mRNA_P-wetherbeei_contig6370.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A835YQX6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX6_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.450e-61 Identity = 93/134 (69.40%), Postives = 108/134 (80.60%), Query Frame = 3
Query: 249 DDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFADGAKSKWWMLFSKRKFMGKELR 650
+DIIDE LF+FRAN+MFRNF V ADR L+YLTFY QQCLREMEKTD+KQ A RAL LA + FA PGE WQLGT+FP+P+ RDEAE ++Y KQCREE+G RL RVFADG KSKWW FSKR+FMGKE++
Sbjct: 41 EDIIDETLFYFRANIMFRNFAVESNADRTLIYLTFYAQQCLREMEKTDDKQAANRALNLLANKTFAAPGEAGWQLGTIFPAPRVRDEAEMFKAYFKQCREELGTRLIERVFADGTKSKWWQFFSKRRFMGKEMQ 174
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A7S2RMH4_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMH4_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.820e-49 Identity = 75/141 (53.19%), Postives = 105/141 (74.47%), Query Frame = 3
Query: 231 PCTAAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFA-DGAKSKWWMLFSKRKFMGKELR 650
P DD+IDE + FFRANV+FRNF+++ ADR L+YLT Y+QQCL+E E+ E+AL LA+R+FA+PG+ +W +G+++P+P+S E E C++Y KQCREE+G R + +F DG+K+KWW FSKRKFMGKEL+
Sbjct: 44 PMPEDEDDVIDETIKFFRANVLFRNFEIKNSADRTLIYLTLYLQQCLKECERAKTVGEGEKALQQLALRQFAIPGDTNWAMGSMYPAPKSTAEGEGCKAYFKQCREELGRRFSQVLFLPDGSKNKWWQAFSKRKFMGKELK 184
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A7S1U2P7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2P7_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.500e-43 Identity = 69/133 (51.88%), Postives = 95/133 (71.43%), Query Frame = 3
Query: 249 DDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFADGAKSKWWMLFSKRKFMGKEL 647
+DI+DEAL++FRANV+FRN++++ ADR L+Y+T Y+ LRE ++ A R L AIR FAVPGE W LGTLFP P R+E+E ++Y KQ REE+ RL A+++ D K+KWW +FSKRKFMG ++
Sbjct: 81 EDILDEALYYFRANVLFRNYEIKSAADRTLIYMTLYVTMILRECDRIGSATDASRQLQLSAIRNFAVPGEAGWALGTLFPPPADRNESETFKAYFKQAREEMSERLIAKLYTDAGKNKWWAMFSKRKFMGIDM 213
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A7S2FM28_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM28_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.810e-43 Identity = 71/140 (50.71%), Postives = 100/140 (71.43%), Query Frame = 3
Query: 231 PCTAAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFA-DGAKSKWWMLFSKRKFMGKEL 647
PC A +DIIDE L FFRAN+ FRNF+V+ GADR L+YL+ Y+ Q L+E+++ ++K A + L+ L I+ F VPGE W LG +FP+P S +A+ R+Y KQC+ E+G R+ ++ DG K+KWW +F+KRKFMGK L
Sbjct: 46 PCEADDEDIIDETLKFFRANIFFRNFEVKGGADRTLLYLSLYVAQVLKELDRQNDKTQAAKDLHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 185
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A8J6CIQ6_DIALT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CIQ6_DIALT) HSP 1 Score: 154 bits (390), Expect = 5.600e-43 Identity = 73/140 (52.14%), Postives = 96/140 (68.57%), Query Frame = 3
Query: 237 TAAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFADG---AKSKWWMLFSKRKFMGKEL 647
TA +DIIDE LFFF+ANV+FRNF+VR ADR+LVYLT Y+ +CL+ +E K A RAL N+A+ FA+PG+ + LG FP+P++R EA+ RSY +Q REE G R+ + + DG SKWW SKR+FM K L
Sbjct: 36 TAGKEDIIDEVLFFFKANVLFRNFEVRGSADRLLVYLTLYVTECLKRVEAAPSKADAVRALNNMALESFAIPGDASFTLGPYFPTPENRQEADFVRSYFRQLREETGRRVVEKCYIDGETRVPSKWWTSLSKRRFMNKAL 175
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A7S4BNT7_CHRCT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNT7_CHRCT) HSP 1 Score: 150 bits (379), Expect = 2.260e-41 Identity = 69/137 (50.36%), Postives = 101/137 (73.72%), Query Frame = 3
Query: 240 AAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFA-DGAKSKWWMLFSKRKFMGKEL 647
A +DD+IDE LFFF+ANV+FR+F+++ ADR+L+YLT YI QCL+++E ++ A +AL ++A F +PG+ + LGT FPSPQ+ EA+ R+YLKQ REE G RL +V+ DG SK+W++F+KR+FM K +
Sbjct: 36 AESDDVIDETLFFFKANVLFRHFELKGNADRVLIYLTLYITQCLKKLEGLPDRVSALKALTSMAHESFLIPGDAGFALGTFFPSPQTSQEADLTRAYLKQLREETGRRLLDKVYGEDGQPSKFWLVFAKRRFMNKSV 172
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A7S2FM82_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM82_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.850e-41 Identity = 68/134 (50.75%), Postives = 97/134 (72.39%), Query Frame = 3
Query: 249 DDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFA-DGAKSKWWMLFSKRKFMGKEL 647
+DIIDE L FFRAN+ FRNF+V+ GADR L+YL+ Y+ Q L+E+++ ++K A + L+ L I+ F VPGE W LG +FP+P S +A+ R+Y KQC+ E+G R+ ++ DG K+KWW +F+KRKFMGK L
Sbjct: 24 EDIIDETLKFFRANIFFRNFEVKGGADRTLLYLSLYVAQVLKELDRQNDKTQAAKDLHALEIKSFPVPGEQGWTLGGMFPNPTSPADADAFRAYFKQCKVEIGRRVLEILYLPDGTKNKWWNMFAKRKFMGKTL 157
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: UPI001D07FB71 (actin-related protein 2/3 complex subunit 3-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D07FB71) HSP 1 Score: 149 bits (376), Expect = 8.560e-41 Identity = 69/139 (49.64%), Postives = 97/139 (69.78%), Query Frame = 3
Query: 237 TAAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFA--DGAKSKWWMLFSKRKFMGKEL 647
TAA DIIDEAL++F+ANV FR ++V+ ADR+L+Y+T YI +CL+ ++K KQ +Y LAI KF++PGEP + L ++P P S +A+ R YL+Q R+E G R+ +VFA DG SKWW+ F+K+KFM K L
Sbjct: 39 TAADMDIIDEALYYFKANVFFRTYEVKNEADRVLIYVTLYITECLKRLQKCATKQQGINEMYTLAISKFSIPGEPGFPLNAVYPKPTSPTDADLLRQYLQQLRQETGVRVVEKVFATEDGKPSKWWLCFAKKKFMDKSL 177
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: UPI0005AC7586 (actin-related protein 2/3 complex subunit 3 n=2 Tax=Opiinae TaxID=68883 RepID=UPI0005AC7586) HSP 1 Score: 148 bits (373), Expect = 2.130e-40 Identity = 66/141 (46.81%), Postives = 99/141 (70.21%), Query Frame = 3
Query: 231 PCTAAAD-DIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFADGAK-SKWWMLFSKRKFMGKEL 647
PC+ + DIIDEAL+FFRANV FR ++++ ADR+L+Y+T YI +CL++++K + A +Y+LAI KF +PG+P + L +++ P S EA++ R YL+Q R+E RL RV++D K SKWW+ F+K+KFM K L
Sbjct: 33 PCSPGTEQDIIDEALYFFRANVFFRTYEIKSEADRVLIYITLYITECLKKLQKCANQNQALNEMYSLAISKFDIPGDPGFPLNSVYAKPSSTTEADQMRQYLQQIRQETAARLVERVYSDNGKPSKWWLCFAKKKFMDKTL 173
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Match: A0A7S3AL63_9EUKA (Actin-related protein 2/3 complex subunit 3 n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AL63_9EUKA) HSP 1 Score: 147 bits (371), Expect = 3.040e-40 Identity = 69/141 (48.94%), Postives = 97/141 (68.79%), Query Frame = 3
Query: 231 PCTAAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIQQCLREMEKTDEKQLAERALYNLAIRKFAVPGEPDWQLGTLFPSPQSRDEAEKCRSYLKQCREEVGGRLAARVFA--DGAKSKWWMLFSKRKFMGKEL 647
PC DD++DE L FF+ANV+F+ F+V+ ADR+L+YLT YI QCL ++ K RAL ++A F +PG+ + LG+ FP+P S EA+ CRSYLKQ REE+G R+ ++V+ DG SK+W++F+KRKFM K L
Sbjct: 27 PCPEGEDDVLDEILGFFKANVLFKQFEVKGAADRVLIYLTLYITQCLSKLNTVASKADGVRALTSMAHETFHIPGDGGFPLGSFFPAPASAREADLCRSYLKQLREEMGRRVLSKVYQSPDGVASKFWLVFAKRKFMNKAL 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6370.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6370.1.2 >prot_P-wetherbeei_contig6370.1.2 ID=prot_P-wetherbeei_contig6370.1.2|Name=mRNA_P-wetherbeei_contig6370.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MDKLSFSPCTAAADDIIDEALFFFRANVMFRNFDVRCGADRILVYLTFYIback to top mRNA from alignment at P-wetherbeei_contig6370:2..1465- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6370.1.2 ID=mRNA_P-wetherbeei_contig6370.1.2|Name=mRNA_P-wetherbeei_contig6370.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1464bp|location=Sequence derived from alignment at P-wetherbeei_contig6370:2..1465- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6370:2..1465- >mRNA_P-wetherbeei_contig6370.1.2 ID=mRNA_P-wetherbeei_contig6370.1.2|Name=mRNA_P-wetherbeei_contig6370.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig6370:2..1465- (Phaeothamnion wetherbeei SAG_119_79)back to top |