mRNA_P-wetherbeei_contig6367.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6367.1.1 vs. uniprot
Match: A0A835ZJ00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ00_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.970e-23 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 1 LIGKAKAVVDADMALRDASLLADDFKFVRAFQAPLDKAAYLCEYSSYGLREAFPDLFWNAHDFRMERYDSNRVVATVRFQGTHRGTLKYRK 273
L+ KAKAVV+++M L + SLL+DDF ++ F+ L KA YL EY + GL A PDL WNAHDFR++R+++ RV TVR GTHRG L Y K
Sbjct: 74 LVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGK 164
BLAST of mRNA_P-wetherbeei_contig6367.1.1 vs. uniprot
Match: D7FSC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSC2_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 5.970e-17 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 1 LIGKAKAVVDADMALRDASLLADDFKFVRAFQAPLDKAAYLCE----YSSYGLREAFPDLFWNAHDFRMERYDSNRVVATVRFQGTHRGTLKY 267
LI KAK +V+ADM ++ A +L DF+F+ F + +A YL E Y++ LR A PDLFWN++D+R+++Y+ NRV AT R GTH G L +
Sbjct: 22 LIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYAT--LRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVF 112
BLAST of mRNA_P-wetherbeei_contig6367.1.1 vs. uniprot
Match: A0A7S2XK70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XK70_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.190e-9 Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 1
Query: 1 LIGKAKAVVDADMALRDASLLADDFKFVRAFQAPLDKAAYLCEYSSYGLREAFPDLFWNAHDFRMERYDSNRVVATVRFQGTHRGTL 261
++ AK V+ AD D LLA F F PL K A++ +SS+ L++AFPDL + +FR++ YD NRV R GT G L
Sbjct: 283 MVQLAKGVIAADNGAADPDLLAPSFTFCGPIVGPLPKDAFVEAFSSFKLKDAFPDLGQDLSNFRVDPYDPNRVWVDARGSGTRTGVL 369
BLAST of mRNA_P-wetherbeei_contig6367.1.1 vs. uniprot
Match: I0YKW7_COCSC (Amidase signature enzyme n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YKW7_COCSC) HSP 1 Score: 54.7 bits (130), Expect = 1.580e-6 Identity = 31/89 (34.83%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 LIGKAKAVVDADMALRDASLLADDFKFVRAFQAPLDKAAYLCEYSSYGLREAFPDLFWNAHDFRMERYDSNRVVATVRFQGTHRGTLKY 267
LI A+ V + + D LLAD+F+F + L K ++ S + L++AFP++ + +D+R+++Y+ NRV TVR TH G L++
Sbjct: 25 LIALAQKVFATNSGVEDPDLLADNFRFEFPVVS-LAKKDFVKAVSGFNLKDAFPNMESHPYDWRVDKYEPNRVWWTVRNTATHTGPLRF 112
BLAST of mRNA_P-wetherbeei_contig6367.1.1 vs. uniprot
Match: A0A8J9WRP9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRP9_9CHLO) HSP 1 Score: 53.5 bits (127), Expect = 2.320e-6 Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 1 LIGKAKAVVDADMALRDASLLADDFKFVRAFQAPLDKAA-----YLCEY----SSYGLREAFPDLFWNAHDFRMERYDSNRVVATVRFQGTHRGTLKY 267
LI A+ V ++ + LLADDF+F + KA+ +C++ S + L++AFP++ + +D+R+++Y+ NRV TVR TH G L +
Sbjct: 25 LIALAQKVFKSNSGVEQPELLADDFRFEFPVVSLAKKASCCLSSIICDFVKAVSGFNLKQAFPNMESHPYDWRVDKYEPNRVWFTVRNTATHAGPLTF 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6367.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6367.1.1 >prot_P-wetherbeei_contig6367.1.1 ID=prot_P-wetherbeei_contig6367.1.1|Name=mRNA_P-wetherbeei_contig6367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp LIGKAKAVVDADMALRDASLLADDFKFVRAFQAPLDKAAYLCEYSSYGLRback to top mRNA from alignment at P-wetherbeei_contig6367:355..645- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6367.1.1 ID=mRNA_P-wetherbeei_contig6367.1.1|Name=mRNA_P-wetherbeei_contig6367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig6367:355..645- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6367:355..645- >mRNA_P-wetherbeei_contig6367.1.1 ID=mRNA_P-wetherbeei_contig6367.1.1|Name=mRNA_P-wetherbeei_contig6367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig6367:355..645- (Phaeothamnion wetherbeei SAG_119_79)back to top |