mRNA_P-wetherbeei_contig6390.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: A0A6H5L6Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z5_9PHAE) HSP 1 Score: 140 bits (352), Expect = 2.040e-32 Identity = 87/211 (41.23%), Postives = 110/211 (52.13%), Query Frame = 2
Query: 101 ADMKCVTFIRHAVGVHNDAAACLGYDA----YKDEVYSDARLSPAGVAAAREARHILGALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGISETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIETLLARIA 721
A + CV+F+RH++ HN+AAA DA Y E Y+D+ LS G A R AR + L P P +V+ SPLTRAVQTAI +F G+G +PI A RE +G PCDR R ++EL FG +VDFS D W P RE M L RR A F+ +LRR HV VV+HGVFIE L ++A
Sbjct: 63 AGLTCVSFMRHSIATHNEAAAASA-DAMGSVYLSEAYADSSLSSRGHALVRRARQSMLGLSPAPSVVLCSPLTRAVQTAIAMFGGSG------------------------------IPIVAVPEAREAYGRFPCDRHRDKSELELMFGDSVDFSLCPVQDTTWSPHHREEMSQLDRRVAGFVDDLLRREAGHVFVVSHGVFIEAALRQLA 242
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: W7T5P9_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5P9_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.920e-24 Identity = 81/200 (40.50%), Postives = 108/200 (54.00%), Query Frame = 2
Query: 110 KCVTFIRHAVGVHNDAAACLGYDAYKDEVYSDARLSPAGVAAAREARHILGALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGISETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIETLL 709
K + +RH + VHN G D + DA L+ GVA A ARH + AL+P + VITSPLTRA+QT ++ S G+G + + G I A E RE +G+ D+RR TEL A F VDFS +SE D+LW RES+E + RA FL +L RPERHV++V+HGVF++ LL
Sbjct: 38 KVLHLLRHGIAVHNQPN---GQDLPPASLL-DACLTAQGVAQAHAARHTIQALQP--QFVITSPLTRALQTTTIIM---------------SPENAGVGNEDNNRTEGKSTRIVAVELVREAYGVLLPDKRRNATELQAAFRPTVDFSLLSEEDQLWTASQRESLESVRGRARKFLHELLPRPERHVLLVSHGVFLQCLL 216
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: K8Z5B4_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5B4_NANGC) HSP 1 Score: 105 bits (262), Expect = 2.780e-22 Identity = 75/192 (39.06%), Postives = 99/192 (51.56%), Query Frame = 2
Query: 101 ADMKCVTFIRHAVGVHNDAAACLGYDAYKDEVYSDARLSPAGVAAAREARHILGALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGISETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVV 676
A K + +RH + VHN G D + DA L+ GVA A ARH + AL+P + VITSPLTRA+QT ++ S G+G + + G I A E RE +G+ D+RR TEL A F VDFS +SE D+LW RES+E + RA FL +L RPERHV++
Sbjct: 43 AVFKVLHLLRHGIAVHNQPN---GQDLPPASLL-DACLTAQGVAQAHAARHTIQALQP--QFVITSPLTRALQTTTIIM---------------SPENAGVGNEDNNRTEGKSTRIVAVELVREAYGVLLPDKRRNATELQAAFRPTVDFSLLSEEDQLWTASQRESLESVRGRARKFLHELLPRPERHVLL 213
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: D8LRC2_ECTSI (Catalytic, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC2_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.170e-21 Identity = 64/152 (42.11%), Postives = 78/152 (51.32%), Query Frame = 2
Query: 266 LRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGISETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIETLLARIA 721
L P P +V+ SPLTRAVQTAI +F G+G +PI A RE +G PCDR R R+EL FG +VDFS + D W P RE M L RR A F+ +LRR HV VV+HGVFIE L ++A
Sbjct: 4 LSPAPSVVLCSPLTRAVQTAIAMFGGSG------------------------------IPIVAVPEAREAYGRFPCDRHRDRSELELMFGDSVDFSLCAVQDTAWSPHHREEMSQLDRRVAGFVDGLLRREAGHVFVVSHGVFIEATLRQLA 125
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: B9GN63_POPTR (Uncharacterized protein n=10 Tax=Saliceae TaxID=238069 RepID=B9GN63_POPTR) HSP 1 Score: 99.8 bits (247), Expect = 5.270e-20 Identity = 75/204 (36.76%), Postives = 104/204 (50.98%), Query Frame = 2
Query: 110 KCVTFIRHAVGVHNDAAACLGYDAYKDEVYSDARLSPAGVAAAREAR---HILGALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGI-SETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIETLL 709
K + +RHA G+HN A ++A Y DA LSP G A R + G L +LVITSPL RA+QTAI +F G G + + C PI A+E CRE G+HPCD+RRT +E + F +DFS I S+ D LW+ +ARE+ E + R F+ + RPE+ + +V H F++ L
Sbjct: 16 KILHLVRHAQGIHNVAGE-KDHNALLSPEYFDAHLSPLGWQQAGNLRKQIYASGHLERI-DLVITSPLCRALQTAIQVFGSEGQINGSKEANIDNSGISSLKCP----------PIVASELCRERLGVHPCDKRRTISENRSRF-PTIDFSLIESDEDILWKTDARETDEEIAARGLKFMNWLWTRPEKEIAIVTHHRFLQHTL 206
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: Q8GWG7_ARATH (Phosphoglycerate mutase family protein n=8 Tax=Arabidopsis TaxID=3701 RepID=Q8GWG7_ARATH) HSP 1 Score: 99.0 bits (245), Expect = 1.510e-19 Identity = 72/206 (34.95%), Postives = 107/206 (51.94%), Query Frame = 2
Query: 110 KCVTFIRHAVGVHNDAAACLGYDAYKDEVYSDARLSPAGVAAAREARHIL--GALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGI-SETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIETLLARI 718
K + +RHA GVHN A G ++++ DA LSP G+ E R+ + L ELVITSPL RA++T+I +F G G I D ++ P PI A E CRE GL+PCDRR + + F +DF+ I S+ D LW+ + RE +E + R F+ + RPE+ + +V+HG+F++ L +
Sbjct: 17 KTLHLVRHAQGVHNIALEEKGEKPESEKLF-DAHLSPKGLQQVSERRNQILESGLLNTVELVITSPLCRAMETSIGIFRGQG--------------YVNISEDFAKANNFP--PIVALEICRERMGLYPCDRRASISTRRT-FFPEIDFTMIESDEDALWQDKEREKLEDVATRGLHFVKWLWERPEKEIAIVSHGIFLQQTLCAL 204
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: A0A803MUX6_CHEQI (Uncharacterized protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MUX6_CHEQI) HSP 1 Score: 99.4 bits (246), Expect = 1.840e-19 Identity = 76/203 (37.44%), Postives = 101/203 (49.75%), Query Frame = 2
Query: 110 KCVTFIRHAVGVHN-----DAAACLGYDAYKDEVYSDARLSPAGVAAAREAR-HILGA-LRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGISETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFI 697
K + +RHA G HN D A L YD Y DA L+ G R H+ G+ L +LVITSPLTR +QTA+ +F G GS G G + G P A E+CRE G+HPCD+RRT++E F A+DFS I D LW+ + RE+ E L R FL + R E+ + +V+H F+
Sbjct: 25 KTLHLVRHAQGYHNVAGEKDVKAYLSYD------YLDASLTSRGWEQVDNLRKHVQGSGLSKKIDLVITSPLTRTIQTAVGVFGG-GSYNDGVDVAPLMVADAGNSGRPAISSFG-CPPFLAVESCREHLGVHPCDKRRTKSEYETLF-PAIDFSLIENEDILWKEDVRETDEELAERGMKFLKWLWTRSEKEIAIVSHSGFL 218
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: M4EPT5_BRARP (Uncharacterized protein n=3 Tax=Brassica campestris TaxID=3711 RepID=M4EPT5_BRARP) HSP 1 Score: 96.7 bits (239), Expect = 9.480e-19 Identity = 76/210 (36.19%), Postives = 109/210 (51.90%), Query Frame = 2
Query: 110 KCVTFIRHAVGVHNDAAACLG-YDAYKDEVYS----DARLSPAGVA-AAREARHILGA-LRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGI-SETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIE-TLLA 712
K + +RHA G+HN A G D D +S DA LSP G+ +++ + IL + L ELVITSPL RA++TA+ +F G + + PI A E CRE GL+PCDRR + + F +DF+ + S+ D LWR E RE++E + R FL + RPE+ + VV+HG+F++ TLLA
Sbjct: 17 KTIYLVRHAQGIHNVALEEKGGIDEINDAHFSPRLLDAPLSPKGIQQVSKQRKQILESELLNTIELVITSPLRRAMETAVGIFRG----------------------QKAVNQSDNFPPIVALELCRERMGLYPCDRRESISTRRICF-PDIDFTMVESDEDALWREEERENLEEVSARGLRFLKWLWERPEKEIAVVSHGIFLQQTLLA 203
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: UPI000CE19A0B (phosphoglycerate mutase-like protein 1 n=2 Tax=Quercus suber TaxID=58331 RepID=UPI000CE19A0B) HSP 1 Score: 97.1 bits (240), Expect = 1.080e-18 Identity = 75/205 (36.59%), Postives = 101/205 (49.27%), Query Frame = 2
Query: 110 KCVTFIRHAVGVHN-----DAAACLGYDAYKDEVYSDARLSPAG---VAAAREARHILGALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVVPICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGISETDE-LWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFI 697
K + +RHA G+HN D A L YD + DA L+P G V R+ H G L +LV+ SPL RA+QTA+ +F G +G + GC + P P A E CRE G+HPCD+RR+ TE F AVDFS I D+ LW P+ RE E + R FL + R E+ + +V+H F+
Sbjct: 16 KTLHLVRHAQGIHNVEGEKDHDALLSYDLF------DANLTPLGWKQVDNLRKHVHACG-LSKRIDLVVVSPLLRAMQTAVGVFGGEAYRDGINVPPLMAANTGKSGCPAISSLNSP--PFVAVELCRERLGVHPCDKRRSNTEYRPLF-PAVDFSLIENDDDILWTPDIRERNEEVAARGQKFLKWLWTRKEKEIAIVSHNGFL 210
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Match: A0A0D3C8W9_BRAOL (Uncharacterized protein n=14 Tax=Brassica TaxID=3705 RepID=A0A0D3C8W9_BRAOL) HSP 1 Score: 96.3 bits (238), Expect = 1.290e-18 Identity = 73/209 (34.93%), Postives = 104/209 (49.76%), Query Frame = 2
Query: 104 DMKCVTFIRHAVGVHNDAAACLGYDAYKDEVYSDARLSPAGVAAAREARHILG--ALRPPPELVITSPLTRAVQTAILLFHGTGSGEGGXXXXXXSXXXXGIGCDSSQGGTGPVV----PICAAENCREGHGLHPCDRRRTRTELAAEFGAAVDFSGI-SETDELWRPEARESMEHLGRRAADFLAAVLRRPERHVVVVAHGVFIETLL 709
+ K + +RHA G+HN A A +++ DARLS G+ R + L +LVITSPL RA+QT++ +F G D++Q P V PI A E CRE GL+PCD+R + F + VDF+ I S+ D LW+ E RE ME + R FL + RPE+ + VV+HG+F++ L
Sbjct: 15 NFKTLRLVRHAQGIHNVAIEKGELTALSGKLF-DARLSQTGIQQVSNMRKEISKSGLLNTVQLVITSPLRRAMQTSVGIFRGQE--------------------DTNQSDIFPKVNHSPPIVALEICRERMGLYPCDKRESIGTYRTCF-SEVDFTMIESDEDTLWQAEEREDMEDVSARGLHFLKWLWERPEKDIAVVSHGIFLQQTL 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6390.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6390.1.1 >prot_P-wetherbeei_contig6390.1.1 ID=prot_P-wetherbeei_contig6390.1.1|Name=mRNA_P-wetherbeei_contig6390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=515bp MKCVTFIRHAVGVHNDAAACLGYDAYKDEVYSDARLSPAGVAAAREARHIback to top mRNA from alignment at P-wetherbeei_contig6390:929..2971- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6390.1.1 ID=mRNA_P-wetherbeei_contig6390.1.1|Name=mRNA_P-wetherbeei_contig6390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2043bp|location=Sequence derived from alignment at P-wetherbeei_contig6390:929..2971- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6390:929..2971- >mRNA_P-wetherbeei_contig6390.1.1 ID=mRNA_P-wetherbeei_contig6390.1.1|Name=mRNA_P-wetherbeei_contig6390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1545bp|location=Sequence derived from alignment at P-wetherbeei_contig6390:929..2971- (Phaeothamnion wetherbeei SAG_119_79)back to top |