQRAGWAHSTLFAAELPPFRARLQQALVCEMEEFRASEKAAK
AEAKGAAKAAKAAASTAASGTSQAS*
back to top

mRNA from alignment at P-wetherbeei_contig64:10886..12888-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig64.2.1 ID=mRNA_P-wetherbeei_contig64.2.1|Name=mRNA_P-wetherbeei_contig64.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2003bp|location=Sequence derived from alignment at P-wetherbeei_contig64:10886..12888- (Phaeothamnion wetherbeei SAG_119_79)
TGGCACGACCTGTGTGCCTCCCCCGAGGAGCTCCGCCCCGAATTCACGCT TAACATGGGGCAGTGCTTCAACTGGCGCGAGGCTTCGCCGCACACGTGGA CCGGCGTACTCGGTTCTCGAGTCCTGGCGATCCGCCAGACACCAGAGACG ACGTTATACAGCTGCCTCAGCGGGCTACGGAGCGATGGCAGCACCGGCAC ATATCTCGGCGCTGGCGGCAGCAGCAGTGCTTCCGGCGGCGATAATGATG GCGGCGAGAGCAGCGGCGACGGCGACGGCAATTCTAGCCGAGGCACTGGC GACGGGGAAGAGCTTGAGCAGGCGCTCCGCCAGTACTTCCAGCTGGACAC ACCGCTGGCGCCCCTGCGGGCTGGCTGGGCCGCAGCGGACGCACGCATGG CCGCTGTGGCCGAGGGGCTCCCCGGAGTGCGTGTCGTGCGGCAGGATCCG CTCGAATGCCTTTTTTCGTTCATTTGCTCGAGCAACAACAACATCGCCCG CATCACACTCATGCTCAGCCGCCTGCGGAGGAAGTACGGCCAGCCGCTCC CGGTCGAGCTGCCTGAGGCCTTCGCCGAGGAGCTCTTTGGCAGGTGAGAG CGGAGGGGGGAAGACTGGCTAGGGCTGCTCGGTTTTAGAGAGCGAACCAC GGCTCCCAGAGTTGCACATTTAATTCATCGATCCGGCACCAGGCGACGTT TTCCTTTTGCTGTAGTATGAGTACACTTTTCTAGCGCCTGATTTGTCCTG CGAAGGGCAGCACGTGTTTCATGGGATTTTCTTTCAGCAATGCCTGCTTG GGCCGGCCTTGTGCAACAGAGAAAACGGCGGCCGCTCTCATCCTTTTTAC TGCGGCAGGGGAGAGGTGGACCAGGGAGCCGCCGGCGACAGAAACACGTA CCACGCGTTTCCGACGCTGGAGGTGCTGTGCGGCGCCACGGAGGAGGAGC TGCGCGGCCTCGGCTTCGGCTACCGTGCACGCTACGTCGTCGAGACGGCC GAGCTCCTGCGGGCCCGCGGCGGCCGGGATTGGCTGCTCGGCCTGCGCGG CGGAGGGCGGCTCGCCGTTCAGGAAGCGCTCACTGCGTTCAGCGGCGTCG GGCGCAAGGTGAGCTTGCACGGGTCAGCGATGAAAGTGTTCTCATGTTCG ACCTAACCGTTTTCTTTCCCTCTTTCTCTCTTTCCTTTTTCTCTGGAATT GTAGGAATGAATATTGGTCCTGCAACCGGCGAAGAAAGTAAAATATCCAC GTCCTCTTGCCTGCGTTGTGCGATGCATTTTTTGTACTTTAGCCTTCACT TTGTTCCTACCTTTCTGTTTCAGGTGGCGGATTGCACGGCACTCTTTTCA TTGGATCAGGATGCGGCGATACCGGTCGACACGCATGTGTGGCGCATCGC TTGTAGGTGCGTGCGGCAGGACGCTCTCCCTAGGGCACTCGTCCTTTCTA GAAAATCGCGCAATTGTTAATGCCTTCTTCTTCTCCTGAGCATCAGGACT AGCATCGTGCATAAATCTCGCTGTCCCATGAAAACGTTTCTCCCGCAACC GGTAGGGATTTTGACCCAAATCTGCAACGTGCAAAGTCCATTACTCCCGT GATCTACGAACGCGTCGGGGACCTTTTTCGCGCGCGGTGAGATTTACTTC CGCTTGGATTGTCTTGTTTTGTTTTCCGACCCGAGCAAGTTTGGATTCCA CTAATGAGTATATGGAACAGGCGCGTAGCACATAAGCAGCTTTCCGCTCG GTCTCACTCCAACTTGTTGCCAACACTCCCATCCTTCACGATCAGGTACA CCCAGCGGGCGGGGTGGGCGCACAGCACACTGTTTGCGGCGGAGCTGCCG CCCTTTCGGGCTCGCCTTCAGCAGGCACTGGTATGCGAGATGGAAGAATT CCGTGCTTCTGAGAAGGCGGCAAAGGCGGAGGCAAAGGGTGCGGCAAAGG CTGCCAAGGCTGCGGCATCCACGGCGGCATCGGGGACTAGTCAGGCATCT TGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig64:10886..12888-

>mRNA_P-wetherbeei_contig64.2.1 ID=mRNA_P-wetherbeei_contig64.2.1|Name=mRNA_P-wetherbeei_contig64.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1128bp|location=Sequence derived from alignment at P-wetherbeei_contig64:10886..12888- (Phaeothamnion wetherbeei SAG_119_79)
TGGCACGACCTGTGTGCCTCCCCCGAGGAGCTCCGCCCCGAATTCACGCT
TAACATGGGGCAGTGCTTCAACTGGCGCGAGGCTTCGCCGCACACGTGGA
CCGGCGTACTCGGTTCTCGAGTCCTGGCGATCCGCCAGACACCAGAGACG
ACGTTATACAGCTGCCTCAGCGGGCTACGGAGCGATGGCAGCACCGGCAC
ATATCTCGGCGCTGGCGGCAGCAGCAAGCTTGAGCAGGCGCTCCGCCAGT
ACTTCCAGCTGGACACACCGCTGGCGCCCCTGCGGGCTGGCTGGGCCGCA
GCGGACGCACGCATGGCCGCTGTGGCCGAGGGGCTCCCCGGAGTGCGTGT
CGTGCGGCAGGATCCGCTCGAATGCCTTTTTTCGTTCATTTGCTCGAGCA
ACAACAACATCGCCCGCATCACACTCATGCTCAGCCGCCTGCGGAGGAAG
TACGGCCAGCCGCTCCCGGTGAGAGCGGAGGGGGGAAGACTGGCTAGGGC
TGCTCGGGGAGAGGTGGACCAGGGAGCCGCCGGCGACAGAAACACGTACC
ACGCGTTTCCGACGCTGGAGGTGCTGTGCGGCGCCACGGAGGAGGAGCTG
CGCGGCCTCGGCTTCGGCTACCGTGCACGCTACGTCGTCGAGACGGCCGA
GCTCCTGCGGGCCCGCGGCGGCCGGGATTGGCTGCTCGGCCTGCGCGGCG
GAGGGCGGCTCGCCGTTCAGGAAGCGCTCACTGCGTTCAGCGGCGTCGGG
CGCAAGGTGGCGGATTGCACGGCACTCTTTTCATTGGATCAGGATGCGGC
GATACCGGTCGACACGCATGTGTGGCGCATCGCTTGTAGGGATTTTGACC
CAAATCTGCAACGTGCAAAGTCCATTACTCCCGTGATCTACGAACGCGTC
GGGGACCTTTTTCGCGCGCGGTACACCCAGCGGGCGGGGTGGGCGCACAG
CACACTGTTTGCGGCGGAGCTGCCGCCCTTTCGGGCTCGCCTTCAGCAGG
CACTGGTATGCGAGATGGAAGAATTCCGTGCTTCTGAGAAGGCGGCAAAG
GCGGAGGCAAAGGGTGCGGCAAAGGCTGCCAAGGCTGCGGCATCCACGGC
GGCATCGGGGACTAGTCAGGCATCTTGA
back to top