mRNA_P-wetherbeei_contig6386.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A835YRL3_9STRA (Flagellar inner arm dynein light chain Tctex1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL3_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.680e-67 Identity = 93/116 (80.17%), Postives = 107/116 (92.24%), Query Frame = 1
Query: 4 DDAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
DDAA++SVEDVDTIVKNAI GCLTD YN KKVTDWTN IVDNCL+ELQSLNKPFKY+ITC++MQKNGAGL+T+ATM WD +KD+YCQVPW+NQNMHCIVTVYG AVN+DN+ EL+
Sbjct: 5 DDAAKYSVEDVDTIVKNAIAGCLTDVTYNAKKVTDWTNHIVDNCLRELQSLNKPFKYIITCIIMQKNGAGLNTSATMFWDPEKDNYCQVPWENQNMHCIVTVYGCAVNIDNTHELD 120
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: D7G6A0_ECTSI (Flagellar inner arm dynein light chain Tctex1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6A0_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.390e-53 Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 1
Query: 1 QDDAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
QDDAAEFS EDVDTIVKNAITGCLTD MYNPKK ELQ LNKP+KY+ITC++MQKNGAG++T A+M WD KD++CQVPW+NQNMHCIVTVYG AV++DN+ ELE
Sbjct: 4 QDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKK--------------ELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELE 106
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A6U1NWB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NWB1_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.460e-52 Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 1
Query: 1 QDDAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
QDDAAEFS EDV+T KNAI CL Y KKV DWTNTIVD CLKELQS+N+P+KYV+TC++MQKNGAG++T A+M WD KD C+V W+N +HCIVTV+GLAV++DN EL+
Sbjct: 4 QDDAAEFSQEDVETTAKNAIRSCLDKHNYQAKKVDDWTNTIVDTCLKELQSMNRPYKYVVTCIIMQKNGAGMNTTASMFWDTTKDGLCKVYWENHTIHCIVTVFGLAVHIDNQNELD 120
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A482SIW0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIW0_9ARCH) HSP 1 Score: 161 bits (407), Expect = 1.050e-48 Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 1
Query: 1 QDDAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
QDD+AEFS EDV+ IV+ AI L DA YN KKV +WTN IV NCLK+LQ L +PFKY+ITC++MQK GAGL+T +M WD KD YC+VPWQN M C VTVYGL+VN+D+ +++
Sbjct: 29 QDDSAEFSTEDVEGIVRLAIQNSLNDASYNSKKVNEWTNNIVTNCLKDLQGLGRPFKYIITCMIMQKTGAGLNTTTSMFWDTAKDGYCKVPWQNNTMTCTVTVYGLSVNIDDPQDVD 145
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A7S3JST1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JST1_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.130e-46 Identity = 70/115 (60.87%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 7 DAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
D F ED+++IVKNAIT L+D +YN KKV DW N+IVD CLKELQSLN+PFKYV+TC +MQKNGAGL T + WD KD +PW+N +MH I+TV+GLA+NVDN AE++
Sbjct: 2 DDESFPQEDIESIVKNAITSTLSDHLYNSKKVNDWINSIVDACLKELQSLNRPFKYVVTCGIMQKNGAGLDTGVALIWDHSKDGLVCIPWENTSMHVIITVFGLALNVDNLAEMD 116
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A7S2DAW6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAW6_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.140e-44 Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 19 FSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
FS EDVD+IVK AIT L D MYN KKV D N IVD CL+EL+ L +PF+Y++TC++MQKNGAG++TAATM WD KD C V W N M+ +VTV+GLAVN+DNS EL+
Sbjct: 8 FSPEDVDSIVKLAITQNLADVMYNQKKVNDQINKIVDKCLEELRKLERPFRYIVTCIIMQKNGAGMNTAATMFWDTSKDGKCVVQWSNDTMNVVVTVFGLAVNIDNSGELD 118
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A7R9W941_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W941_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.250e-40 Identity = 62/117 (52.99%), Postives = 86/117 (73.50%), Query Frame = 1
Query: 1 QDDAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
QD EF VEDV+T++KNAI L+DA Y K DW+N+++ LK L+SLN+P+KY IT +++QKNGAGL +A++ WDA KD C+V W+N MHC+VTV+G +VNVD+ EL+
Sbjct: 5 QDLGEEFVVEDVETVIKNAIGVVLSDASYISSKANDWSNSVISAALKGLESLNRPYKYCITVMIVQKNGAGLVSASSTYWDASKDGLCKVTWENSTMHCVVTVFGTSVNVDSPTELD 121
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: F0YFG3_AURAN (Uncharacterized protein DLC1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFG3_AURAN) HSP 1 Score: 137 bits (344), Expect = 1.610e-39 Identity = 61/115 (53.04%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 7 DAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVNVDNSAELE 351
D +F ED++ +VKNAI+ CL++ Y K V + + IVD CLKELQ+LN+PFKY++TC++MQKNGAGL T A + WD KD +PW+N M +VTV+G A+NVDN AEL+
Sbjct: 2 DEDQFPQEDIENLVKNAISACLSEFQYQAKLVNNKIHAIVDACLKELQTLNRPFKYIVTCIIMQKNGAGLDTGAALFWDNAKDGLVCIPWENSQMSVVVTVFGTALNVDNLAELD 116
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A5D6Y129_9STRA (Uncharacterized protein n=2 Tax=Pythium TaxID=4797 RepID=A0A5D6Y129_9STRA) HSP 1 Score: 127 bits (320), Expect = 7.650e-36 Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 13 AEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVN 327
+EFS EDV I K AI L DA+YN KKV DW+NT+V L LQ+LNKPFKY +TC++MQK GAG++TAA+ WD D YC V W+N ++C+V VYG A++
Sbjct: 6 SEFSQEDVLPIAKTAIEAALKDAVYNRKKVLDWSNTLVATVLTGLQNLNKPFKYAVTCMIMQKTGAGMATAASCYWDPTLDGYCTVLWENSTIYCMVAVYGAAIS 110
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Match: A0A0P1ABG3_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABG3_PLAHL) HSP 1 Score: 126 bits (317), Expect = 2.190e-35 Identity = 59/105 (56.19%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 13 AEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQSLNKPFKYVITCVVMQKNGAGLSTAATMRWDADKDSYCQVPWQNQNMHCIVTVYGLAVN 327
+EFS EDV I K AI L D +YN KKV DW+NT+V L LQSLNKPFKY +TC++MQK GAG++TAA WD D C V W+N ++CIVTVYG+A++
Sbjct: 6 SEFSQEDVLPIAKMAIEAALKDTVYNRKKVLDWSNTLVATVLAGLQSLNKPFKYAVTCLIMQKTGAGMATAAACFWDTTMDGNCTVLWENSTINCIVTVYGVAIS 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6386.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6386.1.2 >prot_P-wetherbeei_contig6386.1.2 ID=prot_P-wetherbeei_contig6386.1.2|Name=mRNA_P-wetherbeei_contig6386.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp QDDAAEFSVEDVDTIVKNAITGCLTDAMYNPKKVTDWTNTIVDNCLKELQback to top mRNA from alignment at P-wetherbeei_contig6386:1938..3462- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6386.1.2 ID=mRNA_P-wetherbeei_contig6386.1.2|Name=mRNA_P-wetherbeei_contig6386.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1525bp|location=Sequence derived from alignment at P-wetherbeei_contig6386:1938..3462- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6386:1938..3462- >mRNA_P-wetherbeei_contig6386.1.2 ID=mRNA_P-wetherbeei_contig6386.1.2|Name=mRNA_P-wetherbeei_contig6386.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig6386:1938..3462- (Phaeothamnion wetherbeei SAG_119_79)back to top |