mRNA_P-wetherbeei_contig6335.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: A0A166H2E2_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium 5E7 TaxID=1701324 RepID=A0A166H2E2_9BACT) HSP 1 Score: 119 bits (298), Expect = 1.070e-33 Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 1
Query: 13 RRAALVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHR 210
RRA L RKEVIQPQLPLRLPCYDF PIT PTLDG +LAVRPPASGVAGFR VTGGVYKAREHIHR
Sbjct: 16 RRAWLDSRKEVIQPQLPLRLPCYDFTPITDPTLDGSLLAVRPPASGVAGFRGVTGGVYKAREHIHR 81
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: C9LVX4_SELS3 (Uncharacterized protein n=1 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) TaxID=546271 RepID=C9LVX4_SELS3) HSP 1 Score: 101 bits (251), Expect = 1.970e-26 Identity = 48/69 (69.57%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 7 VGRRAALVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHRS 213
+ R A RKEVIQP LP+RLPCYDF P+ +P LDGC+LAV PPA GV FR VTGGVYKARE IHRS
Sbjct: 22 LASRTAQHLRKEVIQPHLPIRLPCYDFTPVIAPALDGCLLAVGPPALGVNDFRGVTGGVYKARERIHRS 90
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: B0TIG7_HELMI (Uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) TaxID=498761 RepID=B0TIG7_HELMI) HSP 1 Score: 99.0 bits (245), Expect = 4.820e-25 Identity = 47/64 (73.44%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 19 AALVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHR 210
AA + RKEVIQP LP+RLPCYDF PI PT GC+LAV P SGVA FR VTGGVYKARE IHR
Sbjct: 65 AASLHRKEVIQPHLPIRLPCYDFTPIIDPTFGGCLLAVSAPTSGVADFRGVTGGVYKARERIHR 128
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: E6D4T5_CUTAC (Uncharacterized protein n=2 Tax=Actinomycetia TaxID=1760 RepID=E6D4T5_CUTAC) HSP 1 Score: 95.5 bits (236), Expect = 3.390e-24 Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 1
Query: 34 RKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHRS 213
RKEVIQP LP+RLPCYD V ITSPT DG VRPPASGV F D+TGGVYK RE IHRS
Sbjct: 21 RKEVIQPHLPVRLPCYDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKPRERIHRS 80
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: A0A1N4FL82_9MYCO (Uncharacterized protein n=8 Tax=Actinomycetia TaxID=1760 RepID=A0A1N4FL82_9MYCO) HSP 1 Score: 95.1 bits (235), Expect = 5.240e-24 Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 1
Query: 34 RKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHRS 213
RKEVIQP LP+RLPCYDFVPI PT D + VRP ASGV F DVTGGVYKARE IHRS
Sbjct: 14 RKEVIQPHLPVRLPCYDFVPIADPTFDSSLQKVRPLASGVTDFHDVTGGVYKARERIHRS 73
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: A0A1K5CGM2_MYCTX (Uncharacterized protein n=1 Tax=Mycobacterium tuberculosis TaxID=1773 RepID=A0A1K5CGM2_MYCTX) HSP 1 Score: 94.0 bits (232), Expect = 8.870e-24 Identity = 44/59 (74.58%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 34 RKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHR 210
RKEVIQP LP+RLPCYDF PI PT DG +LAV PPASGV R VTGGVYK RE IHR
Sbjct: 11 RKEVIQPHLPIRLPCYDFTPIIYPTFDGWLLAVTPPASGVVNSRGVTGGVYKTRERIHR 69
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: B0N074_9FIRM (Uncharacterized protein n=1 Tax=Erysipelatoclostridium ramosum DSM 1402 TaxID=445974 RepID=B0N074_9FIRM) HSP 1 Score: 93.6 bits (231), Expect = 1.300e-23 Identity = 45/70 (64.29%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 MCVGRRAALVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHR 210
MC+ A + RKEVI P +P+ +PCYDF PI +PTLD LAVRPPASGV R VTGGVYKARE IHR
Sbjct: 1 MCIIFDHAFLLRKEVIHPHVPVGIPCYDFTPIINPTLDSSFLAVRPPASGVINSRGVTGGVYKARERIHR 70
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: UPI001A5F1502 (Uncharacterized protein n=1 Tax=Bifidobacterium longum TaxID=216816 RepID=UPI001A5F1502) HSP 1 Score: 96.7 bits (239), Expect = 3.330e-23 Identity = 50/70 (71.43%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 10 GRRAA--LVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCV-LAVRPPASGVAGFRDVTGGVYKAREHIHR 210
GRR A ++ RKEVIQP LP+RLPCYD VPITS TLDG + VRPPASG A F D+TGGVYKARE IHR
Sbjct: 130 GRRTASCILRRKEVIQPHLPVRLPCYDLVPITSLTLDGSIPQGVRPPASGAAHFHDLTGGVYKARERIHR 199
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: E0XU79_9CHLR (Uncharacterized protein n=1 Tax=uncultured Chloroflexi bacterium HF0200_09I09 TaxID=710736 RepID=E0XU79_9CHLR) HSP 1 Score: 94.7 bits (234), Expect = 1.120e-22 Identity = 45/62 (72.58%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 28 VPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHRS 213
+PRKEVIQPQLPLRLPCYDFVP+ PTL CV VR GV DVTGGVYKARE IHRS
Sbjct: 95 LPRKEVIQPQLPLRLPCYDFVPVAGPTLGACVPKVRAATLGVTDSHDVTGGVYKARERIHRS 156
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Match: A0A0P0YVL6_9HYPH (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A0P0YVL6_9HYPH) HSP 1 Score: 91.3 bits (225), Expect = 2.240e-22 Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 16 RAALVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGVAGFRDVTGGVYKAREHIHR 210
R +V RKEVIQPQ+PLRLPCYDF P+ PT+ GC+LAV P SG VTGGVYKARE IHR
Sbjct: 33 RDGIVLRKEVIQPQVPLRLPCYDFTPVADPTVVGCLLAVSAPPSGRTNSHGVTGGVYKARERIHR 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6335.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6335.7.1 >prot_P-wetherbeei_contig6335.7.1 ID=prot_P-wetherbeei_contig6335.7.1|Name=mRNA_P-wetherbeei_contig6335.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp MCVGRRAALVPRKEVIQPQLPLRLPCYDFVPITSPTLDGCVLAVRPPASGback to top mRNA from alignment at P-wetherbeei_contig6335:2433..2645+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6335.7.1 ID=mRNA_P-wetherbeei_contig6335.7.1|Name=mRNA_P-wetherbeei_contig6335.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig6335:2433..2645+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6335:2433..2645+ >mRNA_P-wetherbeei_contig6335.7.1 ID=mRNA_P-wetherbeei_contig6335.7.1|Name=mRNA_P-wetherbeei_contig6335.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig6335:2433..2645+ (Phaeothamnion wetherbeei SAG_119_79)back to top |