mRNA_P-wetherbeei_contig6313.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6313.1.1
Unique NamemRNA_P-wetherbeei_contig6313.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.280e-67
Identity = 141/331 (42.60%), Postives = 183/331 (55.29%), Query Frame = 1
Query:    1 MSMFWLDATEVEGTLYLIGKVEL----------------GEGTGVFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFE----DPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAAPAPFPPAPP--------------------------------VVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSGPAAAAKMTGWAAVRPLG 837
            M MFWLDATE  GT+YLIGKV +                G     F S CV VH+++R +LVLPR +  D  + +              +  G  GS +      V+ E++S+LVP VI R+ +GE+FR KPV R+YAF    VPR+ T YLK+KY A YP  P   CESGGK+FQ IFGART  +E+FL+KR+LMGPCW+TVR P V  +P SWC+VEV  + PK I    A    A                                  VVT+SLS+KTVV P TH +E+VA++A+VHRE +LD  +++SG     KM  W  +RPLG
Sbjct:  454 MRMFWLDATEQNGTIYLIGKVAVPSPSSGSASASPQGDSGAAGTTFLSACVAVHSIEREVLVLPRLVEKDGEYSDGDE-----------DAGGGGGSAKRADIGAVYQEMASVLVPRVIKRNAKGEQFRCKPVMRKYAFGDLSVPREETQYLKIKYPAGYPALPEDVCESGGKTFQAIFGARTPLIESFLIKRKLMGPCWITVRNPKVNNAPVSWCKVEVAAQSPKSITRLLAEEVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTMSLSMKTVVSPRTHTHEVVALSALVHREVRLDGASDESGK----KMGAWLGIRPLG 769          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A7S2UH04_9STRA (DNA polymerase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH04_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.820e-62
Identity = 123/285 (43.16%), Postives = 170/285 (59.65%), Query Frame = 1
Query:    7 MFWLDATEVEGTLYLIGKVELGEGTGV--------FGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAAPAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSGPAAAAKMTGWAAVRPLG 837
            MFW+DA E  G +YL GKVE+   +G         F S CVVV N  RSL VLPRR  G +    +      L Y    +V           H E++S+L P  IP   EG  +R KPV R+YAF    VPR+ TTY+KV+Y A+Y  P    CE GG+ F +IFGA  S +ENF+LKRRLMGPCW+ +R P+   +P SWC++E+ V +PK I+   +P    PPVVT+++ +KTVV+PSTH +E+V+++A+ H+   LD  +++S       MT  + +RPLG
Sbjct:  431 MFWIDACEKNGVVYLYGKVEVVHNSGKDNKKPQSSFVSCCVVVRNNLRSLFVLPRRKNGSDPNSGDE-----LEYESMADV-----------HKEMNSVLKPKCIPLV-EGASWRGKPVNRKYAFADISVPREETTYMKVQYDAKYDVPSPEVCEQGGQFFSKIFGAGASTLENFILKRRLMGPCWIKIRNPMPNKAPASWCKIELQVANPKDISPIVSPMRHPPPVVTMTIKIKTVVNPSTHKSEVVSVSAICHKRVLLDTASDESN----TNMTQISLIRPLG 694          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A7S3LXN8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LXN8_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.820e-59
Identity = 124/295 (42.03%), Postives = 170/295 (57.63%), Query Frame = 1
Query:    1 MSMFWLDATEVEGTLYLIGKVELGEGTGVFG-----------SVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAAPAPFP-------------------------PAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTE 777
            +++F+LDA E  G +YL GK+ + +GTG  G           SVCV VH  +R+L VLPR +P  + F E+       R G T             V+ E+SS+LVPSV+PR+ +G+ FR KPV R+YAFEH  +PR  T YLKV YSA +  P  A C SGGK+++RIFG  +SA+E FLLKR+LMGPCW+T+R P +  S  SWC+VE+ VE+PK +       P                         P P + ++SLS+KTVV+P TH +EIV ++ +VH +   D  TE
Sbjct:   16 VNIFYLDAAENNGVIYLFGKLPIQDGTGAGGVVKGEAPRKFVSVCVAVHGCERNLFVLPRSIP--DTFKEDGTPE---RVGMT------------EVYKELSSVLVPSVMPRT-QGQSFRCKPVKRKYAFEHGAIPRTETDYLKVVYSATHGVPSQAQC-SGGKTYERIFGTTSSALELFLLKRKLMGPCWVTIRKPKLNSSVVSWCKVELAVENPKDVVRVVNSGPVAAGASAGATTTAGGGINVSLADCGPNPLLTSVSLSIKTVVNPVTHMHEIVMLSGIVHNKIDADGDTE 291          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A7S1BTL0_9STRA (DNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.800e-59
Identity = 125/284 (44.01%), Postives = 157/284 (55.28%), Query Frame = 1
Query:    1 MSMFWLDATEVEGTLYLIGKVELG----EGTGVFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAAPAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSGPAAAAKMTGWAAVRPLGA 840
            + M+WLD TE    LYL GK+E+          F S C +VHN+QR LL LPR  PG++                     G   S +D VH E+  LLVP V+P +  G  F AKPV R+YAFE   VPR   TYLKV Y A++P P    CE GG   QRIFG      ENFL+KRRLMGP W+TV+ P     P +W ++E  + DPK I   P P PP PP+V ++L +KTVVHP +  +EIV ++A+ HR     H T D  P  A  +T    VRPLGA
Sbjct:   31 LRMYWLDLTEKNHDLYLFGKIEIPAEEPNAAPRFVSCCAIVHNLQRQLLCLPR--PGED---------------------GEPASMQD-VHAEVRKLLVPRVLP-ARAGCGFAAKPVTRKYAFEDPSVPRGEATYLKVVYDAKFPAPDPELCEQGGTFIQRIFGHSVGLTENFLIKRRLMGPGWVTVKNPFTTDVPSTWTKLEFHINDPKNIRRMPDPCPPVPPLVAVTLKMKTVVHPKSSQHEIVCLSAICHR-----HVTLDKRPPPADAVTQLTLVRPLGA 284          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH)

HSP 1 Score: 204 bits (520), Expect = 3.450e-56
Identity = 116/264 (43.94%), Postives = 164/264 (62.12%), Query Frame = 1
Query:    7 MFWLDATEVEGTLYLIGKVELGEGTGV----FGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPK---KIAAAPAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTE 777
            M+WLDATE+ G +YL G+V L          F S C +V   +R+L VLPR  P +             + G +  VS         V+ E+S LLVPS+IP+  +G+ F+AKPV R+YAF+H  VPRD T YLKV YSA++  P  A C+ GGKSF+ IFGA  S +E FLLKR+L GPCW+ ++AP V     SWC+VE  V++PK   K++ +    PP  P+V++ +S+KTVV+PS+H +EIVA++A++H +   +  TE
Sbjct:  213 MYWLDATELNGVIYLFGRVPLASADPKQPPRFVSCCAIVQGCERNLFVLPRAKPNE------------FKDGNSVRVSAGE------VYQEVSKLLVPSIIPKQ-QGQAFKAKPVMRKYAFDHDTVPRDNTEYLKVIYSAKHGVPTPAQCQ-GGKSFEAIFGANISPLELFLLKRQLQGPCWIHIKAPKVANDAVSWCKVEFIVDNPKNISKVSQSEDLVPP--PLVSMCVSIKTVVNPSSHLHEIVAVSALIHGKVDTEAETE 454          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 5.650e-54
Identity = 123/276 (44.57%), Postives = 165/276 (59.78%), Query Frame = 1
Query:   10 FWLDATEVEGTLYLIGKVELGEGTGVFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAAPAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSGPAAAAKMTGWAAVRPLG 837
            FW DA E  G +YL G+V +  G  +  + CV    VQ SLLVLP+R        ++      +RYG               V+ E+  LLVPSVIPR   G+ F+ KPV R YAFE  +VPR+ T YLKV YSA +  P    CE+GG+ F+RIFGART+A+E FLLKR+LMGP WL VR P    S  +  + E  V++PK I    AP PPAPP+V +S+++KTVV+P++  +E+VA++ + H     D PTE +GP    ++T   AVRPLG
Sbjct:  410 FWTDAHEQNGVIYLFGRVAIEGGRFISAACCV--QGVQHSLLVLPKRTGNAGPDGKD------VRYGMA------------EVYKEVQDLLVPSVIPRD-AGQGFKCKPVRRHYAFELEEVPREETEYLKVVYSAGHGLPSPERCEAGGRYFERIFGARTTALELFLLKRQLMGPSWLKVRGPKPAPSSATIAKFEFVVDNPKLIRRMEAP-PPAPPMVVMSVAIKTVVNPASQLHEVVAISTMTHVAVNCDGPTE-TGPHHIRQVT---AVRPLG 659          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A8J2SRJ2_9STRA (DNA polymerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRJ2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.600e-51
Identity = 114/262 (43.51%), Postives = 152/262 (58.02%), Query Frame = 1
Query:    7 MFWLDATEVEGTLYLIGKVELGEGTGVFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTT-YLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAA-PAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSG 786
            ++WLD  E  G++YL+GK+ L      + S C VV NV+RS  +LPR          +S    G RYG               V  E  S LVP  +P+S   E F+ K V R YAF   DVPRD  T YLKVKYSA+   PP++ C+ GG+  ++I GA ++ +E FL+KR+LMGPCW+ + APV   S  SWC +EV V D KKI  A   P+  APP+V  +LS+KT V+P +H +EIVA+AA+ HR   +D  T D G
Sbjct:  343 LYWLDCVEQSGSVYLLGKIRLEGEQDRYASACCVVRNVERSFFILPR---------VDS--ETGSRYGMK------------DVWEEARSELVPRCVPKS---EPFKCKGVKRGYAFGDDDVPRDADTEYLKVKYSAKNRAPPVSLCKRGGRCIEKILGAGSTPLEQFLIKRKLMGPCWVRIDAPVQRDSKVSWCVLEVEVSDAKKITVARDCPYS-APPLVCTTLSVKTAVNPKSHQHEIVAVAALTHRGVAVDGATPDGG 577          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A7S4IIV6_9STRA (DNA polymerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIV6_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.440e-49
Identity = 118/306 (38.56%), Postives = 163/306 (53.27%), Query Frame = 1
Query:    1 MSMFWLDATEVEGTLYLIGKVEL------------GEGT------GVFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAAP---------APFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSGPAAAAKMTGWAAVRPLG 837
            + +FW+DA+E  G ++L GKVE+            G  T        F S CV++H   R+L VLPRR  G E   E +                   S  D VH E+  +L P  IP++ EG  +  K V R+YAF    VPR+ + YLKV Y A+Y  P    C  GG+ F++IFGA  S +ENF++KRRLMGPCW+ ++ P       SWC++E  V  PK I             A  PP PPVVT+SL LKT+V+P TH +EIV+++A+ HR+  LD  +++S       MT  + +RPLG
Sbjct:  248 LDLFWIDASERNGVVFLFGKVEVKPQGDAAKGDKGGNNTKXXAQQSSFVSCCVMIHGNSRNLFVLPRRTGGGENGDEPA-------------------SLMD-VHNEMKRVLQPRCIPKT-EGAAWGGKVVKRKYAFHDPSVPREESQYLKVVYDAKYDVPDEDVCTGGGQHFEKIFGAGASTLENFIVKRRLMGPCWVRIKNPEASGVTRSWCKIECQVGTPKDITRLDLVEGIDRQQANRPP-PPVVTVSLKLKTIVNPKTHKSEIVSVSAIAHRKVLLDTASDES----TRHMTQLSLLRPLG 527          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.450e-49
Identity = 111/285 (38.95%), Postives = 154/285 (54.04%), Query Frame = 1
Query:    1 MSMFWLDATEVEGTLYLIGKVELGEGTG-----------VFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFE----DPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKI---------AAAPAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDS 783
            + MFWLDA+E  G +YL GKV++   T            ++ S CV + N QR+L VLPR     +A               T E    N + E      V+GE+ S+L PS IP SH G  + AKPV R YAFE   +PRD   Y+KV Y A+YP P    C +GGK+F++I GA  S +ENFL+KRRLMGP W+ +  P  P+   SWC+ E T++ PK +         A      P +PPV T+S+  KT V+P +H  EIV ++A+ +   ++D  T+ S
Sbjct:  379 IDMFWLDASERNGVVYLYGKVKVPIQTKGGAKQQKQQSFMYQSCCVTIPNNQRNLFVLPRIKTDAKA--------------STTEEDEENATVERYPISEVYGELKSVLQPSCIPHSH-GATWGAKPVTRTYAFEDPSIPRDECQYMKVVYDAKYPVPDRHVCVAGGKTFEKILGAGASNLENFLIKRRLMGPGWVRIYNPKTPMGNASWCKWECTIDGPKSLQRLDLVTNRAGERVTIPESPPVSTVSIKFKTAVNPKSHKLEIVCVSALFNSTVQIDAATDKS 648          
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Match: F0YGZ8_AURAN (DNA polymerase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGZ8_AURAN)

HSP 1 Score: 184 bits (467), Expect = 4.570e-49
Identity = 111/262 (42.37%), Postives = 145/262 (55.34%), Query Frame = 1
Query:    7 MFWLDATEVEGTLYLIGKVELGEGTGVFGSVCVVVHNVQRSLLVLPRRLPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIPRSHEGEKFRAKPVARRYAFEHTDVPRDPTT-YLKVKYSARYPPPPLAACESGGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEVTVEDPKKIAAA-PAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHREAKLDHPTEDSG 786
            M+WLD  E  G++YL+GKV+L EG   + S CVVV +V+RS  VLPR  P             G RY                V  E  + LVP  +P+      F+ K V R Y F    VPRD  T YLKVKY +++ PPP   C+ GG+  ++I GA  + +E FL+KR+LMGPCW+ V  P       SWC VEV V  PK I  A   P+  APP+V  ++SLKTVV+P TH +EIVA++A+ HR   +D  T D G
Sbjct:    1 MYWLDVVEQSGSIYLVGKVKL-EGEDAYASACVVVRDVERSFFVLPRVDP-----------ESGERYPMA------------KVWAETRAELVPRCVPKQ---APFKCKGVKRGYCFGDESVPRDDATEYLKVKYLSKFRPPPRGLCDRGGRVIEKILGAGATPLELFLVKRKLMGPCWIRVDKPKAHSPKVSWCAVEVEVASPKAITLARDCPYA-APPLVCTTISLKTVVNPKTHQHEIVAVSALTHRGVGIDGATPDGG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6313.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI10_ECTSI2.280e-6742.60DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A7S2UH04_9STRA2.820e-6243.16DNA polymerase n=1 Tax=Attheya septentrionalis Tax... [more]
A0A7S3LXN8_9STRA1.820e-5942.03Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1BTL0_9STRA2.800e-5944.01DNA polymerase (Fragment) n=1 Tax=Corethron hystri... [more]
A0A482T3C7_9ARCH3.450e-5643.94DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
A0A4D9CVK1_9STRA5.650e-5444.57DNA polymerase n=1 Tax=Nannochloropsis salina CCMP... [more]
A0A8J2SRJ2_9STRA3.600e-5143.51DNA polymerase n=1 Tax=Pelagomonas calceolata TaxI... [more]
A0A7S4IIV6_9STRA1.440e-4938.56DNA polymerase n=1 Tax=Odontella aurita TaxID=2655... [more]
A0A7S2L169_9STRA1.450e-4938.95DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=2... [more]
F0YGZ8_AURAN4.570e-4942.37DNA polymerase n=1 Tax=Aureococcus anophagefferens... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6313contigP-wetherbeei_contig6313:583..2099 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FI10
Preferred namePOLA1
PFAMsDNA_pol_B,DNA_pol_B_exo1,DNA_pol_alpha_N,zf-DNA_Pol
Model size844
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K02320
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000083,GO:0000166,GO:0000228,GO:0000278,GO:0000428,GO:0000723,GO:0000726,GO:0000731,GO:0000734,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005657,GO:0005658,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006271,GO:0006272,GO:0006273,GO:0006278,GO:0006279,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006312,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009653,GO:0009889,GO:0009965,GO:0009987,GO:0010016,GO:0010468,GO:0010556,GO:0012505,GO:0016043,GO:0016070,GO:0016363,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019103,GO:0019219,GO:0019222,GO:0019438,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022413,GO:0022414,GO:0022616,GO:0030154,GO:0030880,GO:0030894,GO:0031323,GO:0031326,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032505,GO:0032774,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034061,GO:0034062,GO:0034399,GO:0034641,GO:0034645,GO:0034654,GO:0035822,GO:0035861,GO:0036094,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0045165,GO:0046483,GO:0046982,GO:0046983,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051321,GO:0051716,GO:0055029,GO:0060249,GO:0060255,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090734,GO:0097159,GO:0097747,GO:0098687,GO:0099402,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902292,GO:1902295,GO:1902315,GO:1902318,GO:1902494,GO:1902969,GO:1902975,GO:1902981,GO:1903046,GO:1903047,GO:1903506,GO:1905392,GO:1990234,GO:1990837,GO:2000112,GO:2001141
Exons4
Evalue3.74e-68
EggNOG OGsCOG0417@1|root,KOG0970@2759|Eukaryota
EC2.7.7.7
Descriptionleading strand elongation
Cds size843
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186904.2684681-CDS-P-wetherbeei_contig6313:582..10261683186904.2684681-CDS-P-wetherbeei_contig6313:582..1026Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6313 583..1026 -
1683186904.283409-CDS-P-wetherbeei_contig6313:1394..15381683186904.283409-CDS-P-wetherbeei_contig6313:1394..1538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6313 1395..1538 -
1683186904.2923415-CDS-P-wetherbeei_contig6313:1735..18251683186904.2923415-CDS-P-wetherbeei_contig6313:1735..1825Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6313 1736..1825 -
1683186904.3006861-CDS-P-wetherbeei_contig6313:1934..20991683186904.3006861-CDS-P-wetherbeei_contig6313:1934..2099Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6313 1935..2099 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6313.1.1prot_P-wetherbeei_contig6313.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6313 583..2099 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6313.1.1

>prot_P-wetherbeei_contig6313.1.1 ID=prot_P-wetherbeei_contig6313.1.1|Name=mRNA_P-wetherbeei_contig6313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
MSMFWLDATEVEGTLYLIGKVELGEGTGVFGSVCVVVHNVQRSLLVLPRR
LPGDEAFCEESLFSPGLRYGKTGEVSGANGSFEDPVHGEISSLLVPSVIP
RSHEGEKFRAKPVARRYAFEHTDVPRDPTTYLKVKYSARYPPPPLAACES
GGKSFQRIFGARTSAVENFLLKRRLMGPCWLTVRAPVVPVSPCSWCRVEV
TVEDPKKIAAAPAPFPPAPPVVTLSLSLKTVVHPSTHANEIVAMAAVVHR
EAKLDHPTEDSGPAAAAKMTGWAAVRPLGAA
back to top

mRNA from alignment at P-wetherbeei_contig6313:583..2099-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6313.1.1 ID=mRNA_P-wetherbeei_contig6313.1.1|Name=mRNA_P-wetherbeei_contig6313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1517bp|location=Sequence derived from alignment at P-wetherbeei_contig6313:583..2099- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCATGTTCTGGCTGGACGCGACAGAGGTGGAGGGCACGCTCTACCT GATCGGCAAGGTGGAATTGGGCGAGGGCACCGGCGTCTTCGGGTCGGTGT GCGTGGTAGTGCACAACGTGCAGCGCTCGCTGCTCGTGCTGCCGCGCCGC CTACCGGGCGACGAGGTCGACGCCGACGGCCGCCCGGCGCGCGCCGGCAT CATGGGCGTGAGTTCGTTGCGGCTTCCCGTTCTTTCCTTTCGGTGCTTGC TTCTTCTCTGTGATCACGGAGGAGGCGTTTTGTGAAGAATCCTTGTTCTC TCCTGGGCTGCGATACGGAAAAACTGGAGAGGTTTCTGGGGCAAATGGTT CTTTTGAAGATCCGGTTTGCCGTGTTGGCCGCTTTTTCACTGCCGTTTGG GCGGTGGCGTGGTGGCCCTAAGCCGGGCGATCGCAATGCTCCATTTCCGC TTTTGCTTTGTTTGAATCAAGTTGAATCTTCCGTACCGCGTTTCTTCTCC TCTCCTTTGCTGTTCTCCCGCGCTGCCTGCCGCCCGCCCATGCGCCCTTT GAGGCAAACAGGTCCACGGCGAGATCTCGTCGCTGCTGGTGCCCTCGGTG ATCCCGCGGTCACACGAGGGGGAGAAGTTCCGCGCCAAGCCCGTCGCCCG CCGCTACGCCTTCGAACACACAGACGTGCCGCGCGACCCCACCACCTACC TCAAGGTAAAGAACGGGCATAAGAAGACAGGGACAAGGAGACGGCTGTGG AAGCTGCTGGTGGCTGCGATTTGTGGTGCGGCAGGCTTTTCGTTTGTCAT TAGGTCGAGGTCGGGTTCGCGCGTCCGGTGCGGCTGGAGATTTAGTCGAT GGAATTGAACCGGCGGCATTGATAGCTGCGCCGAGCCTTCAGGCACCCTT TCAGTGGCATTGTTTCCGCTACCAATTTTTGAAGTGTCCTTTCAAATCAT TTTGTGCTTATTGCGCTTGCCTCTTTAAGCTGCTGCCCTCGCAATTTCTC CTGCCCTCAATTGCGCCCGTTGCTAAACCCTTCCTGCAACCGCCCCAACC GCCACTCCCACCTTTCATTCCAGGTCAAGTACTCGGCGCGGTACCCGCCG CCGCCCCTCGCGGCCTGTGAATCGGGCGGCAAGTCCTTCCAGCGCATCTT CGGCGCCCGTACGTCGGCCGTCGAGAACTTCCTGCTCAAGCGCCGTCTCA TGGGGCCCTGCTGGCTGACGGTGCGCGCACCGGTGGTGCCCGTGTCGCCC TGCAGCTGGTGCCGCGTCGAGGTGACAGTGGAGGACCCTAAGAAGATCGC GGCGGCACCGGCGCCGTTCCCGCCGGCGCCGCCGGTGGTGACGCTCTCGC TGAGCCTGAAGACGGTCGTGCACCCGTCGACGCACGCCAATGAGATCGTG GCCATGGCGGCCGTCGTGCACCGCGAGGCGAAGCTCGACCACCCGACGGA AGACAGTGGACCCGCCGCCGCCGCTAAGATGACCGGCTGGGCGGCGGTGC GGCCGCTGGGGGCGGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6313:583..2099-

>mRNA_P-wetherbeei_contig6313.1.1 ID=mRNA_P-wetherbeei_contig6313.1.1|Name=mRNA_P-wetherbeei_contig6313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig6313:583..2099- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCATGTTCTGGCTGGACGCGACAGAGGTGGAGGGCACGCTCTACCT
GATCGGCAAGGTGGAATTGGGCGAGGGCACCGGCGTCTTCGGGTCGGTGT
GCGTGGTAGTGCACAACGTGCAGCGCTCGCTGCTCGTGCTGCCGCGCCGC
CTACCGGGCGACGAGGCGTTTTGTGAAGAATCCTTGTTCTCTCCTGGGCT
GCGATACGGAAAAACTGGAGAGGTTTCTGGGGCAAATGGTTCTTTTGAAG
ATCCGGTCCACGGCGAGATCTCGTCGCTGCTGGTGCCCTCGGTGATCCCG
CGGTCACACGAGGGGGAGAAGTTCCGCGCCAAGCCCGTCGCCCGCCGCTA
CGCCTTCGAACACACAGACGTGCCGCGCGACCCCACCACCTACCTCAAGG
TCAAGTACTCGGCGCGGTACCCGCCGCCGCCCCTCGCGGCCTGTGAATCG
GGCGGCAAGTCCTTCCAGCGCATCTTCGGCGCCCGTACGTCGGCCGTCGA
GAACTTCCTGCTCAAGCGCCGTCTCATGGGGCCCTGCTGGCTGACGGTGC
GCGCACCGGTGGTGCCCGTGTCGCCCTGCAGCTGGTGCCGCGTCGAGGTG
ACAGTGGAGGACCCTAAGAAGATCGCGGCGGCACCGGCGCCGTTCCCGCC
GGCGCCGCCGGTGGTGACGCTCTCGCTGAGCCTGAAGACGGTCGTGCACC
CGTCGACGCACGCCAATGAGATCGTGGCCATGGCGGCCGTCGTGCACCGC
GAGGCGAAGCTCGACCACCCGACGGAAGACAGTGGACCCGCCGCCGCCGC
TAAGATGACCGGCTGGGCGGCGGTGCGGCCGCTGGGGGCGGCG
back to top