mRNA_P-wetherbeei_contig6377.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6377.1.1
Unique NamemRNA_P-wetherbeei_contig6377.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: A0A389MF54_9BURK (MFS transporter n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A389MF54_9BURK)

HSP 1 Score: 344 bits (883), Expect = 4.090e-115
Identity = 165/301 (54.82%), Postives = 227/301 (75.42%), Query Frame = 1
Query:   55 AQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRAD 954
            A+EFP+KP+R++ PF AGN  +  +R V + FK  TGQP + + K GG+G+IAAQA+MA+  DGYT+L+  + M +INPH F++LPYDP + F P+T  + + +V A H+SV AN + EF+A+AKANPG+ SFASFTAGN SHFAGVILNQ AGIDM HV + GTPPAVQ+L+GGQV  AF+P+ +VK H+++GKVK +A+T  +RS L+P+V TF+E GYP++EIY W    APAG P A++ RLN E   ALK  E + + R++D EP+P++PEEF+   KAD++RW +AVK SGF+ +
Sbjct:   24 AKEFPNKPVRIVVPFAAGNTLDAALRQVAEVFKANTGQPLLVDNKPGGSGIIAAQAVMAAAPDGYTLLMANTSMFTINPHTFSRLPYDPEKTFRPVTNFLGSAMVMAVHSSVPANNVKEFVAWAKANPGQVSFASFTAGNSSHFAGVILNQRAGIDMTHVPFNGTPPAVQNLVGGQVNAAFLPLLAVKPHMDSGKVKVLAVTSPQRSHLMPDVATFREQGYPELEIYIWAAIAAPAGTPDAIIGRLNTEIVKALKSKEIRDKWRSMDFEPLPSTPEEFSQFAKADSKRWAEAVKLSGFKVN 324          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: UPI001FABBAD0 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FABBAD0)

HSP 1 Score: 338 bits (868), Expect = 7.690e-113
Identity = 164/300 (54.67%), Postives = 220/300 (73.33%), Query Frame = 1
Query:   55 AQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            AQ FP KP+R++ PF AGN  +  +R+V + FK+ TGQP + + K GG+G+IAAQ ++++P DGYT+LL  + M +INPH FAKLPYDP + F P+T  + + +V A + SV AN L EFIA+AKA PGK SFASFTAGN SHF+GVILNQ AGIDM+HV + GTPPAVQ+L+GGQV  AF+P+ +VK H+++GKVK IA+T  +RSPL+P V TF+E G+P +EIY W   +APA  P A+V +LN E    LK  E + + R +D E +P++PEEF    +AD+ RW +AVK SGF+A
Sbjct:   24 AQAFPDKPVRIVVPFAAGNTLDTALRLVAEAFKQNTGQPMLIDNKPGGSGIIAAQTVLSAPPDGYTLLLANTSMFTINPHTFAKLPYDPEKSFRPVTNFLGSAMVMAVNASVPANNLKEFIAWAKARPGKVSFASFTAGNSSHFSGVILNQRAGIDMVHVPFNGTPPAVQNLVGGQVDAAFLPLLAVKPHMDSGKVKVIAVTSPQRSPLMPGVGTFREQGFPDLEIYIWAAIVAPAATPEAVVGKLNAELVRILKSAEIKDKWRTMDFETLPSTPEEFTRFAQADSRRWAEAVKISGFKA 323          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: A0A6M5XZB3_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter sp. H242 TaxID=2732511 RepID=A0A6M5XZB3_9BURK)

HSP 1 Score: 334 bits (856), Expect = 5.250e-111
Identity = 169/317 (53.31%), Postives = 226/317 (71.29%), Query Frame = 1
Query:   10 RALFLCTALASAPLGAQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTS-VAANTLPEFIAFAKANP-GKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIAL-TGERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            RAL      A+ P GAQ FP +P+R++ PF AGN  +  +R + ++F++ TGQP + + K GG G IAA A+  +PADGYT+L+  + M +INPH FAKLPYD  + F P+T  +   LV A + + V A TL EF+A+AK  P G  S+ASFTAGN SHFAGVILN+ AG+DM+HV Y G+PPAVQ L+GGQV  AF+P+ +VK HVE+GKVK +A+ T +RSPLLPNVPTF E G+P MEIY W+G  APAG P A + RLN EF  AL  P+ Q + RAID EP+P +P ++ + ++AD++RW +AV+ SGF+A
Sbjct:    8 RALCATLLAAALPAGAQTFPDRPVRVVVPFAAGNTLDASLRQLAEEFRKNTGQPILVDNKPGGGGTIAAMAVAQAPADGYTLLMSNTSMFAINPHTFAKLPYDADKSFKPVTGFLGASLVLAVNAANVPAGTLKEFVAWAKGKPAGGVSYASFTAGNSSHFAGVILNKQAGLDMVHVPYNGSPPAVQSLVGGQVHAAFLPLLAVKPHVESGKVKVLAISTPKRSPLLPNVPTFTEEGFPDMEIYIWSGISAPAGTPDAAIARLNTEFNKALNTPDIQQKWRAIDFEPLPMTPSQYHSFVQADSKRWAEAVRISGFKA 324          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: A0A4V2AE36_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4V2AE36_9BURK)

HSP 1 Score: 334 bits (856), Expect = 5.430e-111
Identity = 170/310 (54.84%), Postives = 224/310 (72.26%), Query Frame = 1
Query:   31 ALASAPLGAQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTS-VAANTLPEFIAFAKANPGKT--SFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIAL-TGERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFR 948
            A A+ P  AQ FP +P+R++ PF AGN  +  +R + ++F++ TGQP + + K GG G IAA A+  +PADGYT+LL  + M +INPH FAKLPYD  + F P+T  +   LV A + S V A+TL EF+A+AKA P  T  S+ASFTAGN SHFAGVILN+ AG++M+HV + GTPPAVQ+LLGGQV  AF+P+ +VK HVE+GKVK +A+ T +RSPLLPNVPTF E GYP MEIY W+G  APAG P A + RLN EF  AL   + Q + RAID EP+P +P ++ A ++AD++RW +AVK SGF+
Sbjct:   15 AAAALPAAAQTFPDRPVRVVVPFAAGNTLDTSLRQLAEEFRKNTGQPLIVDAKPGGGGTIAAMAVAQAPADGYTLLLSNTSMLAINPHTFAKLPYDADKSFKPVTGFLGASLVLAVNASTVPASTLKEFVAWAKAAPAATPVSYASFTAGNSSHFAGVILNKQAGLNMVHVPFNGTPPAVQNLLGGQVHAAFLPLLAVKPHVESGKVKVLAISTPKRSPLLPNVPTFVEEGYPDMEIYIWSGLSAPAGTPDAAIARLNTEFNKALNSADIQQKWRAIDFEPLPMTPSQYQAFVQADSKRWAEAVKLSGFK 324          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: A0A6P2E592_9BURK (Argininosuccinate lyase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2E592_9BURK)

HSP 1 Score: 330 bits (846), Expect = 1.900e-109
Identity = 164/315 (52.06%), Postives = 223/315 (70.79%), Query Frame = 1
Query:   13 ALFLCTALASAPLGAQ-EFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            AL L  +L  A   AQ  FP KP+R++ PF AGN  +  +R V + F + TGQP + + + GG+G+IAAQ +M +PADGYT+LL  + M +INPH F+KLPYDP ++F P+T  +   +V A + +V AN + EF+A+ K+ PGK SFASFTAGN SHFAGVILNQ AGIDMLHV + GTPPAV +L+GG+V  AF+P+ +VK HV+AGKVK +A+T  +RSP LP V TF+E GYP ++IY W   +APA  P A + RLN EF   L+ PE + + +  D EP+P++P+EF    +AD++RW +AVK SGF+A
Sbjct:   13 ALALLGSLPIARAQAQGSFPDKPVRIVVPFAAGNTLDTALRQVAEVFDKNTGQPLLIDNRPGGSGIIAAQNVMGAPADGYTLLLANTSMFTINPHTFSKLPYDPEKNFRPVTNFLGASMVMAVNNNVPANNIKEFVAWTKSRPGKVSFASFTAGNSSHFAGVILNQRAGIDMLHVPFNGTPPAVTNLVGGEVDAAFLPLQAVKPHVDAGKVKVLAVTSPQRSPQLPQVATFREQGYPDLDIYIWAAIVAPAATPDAAIGRLNAEFVKILRTPEIREKWKVFDFEPLPSTPQEFTQFERADSKRWAEAVKISGFKA 327          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: A0A4Q5PRW0_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5PRW0_9BURK)

HSP 1 Score: 330 bits (846), Expect = 2.030e-109
Identity = 165/314 (52.55%), Postives = 220/314 (70.06%), Query Frame = 1
Query:   13 ALFLCTALASAPLGAQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTGE-RSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            A+    +LA+       FP KP+R++ PF AGN  +  +R V + FK  TGQP + + K GG+G+IAAQ +MA+P DGYT+LL  + M +INPH FAKLPYD  + F P+T  + + +V A H+SV AN + EF+ +A+ N GK S+ASFTAGN SHFAGVILNQ AGI+M HV + GTPPAVQ+L+GGQV  AF+P+ +VK HVE+GKVK IA+T   RS L+PNV TF+E GYP ++IY W    APAG P  ++ RLN EF  ALK  E + + + +D E +P++PEEFA    AD++RW +AVK SGF+A
Sbjct:   16 AIPFAASLAARAQAPAAFPDKPVRIVVPFAAGNTLDAALRQVAEVFKVNTGQPLLVDNKPGGSGIIAAQTVMAAPPDGYTLLLTNTSMLTINPHTFAKLPYDAEKSFKPVTNFLGSAMVMAVHSSVPANNVKEFVEWARQNKGKVSYASFTAGNSSHFAGVILNQRAGIEMTHVPFNGTPPAVQNLVGGQVNAAFLPLLAVKPHVESGKVKVIAVTSPVRSALMPNVATFREQGYPDLDIYIWAAIGAPAGTPDPIIARLNTEFVKALKSQEIKDKWKVMDFETLPSTPEEFAKFAAADSKRWAEAVKISGFKA 329          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: UPI0019A8F6E6 (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Proteobacteria TaxID=1224 RepID=UPI0019A8F6E6)

HSP 1 Score: 329 bits (844), Expect = 3.580e-109
Identity = 162/311 (52.09%), Postives = 221/311 (71.06%), Query Frame = 1
Query:   22 LCTALASAPLGAQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            L  A+ +A   AQ FP KP+R++ PF AGN  +  +R V + FK  TGQP + + K GG+G+IAAQ +MA+P DGYT+LL  + M +INPH F+KLPYD  + F P++  +   +V A + +V  + + EF+A+AKANPGK S+ASFTAGN SHFAGVILNQ AGI+M+HV + GTPPAVQ+L+GGQV  AF+P+ +VK H+E+GKVK +A+T  +RS L+P V TF E GYP ++IY W    APAG P A++ RLN EF  A +  E + + + +D EP+P++PEEFA    AD+ RW +AVK SGF+A
Sbjct:   15 LALAVPAARAQAQAFPDKPVRIVVPFAAGNTLDAALRQVAEVFKANTGQPLLVDNKPGGSGIIAAQTVMAAPPDGYTLLLTNTSMLTINPHTFSKLPYDAEKSFRPVSNFLGASMVMAVNANVPVSNVKEFVAWAKANPGKVSYASFTAGNSSHFAGVILNQRAGINMIHVPFNGTPPAVQNLVGGQVDAAFLPLLAVKPHLESGKVKVLAVTSPQRSALMPGVGTFTEQGYPDLDIYIWAAIAAPAGTPDAVIARLNTEFVKAHRSQEIKDKWKLMDFEPLPSTPEEFAKFAAADSRRWAEAVKISGFKA 325          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: UPI001E39AB28 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Xylophilus sp. ASV27 TaxID=2795129 RepID=UPI001E39AB28)

HSP 1 Score: 328 bits (840), Expect = 1.350e-108
Identity = 161/309 (52.10%), Postives = 219/309 (70.87%), Query Frame = 1
Query:   34 LASAPLGA--QEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            L + P GA  Q FP +P+R++ PF  GN  +  +R V + F++  GQP + + K GG+G+IAAQ +MA+P DGYT+LL  + M +INPH FA+LPYDP + F P+T  +   +V A + SV A  + EF+A+ K+ PGK SFASFTAGN SHFAGVILNQ AGIDM+HV + GTPPAV +L+GGQV  AF+P+ +VK  V+AGKVK +A+T  +RSPL+P V TF+E GYP +EIY W   +APA  P A+V RLN EF   L+  + + + RA+D EP+P++P+EF    +AD+ RW +AVK SGF+A
Sbjct:   15 LLALPFGARAQGFPDRPLRIVVPFAPGNTLDTALRQVAEAFQKRVGQPLLIDNKPGGSGIIAAQTVMAAPPDGYTLLLANTSMFTINPHTFARLPYDPDKSFRPVTNFLGASMVMAVNNSVPARNVAEFVAWTKSRPGKVSFASFTAGNSSHFAGVILNQRAGIDMVHVPFNGTPPAVTNLVGGQVDAAFLPLLAVKPQVDAGKVKVLAVTSPQRSPLMPEVATFREQGYPDLEIYIWAAIVAPAATPGAVVDRLNAEFIRILQSADIKEQWRAMDFEPLPSTPDEFTRFARADSRRWAEAVKISGFKA 323          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: A0A3N7ELM6_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax sp. KBW07 TaxID=2153358 RepID=A0A3N7ELM6_9BURK)

HSP 1 Score: 327 bits (837), Expect = 4.250e-108
Identity = 158/297 (53.20%), Postives = 213/297 (71.72%), Query Frame = 1
Query:   64 FPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            FP KP+R++ PF  GN  +  +R V ++F++ TG P + + K GGAG+IAAQ +MA+P DGYT+LL  + M ++NPH FA+LPYDP + F P++  +   +V A + SV AN + EF A+AKA PGK SFASFTAGN SHFAGVILNQ AGIDM+HV + GTPPAV +L+GGQV  AF+P+ +VK  V+AGKVK +A+T   RSPL+P + TF E GYP +EIY W    APAG P A++ RLN EF   LK  + + + RA+D E +P++P+EF    +AD++RW +AVK SGF+A
Sbjct:   30 FPDKPVRIVVPFAPGNTLDTALRQVAEEFRKNTGHPLLIDNKPGGAGIIAAQNVMAAPPDGYTLLLANTSMFTVNPHTFARLPYDPEKSFRPVSNFLGASMVMAVNNSVPANNVKEFAAWAKARPGKVSFASFTAGNSSHFAGVILNQRAGIDMVHVPFNGTPPAVTNLVGGQVDAAFLPLLAVKPQVDAGKVKVLAVTSPRRSPLMPQIATFAEQGYPDLEIYIWAAIAAPAGTPDAVIGRLNTEFVKILKSADLKEKWRAMDFETLPSTPQEFTRFAQADSKRWAEAVKISGFKA 326          
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Match: UPI001C595264 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Variovorax boronicumulans TaxID=436515 RepID=UPI001C595264)

HSP 1 Score: 325 bits (834), Expect = 1.380e-107
Identity = 161/306 (52.61%), Postives = 213/306 (69.61%), Query Frame = 1
Query:   37 ASAPLGAQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFKETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFAKLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSFASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVPITSVKGHVEAGKVKAIALTG-ERSPLLPNVPTFKELGYPKMEIYAWTGFLAPAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKADTERWRDAVKASGFRA 951
            A+A      FP KP+R++ PF  GN  +  +R V + F   TGQP + + K GG+G+IAAQ  M +PADGYT+LL  + M +INPH F+KLPYD  + F P+T  +   +V A + SV AN L EF+A+ KA+PGK SFASFTAGN SHFAGVILNQ AGIDM+HV + GTPPAV +L+GGQV  AF+P+ +VK H+++GKVK +A+T   RSPL+P V TF+E GYP ++IY W   +APA  P A+V RLN EF  AL   E + + R +D E +P++PEEF A  + D+ RW +AVK SGF+A
Sbjct:   25 AAAAFAEARFPDKPVRIVVPFAPGNTLDAALRQVAEVFLRNTGQPLLVDNKPGGSGIIAAQNAMNAPADGYTLLLGNTSMLTINPHTFSKLPYDAQKSFRPVTNFLGAAMVMAVNASVPANNLQEFVAWTKAHPGKVSFASFTAGNSSHFAGVILNQRAGIDMMHVPFNGTPPAVTNLVGGQVTAAFLPLLAVKPHMDSGKVKVLAVTSPRRSPLMPGVATFREQGYPDLDIYIWASVMAPAATPDAVVARLNTEFVKALNTQEIKDKWREMDFETLPSTPEEFTAFARTDSRRWAEAVKISGFKA 330          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6377.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A389MF54_9BURK4.090e-11554.82MFS transporter n=1 Tax=Polaromonas sp. TaxID=1869... [more]
UPI001FABBAD07.690e-11354.67tripartite tricarboxylate transporter substrate bi... [more]
A0A6M5XZB3_9BURK5.250e-11153.31Tripartite tricarboxylate transporter substrate bi... [more]
A0A4V2AE36_9BURK5.430e-11154.84Tripartite tricarboxylate transporter substrate bi... [more]
A0A6P2E592_9BURK1.900e-10952.06Argininosuccinate lyase n=2 Tax=unclassified Vario... [more]
A0A4Q5PRW0_9BURK2.030e-10952.55Tripartite tricarboxylate transporter substrate bi... [more]
UPI0019A8F6E63.580e-10952.09Tripartite tricarboxylate transporter substrate bi... [more]
UPI001E39AB281.350e-10852.10tripartite tricarboxylate transporter substrate bi... [more]
A0A3N7ELM6_9BURK4.250e-10853.20Tripartite tricarboxylate transporter substrate bi... [more]
UPI001C5952641.380e-10752.61tripartite tricarboxylate transporter substrate bi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6377contigP-wetherbeei_contig6377:75..1031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog399795.CtesDRAFT_PD1137
PFAMsTctC
Model size957
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.01e-96
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1MU58@1224|Proteobacteria
DescriptionProtein conserved in bacteria
Cds size954
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186908.7947602-CDS-P-wetherbeei_contig6377:74..10281683186908.7947602-CDS-P-wetherbeei_contig6377:74..1028Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6377 75..1028 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186908.8062465-UTR-P-wetherbeei_contig6377:1028..10311683186908.8062465-UTR-P-wetherbeei_contig6377:1028..1031Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6377 1029..1031 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6377.1.1prot_P-wetherbeei_contig6377.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6377 75..1028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6377.1.1

>prot_P-wetherbeei_contig6377.1.1 ID=prot_P-wetherbeei_contig6377.1.1|Name=mRNA_P-wetherbeei_contig6377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=318bp
MARALFLCTALASAPLGAQEFPSKPIRMISPFPAGNVNEIVMRIVGDKFK
ETTGQPFVYEYKAGGAGVIAAQALMASPADGYTILLCTSGMTSINPHAFA
KLPYDPVRDFTPITAAIRTQLVFAAHTSVAANTLPEFIAFAKANPGKTSF
ASFTAGNPSHFAGVILNQLAGIDMLHVAYKGTPPAVQDLLGGQVMTAFVP
ITSVKGHVEAGKVKAIALTGERSPLLPNVPTFKELGYPKMEIYAWTGFLA
PAGMPAALVQRLNREFTAALKQPEAQARLRAIDLEPIPNSPEEFAAMMKA
DTERWRDAVKASGFRAD*
back to top

mRNA from alignment at P-wetherbeei_contig6377:75..1031-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6377.1.1 ID=mRNA_P-wetherbeei_contig6377.1.1|Name=mRNA_P-wetherbeei_contig6377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=957bp|location=Sequence derived from alignment at P-wetherbeei_contig6377:75..1031- (Phaeothamnion wetherbeei SAG_119_79)
CTGATGGCCCGAGCGCTGTTTCTGTGCACGGCTTTGGCCAGCGCACCGCT CGGCGCGCAGGAATTCCCGTCCAAGCCGATCCGGATGATCTCGCCGTTCC CGGCGGGCAACGTCAACGAGATCGTCATGCGCATCGTCGGCGACAAATTC AAGGAAACGACCGGGCAGCCGTTCGTGTACGAATACAAGGCGGGCGGTGC GGGTGTGATCGCCGCGCAGGCGCTGATGGCCTCGCCTGCGGACGGCTACA CGATCCTGCTTTGCACGTCGGGCATGACCTCGATCAACCCGCATGCCTTC GCCAAGCTCCCCTACGACCCGGTCAGGGATTTCACGCCGATCACGGCGGC GATCCGCACCCAGCTGGTGTTCGCGGCCCACACTTCGGTGGCGGCCAATA CACTGCCCGAGTTCATCGCCTTCGCCAAGGCGAACCCCGGAAAGACGAGC TTCGCTTCGTTTACGGCGGGCAACCCGTCCCATTTCGCGGGCGTAATCCT GAACCAGCTCGCGGGCATCGACATGCTGCACGTGGCCTACAAGGGCACGC CGCCCGCGGTGCAGGACCTGCTCGGCGGGCAGGTGATGACCGCCTTCGTG CCGATCACCTCCGTCAAAGGGCACGTCGAGGCCGGCAAGGTGAAGGCCAT TGCGCTGACCGGCGAGCGCTCGCCACTGCTGCCGAACGTACCGACCTTCA AGGAGCTTGGCTATCCGAAGATGGAGATCTACGCGTGGACCGGTTTCCTC GCACCCGCGGGCATGCCCGCGGCGCTGGTTCAGAGGCTGAACCGCGAATT CACCGCCGCGCTGAAGCAGCCCGAGGCGCAGGCGAGGCTGCGCGCGATCG ACCTCGAACCCATCCCGAATTCGCCCGAGGAATTCGCCGCGATGATGAAG GCCGACACCGAGCGCTGGCGCGACGCCGTGAAGGCGTCCGGATTCCGCGC CGACTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6377:75..1031-

>mRNA_P-wetherbeei_contig6377.1.1 ID=mRNA_P-wetherbeei_contig6377.1.1|Name=mRNA_P-wetherbeei_contig6377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=954bp|location=Sequence derived from alignment at P-wetherbeei_contig6377:75..1031- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCGAGCGCTGTTTCTGTGCACGGCTTTGGCCAGCGCACCGCTCGG
CGCGCAGGAATTCCCGTCCAAGCCGATCCGGATGATCTCGCCGTTCCCGG
CGGGCAACGTCAACGAGATCGTCATGCGCATCGTCGGCGACAAATTCAAG
GAAACGACCGGGCAGCCGTTCGTGTACGAATACAAGGCGGGCGGTGCGGG
TGTGATCGCCGCGCAGGCGCTGATGGCCTCGCCTGCGGACGGCTACACGA
TCCTGCTTTGCACGTCGGGCATGACCTCGATCAACCCGCATGCCTTCGCC
AAGCTCCCCTACGACCCGGTCAGGGATTTCACGCCGATCACGGCGGCGAT
CCGCACCCAGCTGGTGTTCGCGGCCCACACTTCGGTGGCGGCCAATACAC
TGCCCGAGTTCATCGCCTTCGCCAAGGCGAACCCCGGAAAGACGAGCTTC
GCTTCGTTTACGGCGGGCAACCCGTCCCATTTCGCGGGCGTAATCCTGAA
CCAGCTCGCGGGCATCGACATGCTGCACGTGGCCTACAAGGGCACGCCGC
CCGCGGTGCAGGACCTGCTCGGCGGGCAGGTGATGACCGCCTTCGTGCCG
ATCACCTCCGTCAAAGGGCACGTCGAGGCCGGCAAGGTGAAGGCCATTGC
GCTGACCGGCGAGCGCTCGCCACTGCTGCCGAACGTACCGACCTTCAAGG
AGCTTGGCTATCCGAAGATGGAGATCTACGCGTGGACCGGTTTCCTCGCA
CCCGCGGGCATGCCCGCGGCGCTGGTTCAGAGGCTGAACCGCGAATTCAC
CGCCGCGCTGAAGCAGCCCGAGGCGCAGGCGAGGCTGCGCGCGATCGACC
TCGAACCCATCCCGAATTCGCCCGAGGAATTCGCCGCGATGATGAAGGCC
GACACCGAGCGCTGGCGCGACGCCGTGAAGGCGTCCGGATTCCGCGCCGA
CTGA
back to top