mRNA_P-wetherbeei_contig6357.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK) HSP 1 Score: 127 bits (318), Expect = 5.350e-29 Identity = 84/270 (31.11%), Postives = 125/270 (46.30%), Query Frame = 3
Query: 78 EEEGEQAEEPTATAGRNFTLQQLHLRDGIQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTW-HCPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMAL--EPAGGGGVAELTPDEAASTSEWERSFRETAMYPVVGI 878
+++ ++ EEP RNFT +QL DG + D P+ V+L+G VFDVS+A +G Y++ GHDA+ NLAK+SF+E DL+ + + E L W + + P VGR+V P EL++ G P GYA API +++ G V+DVSFGG Y G +H AGKD + ALA+M+ E + +L+ E +WE +F+ YP++G
Sbjct: 52 KKQAQEEEEPEPP--RNFTFEQLKKYDGSEEDE----PIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAKMSFEEDDLNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPPKPR-------------------------------------KISREELQEMRGKQTCPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNSTELKDLSEKELKVLDDWENTFKNRKKYPIIGF 278
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A482STY5_9ARCH (Cytochrome b5 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STY5_9ARCH) HSP 1 Score: 125 bits (314), Expect = 1.070e-27 Identity = 86/270 (31.85%), Postives = 122/270 (45.19%), Query Frame = 3
Query: 81 EEGEQAEEPTATAGRNFTLQQLHLRDGIQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTW-HCPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALEPAG--GGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
+E E EP R+FT+QQL + +G P+ V L G+V+DV+ A +GP Y + G D+S +AKLSF+E DL + E L W K + + P VGRL P +EL + G+G P G AP+ V +NGTVFDVS+GG ++Y P + AGKDI+ ALA+M+ + +++L E ++WE+ RET YPVVG L
Sbjct: 139 QEAESQPEPEPIVLRDFTIQQLR-----EFNGEDDKPIYVGLVGDVYDVTQARNYYGPGATYHLFAGRDSSRAMAKLSFEEVDLSNPDISRINPFEKDALDDWVHKFKYYKQYPIVGRLSTPPTDLTL-------------------------------------TRSELAQFTGTGSIPEGKVHAPVYVVLNGTVFDVSYGGYEMYGPEGPYSNFAGKDISRALAKMSFDKNDLENTDMSDLDERELKILADWEKKLRETKKYPVVGTL 366
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.120e-26 Identity = 85/256 (33.20%), Postives = 116/256 (45.31%), Query Frame = 3
Query: 123 RNFTLQQLHLRDGIQRDGRPP--LPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTWH-CPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMAL--EPAGGGGVAELTPDEAASTSEWERSFRETAMYPVVG 875
RNFTL+QL G+ G +P+ V+L+GEVFDVS A +G Y I GHDAS++LA+ S D DL+ M W+ L E L W + R + P VGR+V P +L G GP P G A AP+LVA+ G VFDVS+GG Y G ++ G+D + ALA+M+ E +A+L+ E ++W F + Y VVG
Sbjct: 61 RNFTLEQLKAFTGVNAKGEDDEDVPIYVALRGEVFDVSQARHAYGKEGNYHIFAGHDASVSLARHSLDASDLNKMTWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLP----------------------------------DPLPVYTKEQLAAGTGEGPIPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNPSIADLSLAEVGVMNDWAARFEKKG-YRVVG 281
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: D7FY31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY31_ECTSI) HSP 1 Score: 114 bits (285), Expect = 1.170e-24 Identity = 80/256 (31.25%), Postives = 118/256 (46.09%), Query Frame = 3
Query: 123 RNFTLQQLHLRDGIQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTW-HCPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALEPA--GGGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
RNFT++QLH DG RD P V+L+GEVFDVS+ + Y + GHDAS +LA S D DL+ +W L E L W +K + + P VG++V PA ELR DG+ P GYA PI V + G V+D+S+GG ++Y PG+ ++ AG+D + ALA+M+ P ++ L+ ++ +W + YPV+G +
Sbjct: 56 RNFTIEQLHEFDG--RD--EATPAYVALRGEVFDVSSKPEHYKVGGGYHLFAGHDASYSLATGSLDPADLEK-SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQP------------------------------------REFSLEELRPFDGTSDIPEGYAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSKEDMTVLQDWASKMEKK--YPVIGTI 268
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A7S2G6E6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6E6_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.410e-24 Identity = 82/259 (31.66%), Postives = 114/259 (44.02%), Query Frame = 3
Query: 123 RNFTLQQLHLRDG---IQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTWHC-PSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALEP--AGGGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
RNF+ QL DG + + + +KGEV+DVS+AA +G PY++ G DAS LA LSF+E L E +L W +K + C P VGRLV PA EL G+ P G+ P+ V +N V+DVSFGG D+Y G +H AGKD++ ALA+M+ +P V++L+ E +W + F +YPVVG L
Sbjct: 55 RNFSAAQLREYDGNDDADKFDSKAGKIYICIKGEVYDVSSAAEFYGADGPYALFAGRDASRCLATLSFEEEALANPDISTCSSLEIDQLEDWVNKFKYIKCYPVVGRLV-TPARR------------------------------------GPITVEELANFKGTQEVPEGHCDPPLYVGVNKKVYDVSFGGFDMYKEGATYHLFAGKDVSRALAKMSFKPEDVNSREVSDLSDQEQKIMEDWAQKFEHKKLYPVVGDL 276
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A836CD55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD55_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.420e-23 Identity = 78/237 (32.91%), Postives = 105/237 (44.30%), Query Frame = 3
Query: 183 PLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTWHCPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDG-SGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALEPAGGGG---VAELTPDEAASTSEWERSFRETAMYPVVGIL 881
P LC+ ++G VFDVS+ G++G Y +T HDAS LA S D DLD L + R LS W + L+ C +GRLV P ELR +G P GYA+ P+ +A NG VFDVSFGG D+Y G + L G D + LA+M++ A G +A L+ E + + WE R+ YPVVG +
Sbjct: 6 PTLLCLCMQGYVFDVSSDPGVYGEGGRYHFLTRHDASYCLATGSCDAADLDREDLSCLTPQQQRTLSGWVEMLQAKGCAVLGRLVRTPPPK-------------------------------------PFQRHELRHFNGRQSQVPAGYAIPPMYMACNGVVFDVSFGGLDMYDVGCPYACLVGNDASCVLARMSMTQADIDGTLDMANLSEKEQRNLTAWEAKLRQKG-YPVVGYM 204
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A7S2R2U9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2U9_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.150e-22 Identity = 96/274 (35.04%), Postives = 130/274 (47.45%), Query Frame = 3
Query: 123 RNFTLQQLHLRDG-----------IQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDA--LPEDEARELSCWADKLRTWHC-PSVGRLVG-----DPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALEPA--GGGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
RNFT +QL DG + ++ P+ +SLKG VFDVS A +GP PY G + + LAK + + L A D+ L E E +L+ W K + C P +GRLV DP + XXXXXXXXXXXX G P GY PI + ++GTVFDVSFGG + Y G +H AGKD++ ALA+M+L+ A V +L E + +W+ SF++ YP+VG L
Sbjct: 59 RNFTSEQLAYYDGTVDETIPKRKVLVKESDNKKPVYLSLKGIVFDVSEATNFYGPGGPYESFAGRECGMALAKRNMYDASLLDEAVDSSLLNEKERTQLAEWIHKFQKVRCYPIMGRLVSSSQLPDPDRLLT---------------KDDLLANDGTIHXXXXXXXXXXXXXXXXXXXGDVVIPEGYGTVPIYLGVDGTVFDVSFGGLEYYGKGCPYHPFAGKDVSRALAKMSLDVAEIDNCAVHDLNEKECKTLKDWKTSFQDKRKYPIVGQL 317
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A7S1XXM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXM8_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.100e-22 Identity = 84/268 (31.34%), Postives = 122/268 (45.52%), Query Frame = 3
Query: 90 EQAEEPTATAGRNFTLQQLHLRDGIQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTWH-CPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGG-QDLYSPGRRFHKLAGKDITAALAQMAL--EPAGGGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
E EEP RNFTL+QL G + +++KGEVFDVSA A L+GP Y +TG +AS LAK + + DL++ D L E +L W +K + + P GR+V P + A+LR + G+ P GYA AP+ +A+ ++DVSFG ++Y PG + KLAG+D AL +M+L E +++ T D+ +W F + YP VG L
Sbjct: 49 EPKEEPPKP--RNFTLEQLKAYRSEDDGG-----IFIAIKGEVFDVSAKAELYGPGGNYEALTGREASRALAKFALEGPDLESTKIDDLNYGEREQLDGWYEKFKHVNEYPVRGRVVTPPGEKL-------------------------------------FTEAQLRAYTGTQAVPEGYAAAPLYIAVRRRIYDVSFGNLTEMYLPGGPYAKLAGRDGNRALGKMSLKEEDMFSRDISDFTDDQNQILDDWAAKFAQR--YPCVGTL 270
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A7S1ZYW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYW5_TRICV) HSP 1 Score: 89.4 bits (220), Expect = 1.990e-17 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 582 ELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALEPAG--GGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
EL K+DG+G TP GYA API +A G VFDVSFGG Y G +++ AGKD + ALA+M+ +P ++LT E ++W ++F E +YP +G +
Sbjct: 32 ELEKNDGTGDTPEGYATAPIYLAAQGKVFDVSFGGVTFYGEGGSYNRFAGKDASRALAKMSFDPEDTINTDTSDLTEKEKKVLNDWVKTFEEKKLYPCIGRM 133
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Match: A0A7S2V6T0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6T0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 3.830e-15 Identity = 73/255 (28.63%), Postives = 103/255 (40.39%), Query Frame = 3
Query: 123 RNFTLQQLHLRDGIQRDGRPPLPLCVSLKGEVFDVSAAAGLFGPSKPYSIVTGHDASINLAKLSFDERDLDTMAWDALPEDEARELSCWADKLRTWHCPSVGRLVGDPAAAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELRKHDGSGPTPPGYAMAPILVAINGTVFDVSFGGQDLYSPGRRFHKLAGKDITAALAQMALE--PAGGGGVAELTPDEAASTSEWERSFRETAMYPVVGIL 881
RNF+ QL DG + + ++ +G+V DVS A +FGP Y G D S LD+ + DA A+ L+ + K P +G LV EL + +G P GY+ PIL+A+ GTVFD+SFGG D Y PGR +H +AG+D + ALA+M+L+ +LT E W + F YP+ G L
Sbjct: 24 RNFSADQLKEYDGESNE-----KVYLAFRGKVLDVSGKANVFGPGGAYHHFAGKDFS------QLHNEGLDSSSADANLASVAKVLTA-SSKF-----PVLGNLV-------------------------------------QINPDKEYTLEELGRANGRQEIPEGYSSPPILIAVKGTVFDMSFGGNDFYGPGRGYHVMAGRDASRALAKMSLDVKDVESPNTLDLTESEKDVLENWYKKF--CGKYPICGKL 222 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6357.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6357.1.2 >prot_P-wetherbeei_contig6357.1.2 ID=prot_P-wetherbeei_contig6357.1.2|Name=mRNA_P-wetherbeei_contig6357.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp MLALGFVLVWCFGHTASPSTKAVNFEEEGEQAEEPTATAGRNFTLQQLHLback to top mRNA from alignment at P-wetherbeei_contig6357:224..2617+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6357.1.2 ID=mRNA_P-wetherbeei_contig6357.1.2|Name=mRNA_P-wetherbeei_contig6357.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2394bp|location=Sequence derived from alignment at P-wetherbeei_contig6357:224..2617+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6357:224..2617+ >mRNA_P-wetherbeei_contig6357.1.2 ID=mRNA_P-wetherbeei_contig6357.1.2|Name=mRNA_P-wetherbeei_contig6357.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig6357:224..2617+ (Phaeothamnion wetherbeei SAG_119_79)back to top |