mRNA_P-wetherbeei_contig6393.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6393.1.1
Unique NamemRNA_P-wetherbeei_contig6393.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: D7FIB1_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB1_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.380e-29
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGL-RCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLLQ 456
            Y ++V+  T SVVL+IRGT  + D + DLV ++  F+GG  H G+ + AE L    +  +  ++ +  G+RLV+TGHSLG GV++L+T +L R ++ LGL    V C+A+APPPVF PLD    E    I   V   D V RM+L SA+ L +
Sbjct:   68 YVLTVDHATESVVLSIRGTFSMQDTVTDLVCDSADFMGGSCHRGLRQGAEMLLADAKSDVLQQLNRHRGYRLVVTGHSLGGGVSILLTMMLLRRKSELGLGSTRVLCYAFAPPPVFGPLDKLSRETKRAIRSFVFGNDMVCRMSLASAYELFR 220          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A6H5JNB4_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 9.290e-29
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGL-RCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLLQ 456
            Y ++V+  T SVVL+IRGT  + D + DLV ++  F+GG  H G+ + AE L    +  +  ++ +  G+RLV+TGHSLG GV++L+T +L R R+ LGL    V C+A+APPPVF PL+    E    I   V   D V RM+L SA+ L +
Sbjct:  193 YVLTVDHATESVVLSIRGTFSMQDTVTDLVCDSADFMGGSCHRGLRQGAEMLLAVAKSDVLQQLNRHRGYRLVVTGHSLGGGVSILLTMMLLRRRSELGLGSTRVLCYAFAPPPVFGPLEKLSGETQWAIRSFVFGNDMVSRMSLASAYELFR 345          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: R7QK80_CHOCR (Lipase_3 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK80_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 3.270e-27
Identity = 64/150 (42.67%), Postives = 94/150 (62.67%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRL 450
            +F++V+   +S+V+AIRGT  +SD+I DL+ +  PF GG +H G+ RAAE LY  +   L + +AK   + + +TGHSLGAGVA+L+T +L  +    G   +VKC+A AP PVF P+    +E S  + C VH  D V ++ L SA  L
Sbjct:  303 HFVAVDEREKSIVVAIRGTNSISDIITDLLCDNEPFAGGYAHGGMKRAAESLYTAILPTLRSALAKYPSYIIAVTGHSLGAGVAILLTKVLLMN----GFT-DVKCYAIAPCPVFGPMHRVDSEWSDALECFVHHHDLVAKLCLASARNL 447          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A7S0DSP5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DSP5_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 3.880e-27
Identity = 59/159 (37.11%), Postives = 96/159 (60.38%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRA--------ALGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLL 453
            +F++++  T+SVVL+IRGT  ++D + DL+ + R  LGG +H G++R+A  +     D +   ++K  G+RLV+TGHSLGAGV+++ + LL + R          L    E+  FA++PPP+F PL A     + ++   +H  DCVPR++  S  R L
Sbjct:   31 HFVAIDDQTKSVVLSIRGTATVADALTDLLCDRRGILGGYAHDGIVRSAFAVLSSAEDAIIESLSKNPGYRLVITGHSLGAGVSIMASLLLLKARIHGSFPGVPTLPKESEIHTFAFSPPPLFTPLWALSDAMTEHMHVFIHGEDCVPRLSFDSVSRAL 189          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A7S0R525_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R525_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 3.930e-27
Identity = 62/152 (40.79%), Postives = 97/152 (63.82%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLG--FRLVLTGHSLGAGVAVLMTGLLARDRAALGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRL 450
            ++I+++   R+VVL++RG+M + D + DLV E+  FL G++HAG+   A  +  + R+ L   + +     ++LV+TGHSLGAG A+L+T LL  D   + + C+V+C+A+APPPVF PL+         I C V+R D VPR++L S  RL
Sbjct:  239 FYIALDHNMRAVVLSVRGSMSVGDTLTDLVCESTAFLSGEAHAGIAAGANNVLAQARETLVDVLTRFSDEEYKLVVTGHSLGAGTAILLTMLLLDDP--IFVTCQVECWAFAPPPVFTPLEKISPRCHRAIKCFVYRNDLVPRLSLFSVRRL 388          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A1Z5KQY0_FISSO (Lipase_3 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQY0_FISSO)

HSP 1 Score: 114 bits (285), Expect = 1.110e-26
Identity = 60/151 (39.74%), Postives = 93/151 (61.59%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLL 453
            +F++V+ I + VVLAIRGT   S+++ D+ A++RPF GG++HA +   AE++++  R+ +   +     + LVLTGHSLGAG A L+  L  +D   L     V+CFAYA PPVF+PL+  P  A  +    ++  D VP +++ S   LL
Sbjct:  318 HFVAVDHINQQVVLAIRGTFSFSEIVVDVAAQSRPFCGGEAHAEMANMAERVWEAARETVMKVLRSNENYELVLTGHSLGAGTACLLHILCHQDERKLVEGRNVRCFAYATPPVFSPLEFVPKSALNSCTAYIYDRDVVPFLSVDSVRHLL 468          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A7S1AQP4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AQP4_NOCSC)

HSP 1 Score: 111 bits (277), Expect = 4.590e-26
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDR---AALGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLLQ 456
            +FI+ +P+T  +VLAIRGT   +D + D +AE  PFLGG +H G+   A  + +  RD+L  E+    G +L +TGHSLGAG AVL+  +L  +    A         C+A+A PPVF P +  P   S+NI   VH  D +PR+ L + F L Q
Sbjct:  143 FFIATDPLTDQLVLAIRGTADATDALTDTLAEKSPFLGGNAHLGMFECATSVIEHGRDKLV-ELMTGTGKKLSVTGHSLGAGTAVLVMLMLCGESGYSAPFSAGRNTTCWAFAAPPVFGPPEKIPRWTSSNIFAFVHHVDMIPRLGLAAVFSLCQ 296          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A2V3IYH3_9FLOR (Sn1-specific diacylglycerol lipase alpha n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYH3_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 1.750e-25
Identity = 63/151 (41.72%), Postives = 89/151 (58.94%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLL 453
            +F++++   RS+V+AIRGT  +SDVI DL+ E  PF GG +H G+ +A+E LY  L   L     K     +V+TGHSLG GVAVL+T +L  +  A     +VKC+A AP PVF P      + S  + C +H  D VP +   SA +L+
Sbjct:  262 HFVALDEKHRSIVIAIRGTNSISDVITDLLCENEPFAGGYAHRGMKKASEALYTSLLPTLRTASIKYRNHSIVVTGHSLGGGVAVLLTKILLMNGFA-----DVKCYAIAPCPVFGPRHKIDPDWSDAVECFIHADDLVPTLCFTSARQLV 407          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A7S3FHY2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FHY2_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 7.510e-24
Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 1
Query:    1 YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGLRCE-------------VKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLL 453
            +F++V   T ++VLA+RGT  +SD I D+VA   PF GG +HAG+ R A  ++      +  ++A   G+ LV+ GHSLGAGVA L+T  L  +RA    R               ++CFA+A PPV+APL + P  +   +   V   DCVP +++ +  RLL
Sbjct:  209 HFVAVNHSTSAIVLALRGTASVSDAIHDVVAYAEPFCGGSAHAGMARMARNVWAAAGPAVVEQLASNEGYGLVICGHSLGAGVAALLTLYLYEERAKRSSRSSAATHSPIPSQATRIRCFAFACPPVYAPLSSAPPGSLDAVAAFVGGVDCVPTLSVAAG-RLL 371          
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Match: A0A553P330_TIGCA (Lipase_3 domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P330_TIGCA)

HSP 1 Score: 105 bits (262), Expect = 1.530e-23
Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 1
Query:   31 SVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAEQLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAA-LGLRCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRLL 453
            S++L+IRGT  L+DVI DL+ +   FL G +H G+MR + ++ ++++D L   + K   +RL+LTGHSLGAG A L+T ++ +++   +    E++C A APPPV+      P +    I   ++  DCVPRM LGS  +LL
Sbjct:  327 SLILSIRGTHSLTDVIIDLICDDEEFLDGHAHRGIMRGSCKVLNEVKDILHQTLLKYPRYRLILTGHSLGAGTAELLTMVILKEKEKYVPKETEIQCVAIAPPPVYRTDSQVPKDMKDAINIYINNQDCVPRMCLGSIAKLL 468          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6393.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB1_ECTSI1.380e-2942.48Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JNB4_9PHAE9.290e-2942.48Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
R7QK80_CHOCR3.270e-2742.67Lipase_3 domain-containing protein n=1 Tax=Chondru... [more]
A0A7S0DSP5_9EUKA3.880e-2737.11Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S0R525_9CHLO3.930e-2740.79Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A1Z5KQY0_FISSO1.110e-2639.74Lipase_3 domain-containing protein n=2 Tax=Fistuli... [more]
A0A7S1AQP4_NOCSC4.590e-2640.65Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A2V3IYH3_9FLOR1.750e-2541.72Sn1-specific diacylglycerol lipase alpha n=1 Tax=G... [more]
A0A7S3FHY2_9EUKA7.510e-2437.80Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A553P330_TIGCA1.530e-2340.14Lipase_3 domain-containing protein n=1 Tax=Tigriop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6393contigP-wetherbeei_contig6393:624..1492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FIB1
PFAMsLipase_3
Model size456
Max annot lvl2759|Eukaryota
KEGG koko:K13806
KEGG Pathwayko04723,ko04745,ko04925,map04723,map04745,map04925
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.26e-30
EggNOG OGsKOG2088@1|root,KOG2088@2759|Eukaryota
Descriptionretrograde trans-synaptic signaling by lipid
Cds size456
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186909.774412-CDS-P-wetherbeei_contig6393:623..8461683186909.774412-CDS-P-wetherbeei_contig6393:623..846Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6393 624..846 -
1683186909.7862673-CDS-P-wetherbeei_contig6393:1259..14921683186909.7862673-CDS-P-wetherbeei_contig6393:1259..1492Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6393 1260..1492 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6393.1.1prot_P-wetherbeei_contig6393.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6393 624..1492 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6393.1.1

>prot_P-wetherbeei_contig6393.1.1 ID=prot_P-wetherbeei_contig6393.1.1|Name=mRNA_P-wetherbeei_contig6393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
YFISVEPITRSVVLAIRGTMLLSDVIADLVAETRPFLGGKSHAGVMRAAE
QLYDKLRDRLAAEMAKRLGFRLVLTGHSLGAGVAVLMTGLLARDRAALGL
RCEVKCFAYAPPPVFAPLDAFPTEASANIVCVVHRADCVPRMTLGSAFRL
LQ
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mRNA from alignment at P-wetherbeei_contig6393:624..1492-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6393.1.1 ID=mRNA_P-wetherbeei_contig6393.1.1|Name=mRNA_P-wetherbeei_contig6393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=869bp|location=Sequence derived from alignment at P-wetherbeei_contig6393:624..1492- (Phaeothamnion wetherbeei SAG_119_79)
TATTTCATTTCAGTCGAGCCCATAACGCGCTCTGTCGTGCTGGCGATCCG CGGCACCATGCTGCTCAGCGACGTCATCGCCGATCTCGTGGCGGAGACGA GGCCGTTCCTGGGCGGAAAGTCGCACGCGGGCGTGATGCGGGCGGCGGAG CAGCTTTATGACAAGCTGCGGGACCGACTGGCGGCGGAGATGGCGAAGCG GTTGGGCTTCCGGCTTGTGCTGACGGGCCACAGGTGAGGGATGAAGAAGG GCTGGAGCAGAAGATACCGAGGACGGCGACGGTGTCTTTCTCTCCTCGCC GTAAGCTGTCTTTCCGCTTTTTGCGGATGCGGACCAGCCCTTAAACCTTA TCGAAAGATTAAGGCGTAATTGGCTTTGGGCGACTAGGAAGGAATTTCTC TCCTCTTCTAGGTCCTTTCCCGCTCCTTTACCTGCCATCGCTGCCGCTCC TTTTGTCGTCTCCAGCCGCCCGCCCCCTTCACGCTTTCTTTCATGGCTAA CTGTTTTCCTTGACCTTTTCTTGCCGTCGCCGGTGCCCGCACTGGCTGCC GCCGCCGCCACTACCGCCGCCGCTACCGCCGCCGCTGCCGCTGTGATTGG CGCCTTCCTACATATATCCTCCTACTGCTGCGTCGGCGATGGCCAGCCTT GGCGCCGGCGTTGCTGTGCTGATGACGGGGCTCCTCGCCCGCGACCGCGC CGCGCTCGGGCTCCGCTGCGAGGTCAAGTGCTTCGCCTACGCGCCACCTC CCGTCTTCGCGCCGCTTGACGCCTTTCCCACTGAGGCGTCGGCGAACATT GTGTGCGTGGTGCATCGCGCGGACTGCGTGCCGCGGATGACGCTTGGCTC GGCCTTCCGCCTGCTGCAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6393:624..1492-

>mRNA_P-wetherbeei_contig6393.1.1 ID=mRNA_P-wetherbeei_contig6393.1.1|Name=mRNA_P-wetherbeei_contig6393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig6393:624..1492- (Phaeothamnion wetherbeei SAG_119_79)
TATTTCATTTCAGTCGAGCCCATAACGCGCTCTGTCGTGCTGGCGATCCG
CGGCACCATGCTGCTCAGCGACGTCATCGCCGATCTCGTGGCGGAGACGA
GGCCGTTCCTGGGCGGAAAGTCGCACGCGGGCGTGATGCGGGCGGCGGAG
CAGCTTTATGACAAGCTGCGGGACCGACTGGCGGCGGAGATGGCGAAGCG
GTTGGGCTTCCGGCTTGTGCTGACGGGCCACAGCCTTGGCGCCGGCGTTG
CTGTGCTGATGACGGGGCTCCTCGCCCGCGACCGCGCCGCGCTCGGGCTC
CGCTGCGAGGTCAAGTGCTTCGCCTACGCGCCACCTCCCGTCTTCGCGCC
GCTTGACGCCTTTCCCACTGAGGCGTCGGCGAACATTGTGTGCGTGGTGC
ATCGCGCGGACTGCGTGCCGCGGATGACGCTTGGCTCGGCCTTCCGCCTG
CTGCAA
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