mRNA_P-wetherbeei_contig632.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig632.3.1
Unique NamemRNA_P-wetherbeei_contig632.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 603 bits (1556), Expect = 5.230e-193
Identity = 348/647 (53.79%), Postives = 428/647 (66.15%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRS-AGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTA-GAVAPSGLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAG 1935
            Q+VSGV LEAYWLS+Y+WD      P   TL ILA A VD+L+  E      LL  LYG + P + Y  SF F  ++ AQ   +   +I GL+ P+   I+ F D   S  G   + + R+ P ++LGSGL  + F  +L++F      YT     IAG S+I +   +  Y  L L  ER  AG + L+     L +    K L+P QLGDED ID DV AE  RV  G A  + V+VAGLRK+YP S+    G KVA+KST LGIPRGECFGLLGINGAGK++TL+ILSGE  PT G+A L G DV + PE IHRLVG+CPQFDALFE +T REHL LY  IKGIPA     AV+ KI+EM L  YA++PAGGYSGGNKRKLSVA++MIG P+IVFLDEPSTGMDP+ARR MW VI  IVT + +CAMILT+HSMEE EALC RIGIMVGGRLRCLG+SQHLK+RFG G Q+E  V+     E D+ ++ +A AT   G +   G       L   LAAA   DL AE+SATGRGA+++  +  +G VP RD+AAW   +   S V  F+ + FAGA +RE+Q AK+RFE PPQ    L  MFGV+E+ RE L I  Y+LSQTSLEQ+FN FA+QQEEELG AAG
Sbjct: 1331 QVVSGVGLEAYWLSSYLWDFVSLIPPMAFTLIILAAADVDTLISGEAGATTFLLFLLYGTSMPCYTYLWSFAFKNYSTAQNAFLFHNWITGLILPIATSIMAFFDGKVSDIGDGIAALARLIPQYALGSGLMKMSFIPILSFFNN--TEYTPLDGAIAGNSLIYMGVCSVVYFVLLLVFERISAGGSFLSGIYGKLVLGRSLKKLTPKQLGDEDNIDKDVRAEMDRVAAGAADNDVVKVAGLRKVYPVSN----GAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSGGNKRKLSVAMAMIGDPQIVFLDEPSTGMDPMARRFMWNVIMRIVTENKECAMILTTHSMEECEALCQRIGIMVGGRLRCLGTSQHLKTRFGKGFQLEARVKAILPEETDAMMAELAPATNGQGTLGNDG-----GVLRAALAAAQAPDLEAEVSATGRGASIYHAIANQGGVPVRDLAAWICVEKKCSKVIAFMQQQFAGAVMREKQNAKMRFEFPPQKNQTLAQMFGVVENEREALCIGEYALSQTSLEQVFNGFAAQQEEELGHAAG 1966          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 597 bits (1539), Expect = 1.090e-190
Identity = 342/647 (52.86%), Postives = 428/647 (66.15%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRS-AGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTA-GAVAPSGLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAG 1935
            Q+VSGV LEAYWLS+++WD      P   TL +LA A V +L+  E   A  LL  L+G + P + Y  SFLF  ++ AQ   +   +I GL+ P+   I+   +   S  G   + VLRI P F+LG GL  + F     +   +   YT  +  I G +++ +A     ++ L L  ER  AG + L+     L V      L+P QLGDEDEID DV AE  RV GGGA  + V+V GLRK+YP+S    GG KVA+KST LGIPRGECFGLLGINGAGK++TL+ILSGE  PT G+A+L+G DV + PE IHRLVG+CPQFDALFE +T REHL LY  IKGIPA     AV  KI+EM L +YAD+PAGGYSGGNKRKLSVA++MIG P+IVFLDEPSTGMDP+ARR MW VI  IVT + +CAMILT+HSMEE EALC RIGIMVGGRLRCLG+SQHLK+RFG G Q+E  V+     E D+ ++ +A AT   G +   G       L   LAAA   +L AE+S TGRGA+++  +  +G V  RD+AAW   +   S V  F+ + FAGAA+RE+Q AK+RFE PPQ    L  MFG +E+ R+ L I  Y+LSQTSLEQ+FN FA+QQEEELG AAG
Sbjct: 1311 QVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSMPCYTYLWSFLFKNYSKAQNAFLFHNWITGLILPIATTIMSLFEGAVSDVGRGMAAVLRIVPSFALGDGLMNMSFMEFFGFLDDK--DYTALSMRITGNALLYMAICGVIFLGLLLVTERASAGGSALSGLCGRLSVGRSLGKLTPRQLGDEDEIDEDVRAEMDRVAGGGADNDVVKVKGLRKVYPAS----GGAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSAYLSGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYASIKGIPADKRSAAVDQKIEEMGLKQYADRPAGGYSGGNKRKLSVAMAMIGDPQIVFLDEPSTGMDPMARRFMWNVIMRIVTENKECAMILTTHSMEECEALCQRIGIMVGGRLRCLGTSQHLKTRFGKGFQLEARVKAITHEETDAMMATLAHATNGQGTLTNDG-----GVLRAALAAAQAPELEAEVSPTGRGASIYHAIANQGGVSVRDLAAWICVEKKCSRVIAFMQQHFAGAALREKQNAKMRFEFPPQKNQTLAQMFGFIENERDSLFIGEYALSQTSLEQVFNGFAAQQEEELGHAAG 1946          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: A0A6H5L5M8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 544 bits (1401), Expect = 3.110e-178
Identity = 331/677 (48.89%), Postives = 410/677 (60.56%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRS-AGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPE------------------------------IVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTA-GAVAPSGLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAG 1935
            Q+VSGV LEAYWLS+Y+WD      P   TL ILA A V +L+  E      LL  LYG + P + Y  SF F  ++ AQ   +   +I GL+ P+   I+ F D   S  G   + + R+ P ++LGSGL  + F  +L++F      YT     IAG S+  +   +  Y  L L  ER  AG + L+     L +    K L+P QLGDED ID DV AE  RV  G A  + V+VAGLRK+YP S+    G KVA+KST LGIPRGECFGLLGINGAGK++TL+ILSGE  PT G+A L G DV + PE IHRLVG+CPQFDALFE +T REHL LY  IKGIPA     AV+ KI+EM L  YA++PAGGYSGGNKRKLSVA++MIG P+                              IVFLDEPSTGMDP+ARR MW VI  IVT + +CAMILT+HSMEE EALC RIGIMVGGRLRCLG+SQHLK+RFG G Q+E  V+     E D+ ++ +A AT   G +   G       L   LAAA   +L AE+S TGRGA+++  +  +G VP RD+AAW   +   S V  F+ + FAGA +RE+Q AK+RFE PPQ    L  MFGV+E                    +FN FA+QQEEELG AAG
Sbjct:  414 QVVSGVGLEAYWLSSYLWDFVSLMPPMAFTLIILAAADVGTLISGEAGATTFLLFLLYGTSMPCYTYLWSFAFKNYSTAQNAFLFHNWITGLILPIATSIMAFFDGKVSDVGDGIATLARLVPQYALGSGLMKMSFIPILSFFND--TEYTPLDGAIAGNSLRYMGVCSVVYFVLLLVFERISAGGSFLSGIYGKLVLGRSLKKLTPKQLGDEDNIDEDVRAEMDRVATGAADNDVVKVAGLRKVYPVSN----GAKVAVKSTSLGIPRGECFGLLGINGAGKSSTLAILSGELPPTTGSALLGGFDVGKNPEEIHRLVGYCPQFDALFETLTGREHLALYAAIKGIPADKRSAAVNQKIEEMGLTRYAERPAGGYSGGNKRKLSVAMAMIGDPQVGNKNRETSEAKDDGSSTVVAELRELPRLSIVFLDEPSTGMDPMARRFMWNVIMRIVTENKECAMILTTHSMEECEALCQRIGIMVGGRLRCLGTSQHLKTRFGKGFQLEARVKAILPEETDAMMTELASATNGQGTLGNDG-----GVLRAALAAAQAPELEAEVSPTGRGASIYHAIANQGGVPVRDLAAWICVEKKCSKVIAFMQQQFAGAVMREKQNAKMRFEFPPQKNQTLAQMFGVVE--------------------VFNGFAAQQEEELGHAAG 1059          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 554 bits (1427), Expect = 2.330e-174
Identity = 316/650 (48.62%), Postives = 412/650 (63.38%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTI-PAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAVAPSGLQINKDQLPVVLAAAGH--GDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGLK 1941
            Q+VSGV+L AYWLS+Y WD   Y + P   T  +LA   +++LV  +  GA  L L L GLA  PF Y ++F F   +   V +++L   LGLL  + + I+  I ST+        + R+FPP+  G+ +  + FR  L+         + W   I+G +++ LA     Y    L +ER  AG+  LA  +  L++R   K  +P     E E+DADVA E  RV GGGA G+ +R+  +RK +P       G K A++   LGIPRG+CFGLLGINGAGKTTTL+ILSGE  PT GAAFLAG ++   PE  HRL+G+CPQFDA+F  +T RE+L LYG +KGIP   L + +   IQ MSL EYAD+ +G YSGGNKRKLSV ++MIGGPE+VFLDEPSTGMDPVARR MW+VI+ I T   +CA+ILT+HSMEE EALC+RIGIMVGGRLRCLGS+Q LKSRFG G Q+E+ +R P+  E+   L  +A    A A   +  ++ +     VLAA G        +   TG GA L+  +  RG V   D+ A+   +  A+    FV  TF GA +RE+Q  KLRFE PPQPG+ALG+MFG LED R  LG+  Y+LSQT+LEQ+FNFFA QQEEE G AAG++
Sbjct: 1321 QVVSGVSLNAYWLSSYAWDFCQYLLGPFLLTEILLAAFDIEALVNGDGGGAACLALLLNGLAIVPFTYLLTFFFKSASVGTVLVLILNIALGLLLTMVMFIMLLIPSTQKVAKKLQWLFRLFPPYCFGNTMLSVAFREFLSLIDDAPGSLSPWDNTISGYNLVFLAWEAVVYFLGVLLVERLSAGSNPLAQKLDRLKLRG--KRYAPRDPPRE-EVDADVAEEEDRVLGGGAEGDVIRIHRIRKAFPDGPCGR-GYKEAVRGLSLGIPRGQCFGLLGINGAGKTTTLTILSGEQPPTEGAAFLAGLNIAENPEEAHRLIGYCPQFDAIFGSLTGRENLWLYGRLKGIPKKYLGELIEQTIQMMSLTEYADRLSGTYSGGNKRKLSVGIAMIGGPELVFLDEPSTGMDPVARRFMWDVITKISTERQQCAVILTTHSMEECEALCTRIGIMVGGRLRCLGSAQRLKSRFGLGFQLELGLRLPSEEELADGLRRVAEGAPAAAAGGAAQRLAQQDFAPVLAALGADPAQWLPKFCETGAGALLYHELLARGGVALGDLVAFHARERRAAQAEAFVADTFKGAVLREKQSGKLRFEYPPQPGLALGEMFGALEDRRAQLGVEEYALSQTTLEQVFNFFAGQQEEETGRAAGIQ 1966          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 2.300e-171
Identity = 325/660 (49.24%), Postives = 413/660 (62.58%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAY---------FKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRARE--KHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAVAPS---GLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGL 1938
            Q+VSGV LEAYW S+++WD   + +P    + +    GVDSL       A  LL  L+GL+  P+ Y  SF+F+ H+ AQ   +   F+LG+L P   V L  I + +        VL +FP       L  +GF  ++           F+   DP+    +    RS+  +A     Y    L +ER  AG + L++      V A      +SP QLG+ D +D DVA E  RV  GG  G+AV++ G+ K+YP+ +    G KVA+KST LGIP+G+CFGLLGINGAGK++ LSILSG    TAGAA L GHDV +EPEAIHRL+G+CPQFDALFE +T REHLRLY  IKGIPAA +E+A S  I ++ L +YADK AG YSGGNKRKLSVAV+MIG P+IVFLDEPSTGMDP+ARR MW  I  IVT++  CAMILT+HSMEE EALC RIGIMVGGR+RCLGSSQHLK+RFG G Q+E  V   +  +ID+ L+ +A AT   A  PS   G  ++  Q P         + A EI+A GRGA ++  +     V  RD AAW   + + S V  FV  +F GA +RE+Q AK+RFE+P Q    LG MFG +EDS   LG+  YSLSQ SLEQIFN FASQQ+EE G AAG+
Sbjct: 1328 QIVSGVGLEAYWFSSFLWDFGSFLVPMTFAIVLFKGLGVDSLFENGADAAFVLLFILFGLSMVPYTYLGSFMFSSHSKAQNLWLFHNFVLGILGP---VALFSIPNEKWYQDALLFVLNLFPQVCFSFALLVLGFTNVVGGDEEGEGEDDFEDDFDPF----DKFVRRSLTYMACEVVVYTIFLLLIERYSAGGSCLSSLCGKAAVGASTLLSSVSPQQLGEGDVLDEDVARETERVRQGGGDGDAVKIEGVTKVYPTHA----GAKVAVKSTSLGIPKGQCFGLLGINGAGKSSLLSILSGGIPATAGAASLGGHDVGKEPEAIHRLMGYCPQFDALFETLTGREHLRLYAAIKGIPAAEVEEAASTMITDLGLGQYADKLAGSYSGGNKRKLSVAVAMIGDPQIVFLDEPSTGMDPMARRMMWNYIMRIVTQNRSCAMILTTHSMEECEALCQRIGIMVGGRMRCLGSSQHLKTRFGKGFQLEARVGAVSPTDIDAMLATIAPATGGQASLPSELCGPALDAAQCP---------EFAPEITAEGRGAMVYHALANERTVLARDFAAWLCLEQSCSRVIAFVESSFKGARLREKQNAKMRFEIPQQEDKTLGAMFGFIEDSAAELGVGEYSLSQISLEQIFNGFASQQQEEQGRAAGI 1967          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: A0A7S4D9H3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9H3_HETAK)

HSP 1 Score: 512 bits (1319), Expect = 5.070e-159
Identity = 308/649 (47.46%), Postives = 387/649 (59.63%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTI-PAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRA--DPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAVAPSGLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGL 1938
            Q+VSGVNL AYWLS+++WD F Y   P    +A+L I  V+ LVG   V A   L  L+GLA  PF Y  SF F     AQ   IL+ +I GLL   T  I+  I ST+   VL     R+FP +     L  + FR  L +F      DP + W   +AG  I  L      Y  L L  ER  AG++ LA  +A                        DV  E++RVE GG  G+ +RV GLRK +PS     GG K A++   LG+PRGECFGLLGINGAGK+TT+SIL+GE  PT+G   LAG DV  + E +H+LVG+CPQFDA+F L+T RE+LR+YG IKGIPA LLE  V   I+++ L  YAD+ A GYSGGNKRKLSV V++IG PE++FLDEPSTGMDPV RR +W+V++ I T  A+CAM+LT+HSMEE EALC+RIGIMVGGRLRCLGS QHLKSRFG G Q+E  +  P   E+    SA +V      V  S L      L  +       D   + SA+G  + LH  +   G +  + + +W + +    A   FV R F  + +RERQG K RFE P Q    LG MF +LE+++  L I  YSLSQTSLEQIFN FA+QQEEE G  AGL
Sbjct: 1330 QVVSGVNLNAYWLSSWIWDSFQYLAGPMALCIAMLYIFDVEILVGNA-VDATLTLFILFGLAVVPFTYICSFFFNSAPVAQNLSILMNWIFGLLLMCTTFIMSLIPSTQGDAVLLRRAFRVFPQYCFADALLRVSFRDFLYFFDSAVPRDP-SPWHPEVAGLDIAWLGGEVLAYGLLLLAAERAAAGSSPLARRVAAAXXXXXXXXXXXXXXXX---XXXDVQEEQARVEAGGPHGDVIRVHGLRKAFPSR----GGFKEAVRGLTLGVPRGECFGLLGINGAGKSTTMSILTGEQPPTSGRGELAGMDVTADAERVHQLVGYCPQFDAIFPLLTGRENLRIYGRIKGIPARLLEPLVERTIRQLRLDAYADRLAAGYSGGNKRKLSVGVAIIGAPELIFLDEPSTGMDPVVRRYLWDVVTKISTEWAQCAMVLTTHSMEEAEALCTRIGIMVGGRLRCLGSGQHLKSRFGLGFQLEFGLELPTEDEVHKIFSASSVLGAKEVVPESDLWATMKSLLGIEEETAKQDWLGKFSASGSASALHHELVAHGHIQAQSLVSWLLLEQRCIAAHSFVERFFEHSVLRERQGPKFRFEYPVQD-KPLGRMFAILEENKASLKIKEYSLSQTSLEQIFNHFANQQEEEKGKVAGL 1968          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: A0A835YSC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC0_9STRA)

HSP 1 Score: 497 bits (1280), Expect = 1.610e-152
Identity = 320/754 (42.44%), Postives = 430/754 (57.03%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVD-SLVGREEVG-AVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLS-PYQLGDED------------------------------------EI---DADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAP---------------TAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAVAPSGLQINKDQLP-------------------VVLAAAG-HGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAA-------------------SAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGDMFGVLEDSREGLGIVSYSL-------------SQTSLEQIFNFFASQQEEELGAAAG 1935
            Q+VSGV+L AYW S Y WD+  + +   A +A+LA+ G   SL+     G A  LLL L+G A+    Y +SF FT H+ +   I+ + ++ GL+APL +  + F DS ++   +   VLRI P F LG GL  +G R ++ +        T ++  +AG +++ +      Y  LTL++ER  +GT  + +Y +D R+  R   L  P    D D                                    E+   D DV  ER RV  G    + +++ GLRK+YP+S+    G+KVA+++ +LGIP+G+CF LLGINGAGKTT +S L GE  P               T G A LAG DV ++ EA+HRL+G+CPQFDALFE MTAREHL +Y  IKG+  + ++ A   K+ EM L++YADK AGGYSGGNKRKLSVAV+M+GGPEIVFLDEPSTG+DPVARR MWEVIS IVT + +CA++LT+HSMEE EALC RIGIMVGGRL+CLGS+QHLKSRFG G+Q+EV+   P +A   +A  A ++  +AG VAP                              V  A  G +  L +EIS  GRG+ L   +   G++  +DVA WA+ ++A                    +A+  F+ R FAGA + E+QG KLR  LPPQ GM LG +FG++EDSR  LGI  Y+L              QTSLEQIFN FA++Q EE   A G
Sbjct: 1632 QVVSGVSLAAYWASTYAWDMASFILTPPAVMALLAMFGKSGSLIDGAAAGLACFLLLLLWGPANMGCTYFLSFFFTSHSISMTTILFINWVFGLIAPLAVFFMLFFDSVKTIARVLKWVLRIHPGFCLGDGLLNLGNRAIVRFALNLDSDPTPFSIQVAGANLLYMLVEIFVYALLTLWVERVFSGTRTIMSYFSDKRLARRMNALKDPDSFWDSDLKGAAPEGAGSGKKRSGWCCKSAGVEDVAMVPAGGAEVVSEDPDVLTERDRVSRG--VSDVIQIQGLRKVYPAST----GMKVAVRNMWLGIPKGQCFALLGINGAGKTTAISTLCGEQQPCXXXXXXXXXXXXXXTQGRATLAGVDVAKDAEAVHRLIGYCPQFDALFESMTAREHLEMYARIKGLRESDVKAAAEAKMTEMDLLQYADKLAGGYSGGNKRKLSVAVAMLGGPEIVFLDEPSTGVDPVARRHMWEVISRIVTTNKQCALVLTTHSMEEAEALCQRIGIMVGGRLQCLGSAQHLKSRFGSGYQLEVTAALPTSAAASAA--AQSLCASAG-VAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKQALRGSYPALESEISQDGRGSLLWQELLAEGSIQTQDVAEWALQESACRKSRVXXXXXXXXXXXXXXNAILAFIARHFAGAQLLEKQGGKLRLALPPQEGMTLGAIFGLIEDSRAELGIGDYALXXXXXXXXXXXXXGQTSLEQIFNGFAAKQAEETSDAPG 2376          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: W2KUR6_PHYPR (ABC transporter domain-containing protein (Fragment) n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KUR6_PHYPR)

HSP 1 Score: 456 bits (1172), Expect = 1.490e-149
Identity = 280/662 (42.30%), Postives = 391/662 (59.06%), Query Frame = 1
Query:   19 NLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGRE-------EVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGI---GFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDED-EIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAVAPSGLQINKDQLPVVLAAA-------GHGDLAAEISATG-RGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTF--AGAAVRERQGAKLRFELPPQPG-MALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGL 1938
            +L A+WLS Y+WD+  YTIP  ATL +L +  + +L G +          +V LL  L+GLA  PF YA+SFLF +HA+AQ Y I+L F++G++  +T  IL  IDST     +     R  P FSLG+ L  +    F ++ +   G   P+      + G  +I L     F+  LTL L+   A             V+  +   S  +  D D E+D DV  E  RV  GGA  +AV++  LRK+YP       G KVA+++   G+ RGECFG LGINGAGKTTT+ +L+G+  PT G+A L G D++ +   + R +G+CPQFDALF+L++ REHL L+G IKG+P + L+  V DKI +++L ++  K AG  SGGNKRKLSVA++MIG P I+FLDEPSTGMDPV+RR MW+VI++I TR  +  ++LT+HSMEE EALCS +GIMVGGRLRCLGS QHLKSRFGDG  ++V +  P+T+E+DS +  +                  D + ++LA         G+ DLA  I++    G  L A +   G V      +W VG+     + ++++ +F  A   V ERQ    R ++    G + L  MF ++E  +  + I  YS+SQT+LEQIFN FASQQEEELG A G+
Sbjct:    1 SLPAFWLSNYIWDLLMYTIPCVATLVLLNVFNISALTGTDCSSCTGATFPSVILLFVLFGLAICPFSYALSFLFKEHASAQTYTIVLNFVIGMVLMITSFILDLIDSTEGVNSVLKFFWRFSPLFSLGNALLNMVNSEFDSIRSSDDGGTSPFD---PDMMGFEMIYLVFTIVFFFGLTLHLDYAKA-------------VKKTDSLESSNENFDPDYEVDEDVRQEALRVASGGADHDAVKLKELRKVYP-------GGKVAVRNLSFGLKRGECFGFLGINGAGKTTTMKMLTGDVIPTQGSATLGGFDILTQQADVRRQIGYCPQFDALFDLLSVREHLELFGAIKGVPISQLDAVVQDKILQLNLSDFEHKLAGSLSGGNKRKLSVAIAMIGNPAIIFLDEPSTGMDPVSRRFMWDVIADISTRGKESTIVLTTHSMEECEALCSTVGIMVGGRLRCLGSVQHLKSRFGDGLMIDVKLETPSTSELDSLVDRV---------------FGLDNMHIILADIEERCRDFGNADLATRITSDHPTGFNLAAAIESEGFVRAEAFISWCVGETRYDTLKNYLVGSFDSANVVVLERQNDFCRLKITESGGKVELSRMFALVEQVKSKMHIREYSVSQTTLEQIFNSFASQQEEELGVARGM 624          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: A0A7S1UDZ8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDZ8_9STRA)

HSP 1 Score: 464 bits (1195), Expect = 5.770e-148
Identity = 282/652 (43.25%), Postives = 387/652 (59.36%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAVAPSGLQIN-KDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPG----MALGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGLK 1941
            Q+VSGV+ EAYWLS +++DV  Y         +LA   +D++   E   AV LL  LYG A   F Y  S+ F K A AQV  +++ FI+G+L  L   IL+ I+ TR A  +   V R+FP F LG G+  IG + +           + +++ +A   II LA  +  Y+ + + ++R +        ++  L   +R       +L DE EI+ DV AE  RV  GGA  E + + G+R  Y        G K A++   LGIP G+CFGLLGINGAGKTTTLSILSGE AP+ G A L GHD++ +P  + RL+G+CPQFDALFE +T +EHL +Y  IKG+  + +E+  +DK  EM L+++ ++ AG YSGGNKRKLSVA +MIG P+IVFLDEPSTGMDP+ARR MW+VIS I TR  +CA+ILT+HSMEE EALC RIGIMVGGR RC+GS+QHLK ++G G  +E +++ P   E     S M V             IN +  L   L A G+   +  IS  G G  LH  ++    +P  ++A + + +     +   +  ++ G  +RE QG K+ FELP +      + L D+F VLE  +E  G+  YSL  TSLE +FN FA+QQEEE G AAGL+
Sbjct:  415 QVVSGVSYEAYWLSHWIFDVLSYQPTWLVIFGLLAAFDLDNITKGEAGNAVMLLFFLYGFAITGFTYITSYAFDKPATAQVVTLMINFIIGVLMTLAAWILEIIEDTRDANEVIQFVFRLFPTFCLGRGILWIGLQNIFEIIGIIPVDSSPFSKDVAQYDIIFLAWESVVYVTIAILMDRAMTFP-----WLRQLVFGSRMTDEEAAKL-DEAEIEDDVVAENERVASGGADNELIAIRGIRHKYA-------GGKFAVRGVSLGIPTGQCFGLLGINGAGKTTTLSILSGEFAPSRGTATLDGHDLLTDPIGVRRLIGYCPQFDALFEHLTGQEHLAMYARIKGVYESEIEKVCTDKATEMDLLKHWERTAGRYSGGNKRKLSVACAMIGEPKIVFLDEPSTGMDPLARRFMWDVISAIATRRGRCAVILTTHSMEECEALCGRIGIMVGGRFRCIGSAQHLKHKYGLGFSLEAALKLPTHDEGRELASRMGVFEED--------TINERSALEAALTAVGYEAFSKSISEEGSGGALHYQLSHGAGIPTLELAEYLLLEKNKMELEKALHDSYEGVVLREAQGKKMSFELPGEDAEGTKLQLADVFDVLEGLKESCGVQEYSLMSTSLEMVFNRFAAQQEEEKGHAAGLQ 1045          
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Match: A0A4D9DBM5_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBM5_9STRA)

HSP 1 Score: 458 bits (1179), Expect = 8.070e-147
Identity = 282/680 (41.47%), Postives = 406/680 (59.71%), Query Frame = 1
Query:    1 QMVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAVALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTL-VILQFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTVWAEPIAGRSIIMLAAMTPFYIFLTLFLERRL----------AGTTNLAAYIADLRVRAREKHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTRSGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAFLAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALLEQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEPSTGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVGGRLRCLGSSQHLKSRFGDGHQMEVSVR------PPATAEIDSALSAMA-----------VATTAGAVAP-SGLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGRDVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQP---GMA--LGDMFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGL 1938
            Q+VSGV+  +YWLS +++D   Y +P   T+ IL +    +L+  +  GA  LL+ L+G +   F Y  +F F +H+  QV  I+L F+ G++  +TL VI+ FI  TR   +   ++ R+ PPF+ G+GL  + F    +    +   YT ++  IAG S+I ++  T  Y  L L +E  +           G++++AA     +  A         L +ED +  +   +  +     A G+ V +  + K Y        G K+A++   LGIP GECFGLLG+NGAGKTTTLSIL+ E  P++G  +L G+D+   PE + RLVG+CPQFDALF+L+T +EHL LY  +KG+  A ++  V+ K+ EM L+E+A++ A  YSGGN+RKLSVA++MIG P+IV LDEPS+GMD VARR MW+VIS+I T+  +C +ILT+HSMEE EALC+RIGIMVGGR RC+GS+QHLKSR+G G+Q+E+SV        PA+ + DS                 +A   GA A  S  +    QL + LAA         IS TG GA +  T+T  G++  R+ A W   +    ++  F++  +  A +RERQG K+RFE+P +    G A  L +MFG++ED++  L +  YS+ QTSLEQIFNFFA QQEEE G AAG+
Sbjct:  237 QLVSGVSFLSYWLSTWLFDFASYQVPLWMTIVILKLFDAQALMNGKAFGATVLLMELFGTSVTGFTYLTTFSFRRHSRIQVATIMLNFMCGVVVLVTLTVIMTFIPITRDVALKLVYLFRLAPPFAAGNGLLNVVFTDFFSSLDQKQ--YTPYSLNIAGYSMIYMSVETVVYFVLVLCVEYLIRRPTVSKLLEGGSSSMAAKDCSGKDEA--------VLEEEDRVRREATMDTMK-----AGGDVVVIKDMTKTYR-------GGKLAVRGMSLGIPNGECFGLLGVNGAGKTTTLSILTAEFPPSSGQVWLGGYDIADNPEVVRRLVGYCPQFDALFDLLTGQEHLELYARVKGLSEAQVKTVVARKVMEMDLVEFANRNATTYSGGNRRKLSVAMAMIGSPQIVILDEPSSGMDAVARRFMWKVISDITTKRGECCVILTTHSMEECEALCTRIGIMVGGRFRCMGSAQHLKSRYGMGYQLEISVALPRGEIVPASDDEDSGGETEGKRMVLPADDTFLARLEGAAARLSTERFTMPQLEIALAAIDKAAWLEVISPTGTGADVWQTVTASGSIGVREFAGWCSLEDRVESILRFIMDNYPDAVLRERQGTKVRFEIPSKDTNTGAARKLSEMFGLIEDNKGRLHVEDYSVCQTSLEQIFNFFAGQQEEEKGPAAGI 894          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig632.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE9_ECTSI5.230e-19353.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZE8_ECTSI1.090e-19052.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M8_9PHAE3.110e-17848.89ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S3XYR3_HETAK2.330e-17448.62Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
D7FZA6_ECTSI2.300e-17149.24ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A7S4D9H3_HETAK5.070e-15947.46Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835YSC0_9STRA1.610e-15242.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W2KUR6_PHYPR1.490e-14942.30ABC transporter domain-containing protein (Fragmen... [more]
A0A7S1UDZ8_9STRA5.770e-14843.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DBM5_9STRA8.070e-14741.47ABC transporter domain-containing protein n=2 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig632contigP-wetherbeei_contig632:4902..7754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZE9
PFAMsABC2_membrane_3,ABC_tran
Model size1944
Max annot lvl2759|Eukaryota
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
Exons5
Evalue3.12e-193
EggNOG OGsCOG1131@1|root,KOG0059@2759|Eukaryota
DescriptionATPase activity, coupled to transmembrane movement of substances
Cds size1941
COG categoryV
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig632.3.1prot_P-wetherbeei_contig632.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig632 4902..7751 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186904.7252147-CDS-P-wetherbeei_contig632:4901..49641683186904.7252147-CDS-P-wetherbeei_contig632:4901..4964Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig632 4902..4964 -
1683186904.7353685-CDS-P-wetherbeei_contig632:5214..57871683186904.7353685-CDS-P-wetherbeei_contig632:5214..5787Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig632 5215..5787 -
1683186904.744917-CDS-P-wetherbeei_contig632:5908..60061683186904.744917-CDS-P-wetherbeei_contig632:5908..6006Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig632 5909..6006 -
1683186904.7623568-CDS-P-wetherbeei_contig632:6195..68971683186904.7623568-CDS-P-wetherbeei_contig632:6195..6897Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig632 6196..6897 -
1683186904.7737918-CDS-P-wetherbeei_contig632:7246..77511683186904.7737918-CDS-P-wetherbeei_contig632:7246..7751Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig632 7247..7751 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186904.784805-UTR-P-wetherbeei_contig632:7751..77541683186904.784805-UTR-P-wetherbeei_contig632:7751..7754Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig632 7752..7754 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig632.3.1

>prot_P-wetherbeei_contig632.3.1 ID=prot_P-wetherbeei_contig632.3.1|Name=mRNA_P-wetherbeei_contig632.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=647bp
MVSGVNLEAYWLSAYVWDVFFYTIPAGATLAILAIAGVDSLVGREEVGAV
ALLLGLYGLASPPFHYAISFLFTKHAAAQVYIILLGFILGLLAPLTLVIL
QFIDSTRSAGVLASHVLRIFPPFSLGSGLYGIGFRTLLAYFKGRADPYTV
WAEPIAGRSIIMLAAMTPFYIFLTLFLERRLAGTTNLAAYIADLRVRARE
KHLSPYQLGDEDEIDADVAAERSRVEGGGAAGEAVRVAGLRKLYPSSSTR
SGGVKVAIKSTFLGIPRGECFGLLGINGAGKTTTLSILSGETAPTAGAAF
LAGHDVMREPEAIHRLVGFCPQFDALFELMTAREHLRLYGCIKGIPAALL
EQAVSDKIQEMSLMEYADKPAGGYSGGNKRKLSVAVSMIGGPEIVFLDEP
STGMDPVARRGMWEVISNIVTRDAKCAMILTSHSMEETEALCSRIGIMVG
GRLRCLGSSQHLKSRFGDGHQMEVSVRPPATAEIDSALSAMAVATTAGAV
APSGLQINKDQLPVVLAAAGHGDLAAEISATGRGATLHATMTGRGAVPGR
DVAAWAVGDAAASAVADFVLRTFAGAAVRERQGAKLRFELPPQPGMALGD
MFGVLEDSREGLGIVSYSLSQTSLEQIFNFFASQQEEELGAAAGLK*
back to top

mRNA from alignment at P-wetherbeei_contig632:4902..7754-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig632.3.1 ID=mRNA_P-wetherbeei_contig632.3.1|Name=mRNA_P-wetherbeei_contig632.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2853bp|location=Sequence derived from alignment at P-wetherbeei_contig632:4902..7754- (Phaeothamnion wetherbeei SAG_119_79)
CAAATGGTCAGCGGAGTCAATTTGGAGGCGTACTGGCTCAGCGCTTACGT CTGGGACGTCTTCTTCTACACCATCCCCGCCGGTGCCACCTTGGCCATCC TCGCCATCGCCGGCGTCGACTCCTTGGTGGGCCGCGAGGAGGTGGGCGCC GTCGCGCTGCTGCTGGGCCTCTACGGCCTGGCGTCGCCACCGTTCCACTA CGCCATCAGCTTCCTCTTCACCAAGCACGCGGCGGCGCAGGTCTACATCA TCCTGCTGGGCTTCATCCTGGGGCTGCTAGCGCCGCTGACGCTCGTGATC CTGCAATTTATTGACAGTACGCGCAGCGCCGGCGTGTTGGCATCCCACGT GCTGCGCATCTTTCCGCCGTTCTCGCTGGGCAGCGGATTGTATGGCATCG GCTTCCGAACGCTGCTGGCGTACTTCAAGGGACGGGCGGATCCTTACACG GTCTGGGCGGAACCAATCGCCGGTCGGTCGATCATCATGCTGGCCGCCAT GACGCCGTGTAAGTTTGAGAGTTTTTTGGCGGAAGTGTAGGTCCTTGTGA CTGCGGTTGTGACTGACGTCCGGACTTTCCGTATGGCTGCGTTAAGCGAC GGTTGTGATTGGGCGACGGCCACGCTCCTGTGGCTGCTCAAAGGACAGTT AAGACTGACGGGCGGAGGCTTATTCTATGGGCGGTTCATGCAGCGGCTCT GAGCGCTGGACAGCAACTTTTGTCTGCTGCCTTTACTGAGCAGCTTCTAC ATGCCATTGAAACGGCGTCGGTCACAGCCTGACATCGATGCTTTGGCATA TGCTGTTCCCCGCTTCTATCTCTCCTTCCTTCCCCCCTCTGAAACTTGCA AGAACAGTTTACATCTTCTTGACGCTGTTCCTGGAGCGGCGCCTCGCCGG CACCACCAACTTGGCCGCCTACATTGCCGACCTCCGCGTCCGCGCCCGCG AGAAGCACCTCTCGCCGTACCAGCTCGGTGACGAGGACGAGATCGACGCC GACGTCGCTGCCGAGCGCAGCCGGGTTGAGGGTGGTGGTGCCGCCGGTGA GGCCGTCCGCGTGGCGGGACTGCGCAAGCTGTACCCGAGCAGCAGCACGC GGTCCGGCGGGGTGAAGGTCGCTATCAAAAGCACTTTCCTGGGCATTCCG CGGGGCGAGTGCTTCGGGCTGCTGGGCATCAACGGCGCGGGCAAGACGAC GACGCTCTCGATTCTGTCGGGGGAGACGGCGCCGACGGCCGGCGCCGCCT TCCTCGCTGGCCACGACGTCATGCGGGAGCCCGAGGCGATCCACCGCCTC GTCGGCTTCTGCCCGCAATTCGACGCTCTGTTCGAGCTGATGACGGCGCG CGAACACTTGCGGCTGTATGGGTGCATCAAGGGCATTCCGGCAGCGCTGC TGGAGCAAGCTGTGTCGGACAAGATTCAAGAGATGAGCCTGATGGAGTAC GCAGACAAGCCTGCCGGTGGCTACAGCGGCGGTAACAAGCGCAAATTGAG CGTTGCGGTTTCAATGATTGGCGGCCCAGAGATCGTTTTCCTCGACGAAC CCAGCACCGGTGAGAGAGGATTGAGAAAGTTTACAGACTCTGCGCTTCTC TCCCTCCTACTTCATCTTCCTTTGATCTACCTAGCTAGTGGCCTAGTGGA CGAAATAAACTGTCGTCTGTATCACTTCTCCCATAATGTGAAGTAAATAT AATTCCGATATGCAACTGCTGGCCCATGCTTGTACCGCTGCTCATCAGGC ATGGATCCCGTTGCACGGCGAGGCATGTGGGAAGTCATCTCAAATATCGT CACGCGCGACGCCAAATGTGCCATGATTCTGACATCTCATTCAATGGTGC GTCCAATGCGCGCGAGCGTTTTGCCATCATCAACATTCACCTGTTCTTCA CAAGTTCTTCTGTTATTCCGCTTAGCTGCCGTTTTGCCTTTCTTGTTCGT CGATGCCCTTGCTGCAGGAGGAAACGGAAGCTCTCTGCTCGCGGATCGGC ATCATGGTCGGCGGCCGCCTTCGATGTCTAGGCTCTTCGCAGCACCTCAA GTCGCGCTTCGGCGACGGTCACCAGATGGAAGTCTCCGTCCGGCCACCGG CAACCGCGGAGATCGACTCGGCGCTGTCTGCCATGGCCGTTGCTACCACC GCTGGCGCTGTCGCCCCCTCCGGTCTCCAAATCAACAAGGACCAGCTGCC GGTGGTGCTCGCTGCGGCGGGCCACGGCGATCTGGCGGCGGAGATCTCGG CGACCGGCCGCGGCGCCACGCTCCACGCGACGATGACGGGGCGCGGTGCC GTCCCCGGGCGGGATGTGGCGGCGTGGGCGGTCGGGGATGCCGCCGCGTC GGCCGTCGCCGACTTCGTGCTGCGGACCTTCGCTGGCGCCGCAGTAAGGG AGCGGCAGGGCGCCAAGCTGCGGTTCGAGCTGCCTCCACAGCCGGGGATG GCGCTCGGGGATATGTTCGGGGTGCTGGAGGACAGCCGGGAGGGCCTCGG CATCGTCAGCTACTCTCTGTCGCAGACGTCGCTGGAGCAGGTGCGTTCGT TTATTGGAGGAAAGAAGGTTGACTATTGTGCCAGCGAAGGTGGAGTGCTG TGGGCGGACCGGCTGTTACATGTAGGGTTTATCAACGTGGTGCTCTTCTT GGGCAGCTGACAGTGGTCAAGTCAAAGTGGTGCTTCGGCGACAGTATTTA TCCTTTTGACCATAGTCCTATTTTGGCGGTACCTGGCAACGGTTATCTAG AGCTCTACTTACGCCCACCAAAAAACGCTTTGTCGCGCAGATCTTCAATT TCTTTGCATCGCAGCAAGAGGAGGAGCTCGGGGCGGCTGCCGGGCTGAAG TAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig632:4902..7754-

>mRNA_P-wetherbeei_contig632.3.1 ID=mRNA_P-wetherbeei_contig632.3.1|Name=mRNA_P-wetherbeei_contig632.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1941bp|location=Sequence derived from alignment at P-wetherbeei_contig632:4902..7754- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCAGCGGAGTCAATTTGGAGGCGTACTGGCTCAGCGCTTACGTCTG
GGACGTCTTCTTCTACACCATCCCCGCCGGTGCCACCTTGGCCATCCTCG
CCATCGCCGGCGTCGACTCCTTGGTGGGCCGCGAGGAGGTGGGCGCCGTC
GCGCTGCTGCTGGGCCTCTACGGCCTGGCGTCGCCACCGTTCCACTACGC
CATCAGCTTCCTCTTCACCAAGCACGCGGCGGCGCAGGTCTACATCATCC
TGCTGGGCTTCATCCTGGGGCTGCTAGCGCCGCTGACGCTCGTGATCCTG
CAATTTATTGACAGTACGCGCAGCGCCGGCGTGTTGGCATCCCACGTGCT
GCGCATCTTTCCGCCGTTCTCGCTGGGCAGCGGATTGTATGGCATCGGCT
TCCGAACGCTGCTGGCGTACTTCAAGGGACGGGCGGATCCTTACACGGTC
TGGGCGGAACCAATCGCCGGTCGGTCGATCATCATGCTGGCCGCCATGAC
GCCGTTTTACATCTTCTTGACGCTGTTCCTGGAGCGGCGCCTCGCCGGCA
CCACCAACTTGGCCGCCTACATTGCCGACCTCCGCGTCCGCGCCCGCGAG
AAGCACCTCTCGCCGTACCAGCTCGGTGACGAGGACGAGATCGACGCCGA
CGTCGCTGCCGAGCGCAGCCGGGTTGAGGGTGGTGGTGCCGCCGGTGAGG
CCGTCCGCGTGGCGGGACTGCGCAAGCTGTACCCGAGCAGCAGCACGCGG
TCCGGCGGGGTGAAGGTCGCTATCAAAAGCACTTTCCTGGGCATTCCGCG
GGGCGAGTGCTTCGGGCTGCTGGGCATCAACGGCGCGGGCAAGACGACGA
CGCTCTCGATTCTGTCGGGGGAGACGGCGCCGACGGCCGGCGCCGCCTTC
CTCGCTGGCCACGACGTCATGCGGGAGCCCGAGGCGATCCACCGCCTCGT
CGGCTTCTGCCCGCAATTCGACGCTCTGTTCGAGCTGATGACGGCGCGCG
AACACTTGCGGCTGTATGGGTGCATCAAGGGCATTCCGGCAGCGCTGCTG
GAGCAAGCTGTGTCGGACAAGATTCAAGAGATGAGCCTGATGGAGTACGC
AGACAAGCCTGCCGGTGGCTACAGCGGCGGTAACAAGCGCAAATTGAGCG
TTGCGGTTTCAATGATTGGCGGCCCAGAGATCGTTTTCCTCGACGAACCC
AGCACCGGCATGGATCCCGTTGCACGGCGAGGCATGTGGGAAGTCATCTC
AAATATCGTCACGCGCGACGCCAAATGTGCCATGATTCTGACATCTCATT
CAATGGAGGAAACGGAAGCTCTCTGCTCGCGGATCGGCATCATGGTCGGC
GGCCGCCTTCGATGTCTAGGCTCTTCGCAGCACCTCAAGTCGCGCTTCGG
CGACGGTCACCAGATGGAAGTCTCCGTCCGGCCACCGGCAACCGCGGAGA
TCGACTCGGCGCTGTCTGCCATGGCCGTTGCTACCACCGCTGGCGCTGTC
GCCCCCTCCGGTCTCCAAATCAACAAGGACCAGCTGCCGGTGGTGCTCGC
TGCGGCGGGCCACGGCGATCTGGCGGCGGAGATCTCGGCGACCGGCCGCG
GCGCCACGCTCCACGCGACGATGACGGGGCGCGGTGCCGTCCCCGGGCGG
GATGTGGCGGCGTGGGCGGTCGGGGATGCCGCCGCGTCGGCCGTCGCCGA
CTTCGTGCTGCGGACCTTCGCTGGCGCCGCAGTAAGGGAGCGGCAGGGCG
CCAAGCTGCGGTTCGAGCTGCCTCCACAGCCGGGGATGGCGCTCGGGGAT
ATGTTCGGGGTGCTGGAGGACAGCCGGGAGGGCCTCGGCATCGTCAGCTA
CTCTCTGTCGCAGACGTCGCTGGAGCAGATCTTCAATTTCTTTGCATCGC
AGCAAGAGGAGGAGCTCGGGGCGGCTGCCGGGCTGAAGTAA
back to top