mRNA_P-wetherbeei_contig634.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: D7FHR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR8_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.950e-72 Identity = 123/262 (46.95%), Postives = 172/262 (65.65%), Query Frame = 1
Query: 52 ADAFALAIVRGSKSFVVNHPVLSFSWVLGLVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWF-SCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMRRDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVSRLEAER 834
AD F +V +K V HPV+S SWV+GL++S LA+G+TP A+ Y K+ L+ ES+++A+ M + YRRSKG F +C++ C N+K++E R + LN Y G DAKS LG+FS+ GV + +DLFW +++GG+ FAKRAT + A+ + RRD+ L+ + ++ F F+VNLTMGL A+ FLFS+W+VIW YQPDP+S AF ALGA S++ATWLLGL AV GVY V K AE +++EA R
Sbjct: 18 ADQFGALVVSNAKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLD--DESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRFVVNLTMGLFMAVFQFLFSMWTVIWSYQPDPLSTLAFAAMAALGAVSMLATWLLGLAAVGVTGVYTVAKLAETAQIEAAR 277
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A835Z0D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D4_9STRA) HSP 1 Score: 211 bits (536), Expect = 6.830e-63 Identity = 107/247 (43.32%), Postives = 160/247 (64.78%), Query Frame = 1
Query: 73 IVRGSKSFVVNHPVLSFSWVLGLVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWF-SCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMRRDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAE 810
+ +G+ V HPV+S SWV GL L+++ATGFTP P+A+ Y+ ++DL+ + L++A+ + Y SKGWF CD C+ N K + AR + Y + +AKSHLG+FS GV +A+DLFW R+AGGR+FA+R+T Y AI + + MRRD S++EY++ + + N+++G +GALVTFL+S+W VI +QP + A FF+ +L A SV+AT+ LGL A AG V G+V+ A+
Sbjct: 23 VAKGAAGVAVRHPVISLSWVAGLFLAIMATGFTPAPQAMEAYSFAVEDLKFYENELLQAQYEYDSWNVEYHESKGWFWQCDDHCQENYKSFVQAREDLRGKQRSYDGKLAEAKSHLGIFSTLGVAEARDLFWRRVAGGREFARRSTLYDAIFAGI-GSMRRDSSMAEYVMTMAVQVLWNMSIGAVGALVTFLWSVWGVIATFQPSAVVALLFFMCASLAAGSVIATFFLGLGAAGAGAVVGMVQLAK 268
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A7S2WRM9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRM9_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.650e-49 Identity = 96/268 (35.82%), Postives = 156/268 (58.21%), Query Frame = 1
Query: 13 HMAETRVAERPSAADAFALAIVRGSKSFVVNHPVLSFSWVLGLVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWFSCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMRRDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVS 816
H + AE + D + A++R +F H V++ ++++G+V+ L A GF E Y + L ++ + + +A+ E YR SKGWFSCD C N ++Y+L + ++ E+ +AKS +GVFS++GV + +DLFWS+ AGG+DFAKR++++ I ++ M RD+SL E+ L+ N ++N T+GL+GAL+ F + +W +I YQP + A FF+ ++ A S V ++LLGL + AG VY K A S
Sbjct: 4 HRRHSGTAETQLSVDDVSTALIRHGVAFAKRHYVMTSAYIVGVVIMLFAGGFAVSMEQEQKYERILSQID--LKRMHRAQVAAQNAEYNYRESKGWFSCDNHCMANYEEYQLNLARLAEVEKEFAEIQSEAKSVVGVFSEYGVQEVRDLFWSQFAGGKDFAKRSSWWDLIFMSI-GSMGRDESLMEFALRFLMNMLMNFTIGLVGALIGFYWFVWGIITSYQPSVLIAFVFFMLASIAATSCVVSFLLGLYSAAAGSVYVAAKIASNS 268
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A2R5GIG8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIG8_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.310e-47 Identity = 92/252 (36.51%), Postives = 150/252 (59.52%), Query Frame = 1
Query: 61 FALAIVRGSKSFVVNHPVLSFSWVLGLVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWFSCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMRRDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVS 816
F++ ++ G F + V + W+ GLVL L ATGF + TYN+ L ++ + + ++W+ + Y +SKGWFSCD+ C N ++ A+ + + E+ + +AK +G+FS++GV + ++LFWS+ AGGR+FA+R+++Y I ++ M RD+SL E+ L+L N ++N T+GLIGALV F + +W V+ YQP + A FF ++ A S+VA +L GL + AG V+ K A S
Sbjct: 31 FSMIMINGGVRFAKRNKVTTGMWIFGLVLVLFATGFQVSHQEEQTYNRILSKIDYKRLDAAQQQVYVWQHK--YAQSKGWFSCDEACHENYENLRAAQDNLYSIEKEFASISSEAKQTVGIFSEYGVQEVRELFWSQFAGGREFAQRSSWYDFIFMSI-SSMGRDESLVEFGLRLIVNMLLNFTIGLIGALVGFYYYLWGVVAAYQPSFLLAVGFFFLASVAATSLVAAYLAGLYSAAAGTVFVAAKIATQS 279
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A7S2A693_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A693_TRICV) HSP 1 Score: 170 bits (431), Expect = 2.440e-47 Identity = 101/258 (39.15%), Postives = 150/258 (58.14%), Query Frame = 1
Query: 76 VRGSKSFVVNHPVLSFSWVLGL-VLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWFSCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMR---RDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVS-RLEAER 834
+RG+ +F H V+S S+V GL VL L+ +G + Y+ + ++ +E A YR SKGWFSCD LC+ NK E AR+ + + E + DAK G+FS+ GVG+ KD FW R G+ FAKR + + A +F+GMR RD+S +EY L++ ++N ++GL+ AL F+F +W ++ YQPDP++A AFFL+ AF+ V T+LL + TAGG+YG+ K AE + R+E R
Sbjct: 23 LRGAAAFAKRHKVISGSYVFGLLVLLLVGSGTKLTLDQRRQYDHIMSTIDLNAE--FDASNRYAHAMHAYRASKGWFSCDSLCQRNKARMEDARAALEDIRAEGYNRMSDAKRVAGLFSEVGVGEVKDSFWERFHAGKRFAKRQSMWDA----MFMGMRSMGRDESFAEYALKMIVQVLINFSIGLVMALFIFIFGLWGIVRSYQPDPLTALAFFLSAVCAAFAFVTTYLLLIYGATAGGLYGMAKMAETNMRIEQGR 274
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A7S1D1B9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1B9_CYCTE) HSP 1 Score: 169 bits (428), Expect = 4.890e-47 Identity = 102/262 (38.93%), Postives = 156/262 (59.54%), Query Frame = 1
Query: 73 IVRGSKSFVVNHPVLSFSWVLG-LVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWF-SCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMR---RDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVS---RLEAER 834
IVRG F + VLS S++ G LVL + +G + YNK +D ++ +E +A + Y+ +KGWF SCD LC+ NK+ + A+ + E A + DAK+ G+FS+ GV + K+ FWS G+DFAKR++ + A +F+G+R RD++++EY L+L + N ++GLI ALV F+ +W+++ YQP+PI A AFFL AL AFS V ++LL + AGG+YG+VK AE + RL+ +R
Sbjct: 7 IVRGVTRFAHRNKVLSGSYLFGILVLIFMGSGTQLTLQQRREYNKIMDTIDIRAE--YEASQRYANARNAYQSTKGWFFSCDSLCQRNKQRMDRAKLDLDSVREEGNARMSDAKAVAGLFSEIGVDEVKESFWSYFQSGKDFAKRSSMWDA----MFIGLRSMSRDETMAEYALRLIIQILFNFSLGLIMALVIFVIGLWNIVSSYQPNPIVAVAFFLCAALAAFSFVISYLLVMYGAVAGGMYGIVKLAETNQRARLQEQR 262
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A7S2VYJ2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYJ2_9STRA) HSP 1 Score: 169 bits (429), Expect = 5.540e-47 Identity = 97/260 (37.31%), Postives = 150/260 (57.69%), Query Frame = 1
Query: 43 PSAADAFALAIVRGSKSFVVNHPVLSFSWVLG-LVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWFSCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMR---RDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAE 810
P+A D ++ +VRG +F H V+S S++LG LVL + TG + YN ++ ++ +E A + R Y+ SKGWF+CD LC+ NK+ E + ++ E A + DAKS G+FS+ GV + KD FW G+ FAKR + + A LF+GMR RD+++ EY L+L ++N ++GLIGAL F++ +W+++ YQPDP++A AFF+ F+ V+T+L + AG VYG+ K E
Sbjct: 15 PNAGDMGSI-VVRGVTNFARKHKVISGSYILGVLVLLIFTTGTKLTLQQRQQYNSIMNTIDLKAE--YDASDRYGRAAHAYQSSKGWFTCDGLCQRNKRRMEAVKQDLDEVRAEGNARMSDAKSKAGLFSEVGVAEVKDSFWDYFHKGKQFAKRRSMWDA----LFMGMRSMGRDENILEYCLKLLLQVLINFSLGLIGALFIFVWGLWTIVNSYQPDPLTAAAFFVGATCAGFAFVSTYLFLIYGAAAGSVYGLAKVVE 267
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A7S0C9V1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9V1_9STRA) HSP 1 Score: 169 bits (429), Expect = 7.250e-47 Identity = 102/263 (38.78%), Postives = 154/263 (58.56%), Query Frame = 1
Query: 43 PSAADAFALAIVRGSKSFVVNHPVLSFSWVLGLVLSLLA-TGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWF-SCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMR---RDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVS 816
P+++D ALA V G K+F + V++ S++ GL++ +L +G+ E YN+ + ++ +E A YR +KGWF SCD LC+ NK E A+ + E + DAK+ G+FS+ GVG+ KD FW G+ FAKR T + A LF GMR RD+S+ EY+L++ N ++N ++GLI AL F+F +WS++ YQPDP++A AFFL+ + AF+ V+T+L + AG VYGV K AE +
Sbjct: 24 PNSSDFGALA-VSGVKAFAKRNKVITGSYLFGLIIVVLGGSGYQLSREQSIQYNQIMSTIDLKAE--YDASNKYASANQAYRATKGWFFSCDSLCQRNKSRMEHAKRDLGMIRAEGYNRMSDAKASAGIFSEVGVGEVKDSFWEYFQSGKQFAKRQTMWDA----LFTGMRSMGRDESMMEYVLKVLMNALINFSLGLIMALFIFIFGLWSIVKSYQPDPLTAVAFFLSASCAAFAFVSTFLFFMYGAAAGSVYGVAKLAEAN 279
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A1E7FAB6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAB6_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.990e-46 Identity = 94/260 (36.15%), Postives = 153/260 (58.85%), Query Frame = 1
Query: 73 IVRGSKSFVVNHPVLSFSWVLG-LVLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWFSCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMR---RDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVSRLEAERNG 840
I+RG+ F H V++ +VLG LV+ L+ G + YN ++ ++ E+ A + YR +KGWFSCD LC+ NK+ + A+ ++ E + DAK+ G+FS+ GVG+ +D FWS + G+ FAKR + + A +F+G+R RD+++ EY +++ ++N ++GL+ ALV F+ +WS++ YQP+PI A AFF++ + AFS V T+L + AGGVYGV+K AE L+ ++ G
Sbjct: 32 IIRGASDFAKQHKVITGGYVLGILVIILIGGGSKLNYDQRREYNNIMNTID--VEAEYAASNDFFAANQNYRATKGWFSCDGLCQRNKRKMDDAKIRLDRIREEGNVRMSDAKNVAGLFSEIGVGEVQDAFWSYFSAGKKFAKRQSMWDA----MFMGIRSMGRDENMVEYGMKVLMQVLLNFSIGLVMALVMFVVGLWSIVRSYQPNPIVAVAFFVSASCAAFSFVTTYLFAIYGAAAGGVYGVLKIAE-GNLQIQQQG 284
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Match: A0A7S2IIT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IIT0_9STRA) HSP 1 Score: 167 bits (422), Expect = 7.490e-46 Identity = 94/252 (37.30%), Postives = 146/252 (57.94%), Query Frame = 1
Query: 73 IVRGSKSFVVNHPVLSFSWVLGL-VLSLLATGFTPPPEALNTYNKKLDDLEGWSESLVKAEEHMWRTEMTYRRSKGWFSCDQLCRMNKKDYELARSHFQQLNTEYTAGIRDAKSHLGVFSDHGVGQAKDLFWSRLAGGRDFAKRATFYSAIRSALFVGMR---RDQSLSEYLLQLFFNFIVNLTMGLIGALVTFLFSIWSVIWEYQPDPISATAFFLACALGAFSVVATWLLGLCAVTAGGVYGVVKAAEVS 816
IV G+KSF H V++ S++ GL +L ++ +G E YN + ++ +E A Y+ SKGWF+CD LC+ NK+ E A+ QL E + DAK+ G+FS+ GVG+ KD FW G+ FAKR + + A +F+GMR RD+S+ EY+L++ ++N ++GLI L F+F +WS++ YQP+P++A AFFL+ A AF+ V+T+L + AGG+YG K + +
Sbjct: 54 IVAGAKSFAKKHKVITGSYLFGLLILLIVGSGTKLTLEQQRQYNHIMSTIDVNAE--YDASTRYGHALQAYKASKGWFTCDSLCQRNKERMERAQYDLDQLRAEGYNRMSDAKAVAGIFSEVGVGEVKDSFWEYFHAGKRFAKRQSMWDA----MFMGMRSMSRDESMVEYMLKMLIQVLINFSLGLIMCLFIFIFGLWSIVRSYQPNPLTAVAFFLSAACAAFAFVSTYLFLIYGAAAGGLYGAAKIIQAN 299 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig634.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig634.2.1 >prot_P-wetherbeei_contig634.2.1 ID=prot_P-wetherbeei_contig634.2.1|Name=mRNA_P-wetherbeei_contig634.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp MAETRVAERPSAADAFALAIVRGSKSFVVNHPVLSFSWVLGLVLSLLATGback to top mRNA from alignment at P-wetherbeei_contig634:508..2208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig634.2.1 ID=mRNA_P-wetherbeei_contig634.2.1|Name=mRNA_P-wetherbeei_contig634.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1701bp|location=Sequence derived from alignment at P-wetherbeei_contig634:508..2208+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig634:508..2208+ >mRNA_P-wetherbeei_contig634.2.1 ID=mRNA_P-wetherbeei_contig634.2.1|Name=mRNA_P-wetherbeei_contig634.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig634:508..2208+ (Phaeothamnion wetherbeei SAG_119_79)back to top |