mRNA_P-wetherbeei_contig6343.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A836CG36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG36_9STRA) HSP 1 Score: 212 bits (539), Expect = 5.000e-64 Identity = 111/209 (53.11%), Postives = 133/209 (63.64%), Query Frame = 1
Query: 142 PTRHSFTYNIFYCFIDLDELRRLFPARLWPLASRRRW-ALVRWDGGDHLKDRPEVAGG---SMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIV---SNTPWMEMHCYVLAPGSPGV-----EIAAKPLPETHRLQCHRRQATETTAAA--------------FRKDFHVSPFMGMDYTYDWGFSVP 690
P+ HSFTY IFY F+DLDEL +FP LWPLA+R AL R+D DHLKD+P+ AG S+++RVR V +GERP GPVRLLTHL+YLGYCFNPVSFYYCY+A G+R+QA+V SNTPW+EMHCY LAPG GV E + +T A T A F K FHVSPFM M++TYDW F+ P
Sbjct: 4 PSEHSFTYPIFYAFLDLDELPLVFPWYLWPLATRFNIPALARFDAADHLKDQPQQAGDTERSLADRVRDFVGARSGERPEGPVRLLTHLTYLGYCFNPVSFYYCYDADGERLQAVVGEVSNTPWLEMHCYALAPGVEGVHVTTGETVSSSSEDTAHTSASNTAANSTVAEGQDAAGGAADTVRYRFAKAFHVSPFMDMEHTYDWSFTAP 212
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: D8LIW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIW5_ECTSI) HSP 1 Score: 208 bits (530), Expect = 1.270e-61 Identity = 125/302 (41.39%), Postives = 159/302 (52.65%), Query Frame = 1
Query: 28 LLLLLSLLCLAGVSDLLQ-------GSGEVKSAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPARLWPLASRRRWALVRWDGGDHLKDR-------------------------PEVAGG-------------------------------SMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIV---SNTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVP---PGERLVVRTSML 726
LLLL SL+ +A VSD + +SA+Y+GRV H RF PT H F+Y IFYC +DLDEL FP +WP+ S R AL R+ DHLK R P A G S+++RVR IV++ATG RP G V+LLTHL+YLGYCFNPVSFYYC + + ++ +V SNTPW EMHCYVL P + GV++ AK + +R E T F KDFHVSPFM M +TYDW F+ P PG L+ +T++L
Sbjct: 20 LLLLSSLVAVALVSDAVARRXXXXXXXXXXRSAVYAGRVWHARFKPTAHHFSYPIFYCLVDLDELDIAFPWYIWPVGSARLPALSRFRSADHLKGRGAATPVFAAXXXXXXXXXXXAAAGDPVDAAGDGVGRNEGGRGASGPSRARATAATSSPPLSSSLADRVRDIVEEATGARPTGRVQLLTHLAYLGYCFNPVSFYYCLDKTEREIETVVAEVSNTPWGEMHCYVLNPKTKGVQVIAKDKSNDNDNNTSKRGTKEITRYRFEKDFHVSPFMSMKHTYDWKFTAPDASPGSGLMAQTTLL 321
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: UPI0008346118 (DUF1365 domain-containing protein n=1 Tax=Halofilum ochraceum TaxID=1611323 RepID=UPI0008346118) HSP 1 Score: 177 bits (450), Expect = 6.870e-52 Identity = 101/211 (47.87%), Postives = 123/211 (58.29%), Query Frame = 1
Query: 100 SAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHL--KDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIVS---NTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERLVVR 714
SAIYSG V H RF+P H F+Y +F +IDL EL R+F R LW S R +VR+D DHL DRP + E VR +VQ+ TG RP GP+RLLTH Y G+CFNPVSFYYC++A + ++ IV+ NTPW E HCYVL G HR + FRK FHVSPF+ MDY YDW F+ P G+RL V
Sbjct: 4 SAIYSGTVRHRRFAPRPHGFSYRVFMLYIDLGELDRVFRGRWLW---SVERPNIVRFDRRDHLGPHDRP------LDENVRDLVQERTGARPSGPIRLLTHPRYFGFCFNPVSFYYCFDAADRELETIVAEVHNTPWGERHCYVLPVDGDGTH---------HRFR-------------FRKAFHVSPFLDMDYDYDWRFTTP-GDRLTVH 182
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A6L3EL92_9PROT (DUF1365 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L3EL92_9PROT) HSP 1 Score: 168 bits (425), Expect = 5.320e-49 Identity = 94/204 (46.08%), Postives = 117/204 (57.35%), Query Frame = 1
Query: 91 EVKSAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHLKDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIV---SNTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVP 690
++KS IY G+V H RF+P RH F+Y +F ++DL EL R+F R LW S R AL R+ D+L D G ++ VR +V+ RP GP+RLLTHL Y GYCFNP SFYYC++AGG+ V+AIV +NTPW E H YVL G + + L A RK FHVSPFM MD YDW FS P
Sbjct: 2 KLKSCIYVGQVRHRRFAPARHGFSYRLFMMYLDLSELDRVFDGRWLW---SATRPALARFRRSDYLGD----PGVNLDTAVRDLVEARGVPRPTGPIRLLTHLRYFGYCFNPASFYYCFDAGGRFVEAIVVEVTNTPWAERHAYVLTAEKNGDPVTCRNL-------------------ALRKGFHVSPFMPMDIDYDWRFSDP 179
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A0S8AAD9_9GAMM (Chromosome partitioning protein ParA n=1 Tax=Gammaproteobacteria bacterium SG8_15 TaxID=1703403 RepID=A0A0S8AAD9_9GAMM) HSP 1 Score: 171 bits (432), Expect = 1.050e-48 Identity = 100/226 (44.25%), Postives = 134/226 (59.29%), Query Frame = 1
Query: 49 LCLAGVSDLLQGSGEVKSAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHLKDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIVS---NTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERLVVR 714
L L+ + ++L+G +KS IY+G+V H RF+P H F Y +F ++DL EL LF LW S +++AL + DH +P V + E +R +VQ+ TG RPRGP+RLLTH Y GYCFNPVSFYYC++ Q+V+ IV+ NTPW E HCYVL+ + + +H H+R F KDFHVSPFM +D YDW FS PGE+L V
Sbjct: 6 LALSMLLNILKGPKLMKSCIYTGQVRHRRFAPKAHEFRYRLFMMYVDLAELPFLFDKHWLW---SSKKFALAWFRREDHY-GKPGVR---LEESIRQLVQKETGRRPRGPIRLLTHFRYFGYCFNPVSFYYCFDDADQKVETIVAEVNNTPWGERHCYVLS--------EQRNVGNSH----HKR-------FQFGKDFHVSPFMDIDIDYDWRFS-QPGEQLNVH 204
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A7S2U4A5_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U4A5_9EUKA) HSP 1 Score: 171 bits (433), Expect = 1.700e-48 Identity = 101/224 (45.09%), Postives = 130/224 (58.04%), Query Frame = 1
Query: 67 SDLLQGSGEVKSAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPARLWPLASRR-RWALVRWDGGDHLKDRPEVAG-GSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQR--VQAIVSNTPWMEMHCYVLAPGSPGVEIAAKPL-PETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERLVVRTSM 723
+ ++ GS + +Y GRV H RF P H F Y +F +DLD + + WPL S RWA+ + DHLKD P+ G S+++RVR++V+ TG+ P G ++LLT+LSY GYCFNPVSFYYC N+ G V A VSNTPW EMH YVL P S V+ +P P T R AF+K FHVSPFM M++ YD+ F P L V TSM
Sbjct: 1 AGVIMGSLTNGTLLYDGRVWHKRFKPCVHGFNYALFMFLLDLDAVHQALRG-FWPLCSTSSRWAVAYFSEDDHLKDIPKNKGLQSLADRVRALVRSRTGKSPPGSIKLLTNLSYFGYCFNPVSFYYCLNSDGTLYCVVAEVSNTPWGEMHTYVLHPDSKDVKSMREPSQPYTKRY-------------AFKKTFHVSPFMDMEHNYDFSFHSPQ-RILQVNTSM 209
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A7Y3E507_9GAMM (DUF1365 domain-containing protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y3E507_9GAMM) HSP 1 Score: 168 bits (425), Expect = 5.250e-48 Identity = 100/211 (47.39%), Postives = 120/211 (56.87%), Query Frame = 1
Query: 94 VKSAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHLKDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIVS---NTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERLVVR 714
+KSAIYSG+V H R +P H+FTY +F ++DL E+ LF R LW S RR AL R+ DHL D P V S+ VR +V+ TG P GP+RLLT LSY GY FNPVSFYYCYNA ++ IV+ NTPW E HCYVL P Q H+R E K+ HVSPFM MD YDW F+ PP + L V
Sbjct: 1 MKSAIYSGQVRHRRTAPVEHAFTYRLFMMYLDLAEIPELFRNRWLW---SARRPALARFRRKDHLGD-PAV---SLDRAVRELVRGKTGTAPDGPIRLLTQLSYFGYVFNPVSFYYCYNADDTELETIVAEVNNTPWGEQHCYVL------------PQSMNRGSQAHKRYFPE-------KEMHVSPFMQMDVDYDWRFN-PPNDALTVH 184
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A7Y1W1F8_9GAMM (DUF1365 domain-containing protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y1W1F8_9GAMM) HSP 1 Score: 166 bits (421), Expect = 2.090e-47 Identity = 98/211 (46.45%), Postives = 124/211 (58.77%), Query Frame = 1
Query: 94 VKSAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHLKDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIVS---NTPWMEMHCYVL-APGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERLVV 711
+ SAI+ G+V H R P H+F+Y +F ++DL E+ +F R LW S RR+AL R+ DHL D P V + + VR +V++ G RP+GP+RLLTHLSY GYCFNPVSFYYC++A GQ+V+A+V+ NTPW E HCYVL G PG + PE K HVSPFM MD Y W FS PGE L V
Sbjct: 1 MNSAIFEGQVRHRRMRPKAHAFSYRMFMMYLDLAEIDTVFRGRWLW---STRRFALARFRREDHLGD-PAVP---LVDAVRDLVEREAGWRPQGPIRLLTHLSYFGYCFNPVSFYYCFDARGQQVEAVVAEVNNTPWGEQHCYVLDGSGKPGGAAQQRFSPE--------------------KQMHVSPFMPMDIRYGWHFS-RPGEILGV 183
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A0W0UB33_9GAMM (Protein of uncharacterized function (DUF1365) n=3 Tax=Legionella TaxID=445 RepID=A0A0W0UB33_9GAMM) HSP 1 Score: 166 bits (420), Expect = 2.710e-47 Identity = 93/209 (44.50%), Postives = 116/209 (55.50%), Query Frame = 1
Query: 100 SAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHLKDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIVS---NTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERLVVR 714
SAIY G V H R+ P RH F+YN+F F+DLDEL LF + W + R+ + ++ DHL D + + V +V++ TG R GPVRLLTHL Y GYCFNPVSFYYCY+A G+R++AIV+ NTPW E H YVL + L H Q F KDFHVSP M MD YDW S P E++ V
Sbjct: 8 SAIYKGSVIHRRYGPVRHQFSYNVFMVFLDLDELSTLFDSYWFWSVG---RYNIAQFKRSDHLGD----PANDLKQEVYKLVEEKTGHRLEGPVRLLTHLRYWGYCFNPVSFYYCYDATGKRLEAIVAEVNNTPWNEQHTYVLT--------------VSQNLASHEYQHF-----VFDKDFHVSPLMSMDMIYDWRLSAP-NEKIFVH 189
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Match: A0A5Q4EYT4_9GAMM (DUF1365 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A5Q4EYT4_9GAMM) HSP 1 Score: 166 bits (419), Expect = 3.840e-47 Identity = 96/206 (46.60%), Postives = 117/206 (56.80%), Query Frame = 1
Query: 100 SAIYSGRVSHTRFSPTRHSFTYNIFYCFIDLDELRRLFPAR-LWPLASRRRWALVRWDGGDHLKDRPEVAGGSMSERVRSIVQQATGERPRGPVRLLTHLSYLGYCFNPVSFYYCYNAGGQRVQAIV---SNTPWMEMHCYVLAPGSPGVEIAAKPLPETHRLQCHRRQATETTAAAFRKDFHVSPFMGMDYTYDWGFSVPPGERL 705
SAIY GR+ H R P H+F + +F ++DLDEL +F R LW S RR A DHL D G ++E VR +V+ G RP GP+RLLTHL Y G+CFNPVSFYYC++ G R+ A+V +NTPW E +CYVLA SP IA H R F KDFHVSPF+ MD YDW F+ PPG L
Sbjct: 3 SAIYRGRLEHHRHLPVAHAFRHQLFMVYLDLDELDEVFQGRWLW---STRRPAPAWLRRADHLGD----PGRPLAECVRDLVEARLGRRPAGPIRLLTHLRYFGHCFNPVSFYYCFDESGSRIDAMVLEVTNTPWHERYCYVLANASPEEHIA------------HYR---------FGKDFHVSPFLPMDMAYDWRFA-PPGGML 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6343.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6343.1.1 >prot_P-wetherbeei_contig6343.1.1 ID=prot_P-wetherbeei_contig6343.1.1|Name=mRNA_P-wetherbeei_contig6343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=242bp MIAWLLGAVLLLLLSLLCLAGVSDLLQGSGEVKSAIYSGRVSHTRFSPTRback to top mRNA from alignment at P-wetherbeei_contig6343:1940..3437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6343.1.1 ID=mRNA_P-wetherbeei_contig6343.1.1|Name=mRNA_P-wetherbeei_contig6343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1498bp|location=Sequence derived from alignment at P-wetherbeei_contig6343:1940..3437+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6343:1940..3437+ >mRNA_P-wetherbeei_contig6343.1.1 ID=mRNA_P-wetherbeei_contig6343.1.1|Name=mRNA_P-wetherbeei_contig6343.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=726bp|location=Sequence derived from alignment at P-wetherbeei_contig6343:1940..3437+ (Phaeothamnion wetherbeei SAG_119_79)back to top |