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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 3043 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 3042 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186903.747555-CDS-P-wetherbeei_contig6308:60..1611 | 1683186903.747555-CDS-P-wetherbeei_contig6308:60..1611 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6308 61..1611 + |
| 1683186903.7606165-CDS-P-wetherbeei_contig6308:1920..3411 | 1683186903.7606165-CDS-P-wetherbeei_contig6308:1920..3411 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig6308 1921..3411 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6308.1.1 >prot_P-wetherbeei_contig6308.1.1 ID=prot_P-wetherbeei_contig6308.1.1|Name=mRNA_P-wetherbeei_contig6308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1014bp
DIRRFFANKATTLSPVDGTPSGGAVGGAIAAAPASTPVAENAMQPSPRTT
PQPTSTMEYELESVVADGLALIVALPPVAVLGRDTNLVSHLPQPGAPEKL
QLGIPVSENGVSRSQALLTVDAASGEVTLSNSASVNNPVRVRHAAAGRSA
ILLLPGNSEPLQVDDEFDLDGWRKVPRYAFRLGRRSLARSNSHQVHSSMA
VRKRAASRMLEGAGDVVPAPTPSAGAALGVTAAATTAAAEGGAAAAVMPG
AVVPGTAYKKARSESDCPEPLTQTKAIEPMDLSDDSENVAIAAVPDIALL
TGRAAMAAAALRASPVKVKSEAGGAAGQDQRSSLQLPMTQPEVIDLMDLS
SDDDAAPSPRGNAGAFAIAAPAAEAAVDDLVAAADGDAAMRAGMVIDNAN
VAAATGSPTPPPPPPDSVDGAAAMDAAELGEPVCSVVNPGQAAAPTKVPV
VTTVVAPAPASAAEVVPTTIVPQGGATSAVDVEVGDVVMLGMQSSQGPNE
EGGAVRTLEVLSDGFYKVERVIGTKTVLRVFRDLLANTVESGADNNPGAQ
HPSRVAGKIESSGATAASAAASAAAAAAAAAAAAAPTVAAAARSPFGGSS
SGSSPVTDVRAARGSNNRAVSPLSSPRSARPLARALTAALAPRGRGNDNT
AAADAAVSWPTPGGRIKVLCEVGSLERWYLGTVEIADRAGGQVSIFFDDG
SDRDWQPFPDDDIAPCGDDHVVKEEASAEAAAVAAVSRIPVDQQVGGLDL
GKRLTCGRFMALAKLAPEKLVGLWFDYRFERFGWWRGTVVRVEERGEALS
ATVSYRSLKDKDEDEDVKHHFYSHLVATLFKWEELLKQVRKKQKSGGIGT
PAASQAAAPSMTPQRGSSAGRSGGSAGSGGEEEEPAWEGEAEDVSMEAEE
ASWEPDTRSSGKSPAAVRKRRSSGPRRAPAVGRPSVGRTARGAKKLVRAA
GMAAAAAVADHDDYTDDLDVAGETHCFRCDQVFKVGHDVDDVSRHLTECK
RIHDRKRAETEEQK back to topmRNA from alignment at P-wetherbeei_contig6308:61..3411+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig6308.1.1 ID=mRNA_P-wetherbeei_contig6308.1.1|Name=mRNA_P-wetherbeei_contig6308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3351bp|location=Sequence derived from alignment at P-wetherbeei_contig6308:61..3411+ (Phaeothamnion wetherbeei SAG_119_79)
GACATTCGTCGCTTCTTTGCAAACAAGGCAACGACGCTGTCTCCAGTGGA
TGGCACCCCTTCAGGAGGGGCCGTGGGTGGAGCGATTGCGGCGGCGCCCG
CGTCAACGCCAGTTGCAGAAAATGCCATGCAACCCTCGCCGCGGACGACA
CCACAGCCAACCTCCACCATGGAGTACGAGCTGGAGTCGGTCGTCGCCGA
TGGCCTGGCCTTAATCGTCGCCTTGCCGCCTGTGGCTGTGCTCGGCCGAG
ACACAAACCTCGTCTCGCACCTGCCGCAGCCCGGGGCCCCAGAGAAGCTG
CAGCTGGGCATTCCGGTGTCGGAGAACGGCGTCAGCCGCAGCCAGGCGCT
CCTCACTGTCGACGCTGCCTCCGGCGAGGTCACCCTCTCGAATTCTGCCT
CTGTCAACAACCCCGTTCGGGTCCGGCACGCCGCCGCCGGCAGATCAGCG
ATTCTGCTTCTCCCGGGCAACAGCGAGCCGCTGCAGGTTGACGACGAGTT
CGATCTGGACGGCTGGCGCAAAGTGCCGCGGTACGCGTTCCGCCTCGGCC
GCCGGTCGTTGGCCCGAAGCAACTCCCATCAGGTGCACTCCTCGATGGCG
GTGCGCAAGCGGGCGGCCTCCCGCATGCTCGAGGGTGCGGGCGACGTCGT
GCCGGCACCAACGCCGTCCGCAGGAGCGGCGCTCGGGGTGACGGCGGCAG
CAACAACAGCAGCGGCAGAGGGCGGGGCGGCTGCGGCTGTAATGCCAGGC
GCCGTCGTGCCAGGAACGGCTTACAAGAAGGCCCGATCGGAGAGCGACTG
CCCCGAGCCGCTGACGCAGACCAAGGCGATCGAGCCGATGGACTTGAGCG
ACGACAGCGAAAATGTCGCCATCGCCGCCGTGCCTGACATTGCCTTGCTG
ACGGGACGAGCCGCGATGGCGGCGGCGGCGTTACGCGCTTCGCCTGTAAA
GGTCAAGTCGGAGGCAGGAGGAGCGGCAGGGCAGGACCAAAGATCGTCGC
TGCAATTGCCGATGACGCAGCCCGAGGTGATCGACCTCATGGATCTTAGC
AGCGATGACGACGCCGCGCCGTCGCCACGAGGGAACGCGGGTGCGTTCGC
CATCGCAGCTCCTGCTGCGGAGGCGGCGGTAGATGACCTGGTGGCCGCGG
CTGATGGCGATGCGGCGATGAGGGCAGGCATGGTCATTGACAACGCCAAT
GTCGCTGCTGCCACCGGTTCGCCGACGCCGCCACCGCCGCCGCCTGACAG
CGTGGACGGTGCAGCCGCAATGGACGCCGCGGAACTAGGGGAGCCTGTTT
GCTCCGTGGTGAATCCCGGCCAAGCAGCAGCGCCGACGAAGGTGCCAGTA
GTGACAACGGTCGTAGCACCAGCACCAGCGTCAGCAGCTGAGGTGGTGCC
GACGACAATCGTGCCGCAGGGCGGTGCTACCAGCGCTGTGGACGTCGAAG
TGGGCGACGTGGTGATGCTTGGGATGCAGAGCAGCCAGGGGCCGAACGAG
GAGGGTGGCGCCGTTCGCACACTGGAGGTCCTCTCCGATGGGTTCTACAA
GGTAAGCACAGGCTTTGCCGCTTCCCTCTTTTTTCTTTCTTCTGTGCTAG
TTTTTAATGTCAACTCTCTTTCCTTCGAGCGAAGGCACTTTCTGTGGAGC
AAACGTTGGTTCCTCTAAAAGCTTCAGTTGTTGTTTTCCTTGGGGCGATT
TGCTGTCTCGCGAGTAACTTCGTTGGGAAGTATCTTGTTTCTTTCGGAGC
AACGTTGACAATTGATGGGTTTCGATATCTTATCACACAAATCCTTAAAT
TCTTGCTTATGCTAAAAGGAAATCTCTTCTCATGTCTTTCCGCCCCTTGC
CGAAAAACAGGTGGAGCGCGTCATCGGTACTAAGACGGTGCTGCGCGTGT
TTCGCGATCTGCTCGCCAACACGGTAGAGAGCGGCGCCGACAACAACCCC
GGCGCCCAACACCCGAGCCGGGTCGCCGGAAAGATAGAGTCCAGCGGCGC
CACCGCCGCTTCTGCCGCCGCCTCCGCTGCCGCCGCCGCTGCCGCCGCCG
CCGCCGCAGCGGCGCCCACAGTTGCGGCGGCGGCTCGCAGCCCATTCGGC
GGCAGCTCCTCTGGCAGCAGTCCGGTCACCGACGTGCGCGCCGCCAGGGG
TTCCAACAACCGCGCGGTCAGCCCACTGTCCTCGCCCCGGAGCGCGCGCC
CGCTCGCTCGCGCCTTGACCGCGGCTTTGGCGCCCAGAGGCCGCGGCAAT
GACAATACCGCGGCCGCCGATGCAGCGGTGTCATGGCCGACCCCCGGTGG
CCGCATCAAGGTGCTGTGCGAGGTCGGTTCGTTGGAGCGGTGGTATCTGG
GCACCGTGGAGATTGCCGACCGGGCCGGCGGGCAGGTCAGCATCTTTTTC
GACGACGGCAGCGACCGCGATTGGCAGCCGTTCCCCGACGACGACATCGC
GCCGTGCGGCGATGATCACGTCGTGAAGGAAGAAGCCTCGGCGGAAGCGG
CGGCGGTGGCGGCGGTGTCGAGGATCCCGGTGGACCAGCAAGTAGGGGGG
CTCGACCTGGGGAAGCGGCTGACGTGCGGTCGGTTCATGGCGCTGGCGAA
GCTGGCGCCCGAAAAGCTCGTCGGCCTGTGGTTCGACTATAGGTTTGAGC
GCTTTGGCTGGTGGCGAGGCACCGTCGTTCGGGTGGAGGAGCGCGGCGAG
GCGCTGTCGGCGACGGTCAGCTACCGGAGCCTGAAAGACAAGGACGAAGA
TGAAGATGTGAAACATCACTTTTACTCCCACCTTGTCGCAACGCTTTTCA
AGTGGGAAGAGCTCCTGAAGCAGGTAAGGAAGAAGCAAAAGTCGGGTGGC
ATAGGGACACCAGCAGCATCGCAAGCAGCCGCTCCTTCGATGACGCCGCA
GCGAGGCAGCAGCGCCGGCCGGAGCGGTGGCAGCGCCGGCAGCGGCGGCG
AAGAAGAAGAGCCCGCATGGGAGGGCGAGGCGGAGGACGTGTCTATGGAG
GCAGAAGAGGCAAGCTGGGAGCCGGACACCCGCTCTTCGGGCAAATCTCC
GGCAGCGGTCCGCAAGAGGCGCTCCTCCGGGCCCAGGCGGGCTCCAGCGG
TCGGGCGGCCAAGCGTGGGCCGCACGGCTCGTGGAGCTAAAAAGCTCGTG
CGCGCGGCAGGGATGGCAGCCGCGGCTGCTGTGGCCGACCATGACGATTA
TACGGACGATCTGGACGTGGCAGGCGAAACGCACTGTTTCCGCTGCGATC
AGGTCTTCAAGGTGGGCCACGACGTGGACGATGTCAGTCGCCACCTCACG
GAGTGCAAGCGGATCCACGATAGAAAGCGGGCCGAGACAGAAGAGCAGAA
G back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig6308:61..3411+ >mRNA_P-wetherbeei_contig6308.1.1 ID=mRNA_P-wetherbeei_contig6308.1.1|Name=mRNA_P-wetherbeei_contig6308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3042bp|location=Sequence derived from alignment at P-wetherbeei_contig6308:61..3411+ (Phaeothamnion wetherbeei SAG_119_79)
GACATTCGTCGCTTCTTTGCAAACAAGGCAACGACGCTGTCTCCAGTGGA
TGGCACCCCTTCAGGAGGGGCCGTGGGTGGAGCGATTGCGGCGGCGCCCG
CGTCAACGCCAGTTGCAGAAAATGCCATGCAACCCTCGCCGCGGACGACA
CCACAGCCAACCTCCACCATGGAGTACGAGCTGGAGTCGGTCGTCGCCGA
TGGCCTGGCCTTAATCGTCGCCTTGCCGCCTGTGGCTGTGCTCGGCCGAG
ACACAAACCTCGTCTCGCACCTGCCGCAGCCCGGGGCCCCAGAGAAGCTG
CAGCTGGGCATTCCGGTGTCGGAGAACGGCGTCAGCCGCAGCCAGGCGCT
CCTCACTGTCGACGCTGCCTCCGGCGAGGTCACCCTCTCGAATTCTGCCT
CTGTCAACAACCCCGTTCGGGTCCGGCACGCCGCCGCCGGCAGATCAGCG
ATTCTGCTTCTCCCGGGCAACAGCGAGCCGCTGCAGGTTGACGACGAGTT
CGATCTGGACGGCTGGCGCAAAGTGCCGCGGTACGCGTTCCGCCTCGGCC
GCCGGTCGTTGGCCCGAAGCAACTCCCATCAGGTGCACTCCTCGATGGCG
GTGCGCAAGCGGGCGGCCTCCCGCATGCTCGAGGGTGCGGGCGACGTCGT
GCCGGCACCAACGCCGTCCGCAGGAGCGGCGCTCGGGGTGACGGCGGCAG
CAACAACAGCAGCGGCAGAGGGCGGGGCGGCTGCGGCTGTAATGCCAGGC
GCCGTCGTGCCAGGAACGGCTTACAAGAAGGCCCGATCGGAGAGCGACTG
CCCCGAGCCGCTGACGCAGACCAAGGCGATCGAGCCGATGGACTTGAGCG
ACGACAGCGAAAATGTCGCCATCGCCGCCGTGCCTGACATTGCCTTGCTG
ACGGGACGAGCCGCGATGGCGGCGGCGGCGTTACGCGCTTCGCCTGTAAA
GGTCAAGTCGGAGGCAGGAGGAGCGGCAGGGCAGGACCAAAGATCGTCGC
TGCAATTGCCGATGACGCAGCCCGAGGTGATCGACCTCATGGATCTTAGC
AGCGATGACGACGCCGCGCCGTCGCCACGAGGGAACGCGGGTGCGTTCGC
CATCGCAGCTCCTGCTGCGGAGGCGGCGGTAGATGACCTGGTGGCCGCGG
CTGATGGCGATGCGGCGATGAGGGCAGGCATGGTCATTGACAACGCCAAT
GTCGCTGCTGCCACCGGTTCGCCGACGCCGCCACCGCCGCCGCCTGACAG
CGTGGACGGTGCAGCCGCAATGGACGCCGCGGAACTAGGGGAGCCTGTTT
GCTCCGTGGTGAATCCCGGCCAAGCAGCAGCGCCGACGAAGGTGCCAGTA
GTGACAACGGTCGTAGCACCAGCACCAGCGTCAGCAGCTGAGGTGGTGCC
GACGACAATCGTGCCGCAGGGCGGTGCTACCAGCGCTGTGGACGTCGAAG
TGGGCGACGTGGTGATGCTTGGGATGCAGAGCAGCCAGGGGCCGAACGAG
GAGGGTGGCGCCGTTCGCACACTGGAGGTCCTCTCCGATGGGTTCTACAA
GGTGGAGCGCGTCATCGGTACTAAGACGGTGCTGCGCGTGTTTCGCGATC
TGCTCGCCAACACGGTAGAGAGCGGCGCCGACAACAACCCCGGCGCCCAA
CACCCGAGCCGGGTCGCCGGAAAGATAGAGTCCAGCGGCGCCACCGCCGC
TTCTGCCGCCGCCTCCGCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGCAG
CGGCGCCCACAGTTGCGGCGGCGGCTCGCAGCCCATTCGGCGGCAGCTCC
TCTGGCAGCAGTCCGGTCACCGACGTGCGCGCCGCCAGGGGTTCCAACAA
CCGCGCGGTCAGCCCACTGTCCTCGCCCCGGAGCGCGCGCCCGCTCGCTC
GCGCCTTGACCGCGGCTTTGGCGCCCAGAGGCCGCGGCAATGACAATACC
GCGGCCGCCGATGCAGCGGTGTCATGGCCGACCCCCGGTGGCCGCATCAA
GGTGCTGTGCGAGGTCGGTTCGTTGGAGCGGTGGTATCTGGGCACCGTGG
AGATTGCCGACCGGGCCGGCGGGCAGGTCAGCATCTTTTTCGACGACGGC
AGCGACCGCGATTGGCAGCCGTTCCCCGACGACGACATCGCGCCGTGCGG
CGATGATCACGTCGTGAAGGAAGAAGCCTCGGCGGAAGCGGCGGCGGTGG
CGGCGGTGTCGAGGATCCCGGTGGACCAGCAAGTAGGGGGGCTCGACCTG
GGGAAGCGGCTGACGTGCGGTCGGTTCATGGCGCTGGCGAAGCTGGCGCC
CGAAAAGCTCGTCGGCCTGTGGTTCGACTATAGGTTTGAGCGCTTTGGCT
GGTGGCGAGGCACCGTCGTTCGGGTGGAGGAGCGCGGCGAGGCGCTGTCG
GCGACGGTCAGCTACCGGAGCCTGAAAGACAAGGACGAAGATGAAGATGT
GAAACATCACTTTTACTCCCACCTTGTCGCAACGCTTTTCAAGTGGGAAG
AGCTCCTGAAGCAGGTAAGGAAGAAGCAAAAGTCGGGTGGCATAGGGACA
CCAGCAGCATCGCAAGCAGCCGCTCCTTCGATGACGCCGCAGCGAGGCAG
CAGCGCCGGCCGGAGCGGTGGCAGCGCCGGCAGCGGCGGCGAAGAAGAAG
AGCCCGCATGGGAGGGCGAGGCGGAGGACGTGTCTATGGAGGCAGAAGAG
GCAAGCTGGGAGCCGGACACCCGCTCTTCGGGCAAATCTCCGGCAGCGGT
CCGCAAGAGGCGCTCCTCCGGGCCCAGGCGGGCTCCAGCGGTCGGGCGGC
CAAGCGTGGGCCGCACGGCTCGTGGAGCTAAAAAGCTCGTGCGCGCGGCA
GGGATGGCAGCCGCGGCTGCTGTGGCCGACCATGACGATTATACGGACGA
TCTGGACGTGGCAGGCGAAACGCACTGTTTCCGCTGCGATCAGGTCTTCA
AGGTGGGCCACGACGTGGACGATGTCAGTCGCCACCTCACGGAGTGCAAG
CGGATCCACGATAGAAAGCGGGCCGAGACAGAAGAGCAGAAG back to top
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